Arvicola amphibius (Eurasian water vole): 119807769
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Entry
119807769 CDS
T08327
Symbol
Usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119807769 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamp03041
]
119807769 (Usp39)
Spliceosome [BR:
aamp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
119807769 (Usp39)
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GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
119807769
NCBI-ProteinID:
XP_038175831
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Position
2:75374258..75405716
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AA seq
564 aa
AA seq
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MSSRSKRQSHGSTRGKRESESRGSSGRIKKERDREREPEAANSRASPVRVKREAEPSARE
VPASAPPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFE
KLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEI
IDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQ
ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ
AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP
HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK
FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR
EYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQM
ITLSEAYIQIWKRRDNDETNQQGA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccggtctaaacggcagtctcatggttccactcgtgggaagcgcgaatccgag
tcgcggggtagctcgggtcgcatcaagaaggagcgagaccgcgagcgggagcccgaggcg
gcgaactcccgggccagcccggtccgcgtgaagcgggaagccgagccgagtgcgcgggag
gttccggcgtccgcgcccccggcagtgagggtgaagcgggagcgcgaggccgacgaggac
tcggagcccgagcgggaggtgcgagcaaagaatggccgagtggattcagaggaccggagg
agtcgtcactgcccatatctggataccattaacaggagtgtgctggacttcgactttgag
aaactctgctctatctccctctcgcatatcaatgcctacgcctgtctggtgtgtggcaag
tactttcaaggccggggcttgaagtctcatgcctatattcacagcgtccagttcagccac
catgtcttcctcaacctccacactctcaagttttactgccttcctgacaactatgagatc
atcgattcctcactggaggacatcacatatgtgttgaagcctactttcacaaagcagcaa
attgcaaacttggacaagcaagccaaattgtcccgggcatatgatggtaccacttacctg
ccagggatcgtgggactgaacaacataaaagccaacgactatgcaaatgcagtgttgcag
gctctgtctaatgttcctcctcttcggaattacttcctggaggaagacaattataagaac
atcaagcgccctccaggggatattatgtttttattggtccagcgttttggagagctgatg
agaaagctctggaacccccgaaacttcaaggcacatgtttctcctcatgagatgcttcag
gctgttgtcctttgcagcaagaagacttttcagatcaccaaacaaggggatggagttgac
ttcctgtcttggtttctgaatgctctgcactcggctctgggcggcaccaagaagaagaag
aagactattgtgactgatgttttccaggggtcaatgagaatcttcactaaaaagcttcct
catcctgatctgccagcggaagagaaagaacagctgctccataatgatgagtaccaagag
acaatggtggagtccacattcatgtacctgacgctggaccttcccaccgccccactctat
aaggatgagaaggagcagctcattatcccccaggtgccgctcttcaacatcctggccaag
ttcaacggcatcactgagaaggaatacaaaacttacaaggagaatttcctgaagcgcttc
cagctcaccaagctgcctccatatctaatcttttgcatcaagagatttactaagaacaac
ttctttgtggagaagaacccgacaattgtcaacttccccatcacaaatgtggatctaaga
gaatacttgtctgaagaagtccaagcagtccacaagaacaccacttatgatctcatcgcc
aacatcgtgcatgatggcaagccctccgagggctcctataggatccacgtgcttcatcat
ggaaccggcaagtggtatgaattacaagacctccaggtgactgacatcctgccccagatg
atcacactgtccgaggcgtacattcagatttggaagaggcgggataatgatgaaaccaac
cagcagggggcttga
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