Arvicola amphibius (Eurasian water vole): 119807833
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Entry
119807833 CDS
T08327
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040
Spliceosome
aamp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119807833
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119807833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119807833
03041 Spliceosome [BR:
aamp03041
]
119807833
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119807833
mRNA cycle factors
Common to processing body (P body) and stress granule
119807833
Spliceosome [BR:
aamp03041
]
Common components
Common spliceosomal components
hnRNP proteins
119807833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
119807833
NCBI-ProteinID:
XP_038175926
LinkDB
All DBs
Position
2:complement(134352312..134353475)
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AA seq
373 aa
AA seq
DB search
MSKSESPKEPAQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIREDTEEHH
LRDYFEQYGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHPVNGHNSEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGXGGNFSGCGGFGGSRGGGGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSIDNYNNGGGRGGFG
GGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGG
SSSSSSYGRGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtcagagtctcccaaggagccggcacagctgcggaagctcttcattggaggg
ctgagcttcgaaaccaccgacgagagtctgaggagccattttgagcaatggggaacactc
acggactgcgtggtcatgagagatccaaacaccaaacgatccaggggctttgggtttgtt
acgtacgccactgtggaggaagtagatgccgctatgaatgcgagaccccataaggtggat
ggaagagttgtggaacccaagagagctgtgtcgagagaggattctcagagaccgggtgcc
cacttaaccgtgaaaaagatctttgttggtggtattagagaagacacggaagaacatcac
ctgagagattattttgagcagtatgggaagattgaagtgactgaaatcatgactgacaga
ggcagtggaaaaaagagagggtttgcttttgtcacctttgatgaccatgactccgtggac
aagattgtcattcagaaataccatcctgtgaacgggcacaactctgaagtaagaaaagcc
ctatccaagcaggagatggctagtgcttcgtccagccaaagaggtcgaagtggttctgga
aacttcggtggtggtcgtggaggcggttttggcggcaatgacaattttggttgaggggga
aacttcagtggttgtggtggcttcggtggcagccgtggtggtggtggatacggtggcagt
ggggatggctataatggattcggtaatgatggtggttatggaggaggcggccctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtggcagcattgacaactataacaatggaggaggcagaggcggctttggc
ggtggtagtggaagcaattttggaggtggtggaagctacaatgattttggcaattacaac
aatcagtcttcaaattttggaccaatgaaaggaggaaactttggcggcagaagctctggc
ccttatggtggaggaggccagtactttgctaaaccacgaaatcaaggtggctatggtggt
tccagcagcagcagcagctatggcaggggcaggaggttctaa
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