Arvicola amphibius (Eurasian water vole): 119808039
Help
Entry
119808039 CDS
T08327
Symbol
Tapbpl
Name
(RefSeq) tapasin-related protein
KO
K28445
tapasin-related protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04612
Antigen processing and presentation
aamp05163
Human cytomegalovirus infection
aamp05168
Herpes simplex virus 1 infection
aamp05169
Epstein-Barr virus infection
aamp05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
119808039 (Tapbpl)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
119808039 (Tapbpl)
05168 Herpes simplex virus 1 infection
119808039 (Tapbpl)
05163 Human cytomegalovirus infection
119808039 (Tapbpl)
05169 Epstein-Barr virus infection
119808039 (Tapbpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
C1-set
Ig_3
Ig_2
I-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
119808039
NCBI-ProteinID:
XP_038176285
LinkDB
All DBs
Position
2:24222335..24230348
Genome browser
AA seq
511 aa
AA seq
DB search
MVSGQATKSVEVKAKEKPTEIQQRKRAQAASQARGALKNPLFSRGSVPEEPWRRQPARRS
LRAASMGSEPSWCLLLCLALSGAAGTEPPTAERPWQPTDIVLDCFLVTEDRHRGAFASKG
DRERALLVLKQVPVPDDGSLDDITDFQASTVAKDDPPVIFEASVDLVQIPQAEALLHADC
NGKVVTCEISQYFLQTGPEATSERAAWFMGNVQVSRGGPSVSMVMKTLGDAETGAVRHPT
QNLPLSPQGTVRVAVEFQVTSETQALNRLLGSPVALHCSFSMAPGLDLIGVEWRLQHKGS
GRLVYSWKAGQVQATHKGATLEPEQLHAAGDASLTLANLTLKDEGTYICQITTSLYQAQQ
IIPLDILAPPKVQLNLANKDLLPSLTCSAAGYYPLDVVVTWIREELGGIPAQVTGASFSS
IRQSMMGTYSISSTVTAEPGLAGATYICQVTHVSLEEPLRVSMRVLPDTEQRTAFGVFFA
SGLFLLALFFLILQRQQVSVSRPAMPMRHSG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaggccaggcgacaaagtcagtcgaagtgaaagcgaaagagaagccgactgag
atacagcagcggaagagagctcaagcggctagccaagcgaggggcgctctaaagaatcct
ctcttcagccggggatctgtaccagaggaaccgtggagaaggcagccagcgaggaggagc
ctgagagcagcctccatgggctcggagcccagctggtgtctgctgctctgtctggctctc
tctggggcagcagggactgagccccccacagcagagagaccgtggcagcccaccgacata
gtcttggactgcttcttggtgacagaagacaggcatcgaggggcttttgccagcaagggg
gacagggagagggccctgcttgtgctgaagcaggtgccagtgccggatgacggctcccta
gacgatatcactgatttccaagcgagcacagtggccaaagacgacccgcctgttatcttc
gaggcctcggtggacttggtacagatccctcaggcagaggccttgctccatgcggactgc
aacgggaaggtggtgacctgtgagatctcccagtacttcctccagactggaccagaggcc
acttcagagagagcagcttggttcatgggcaatgtgcaggtatctagagggggacccagt
gtctccatggtgatgaagactctaggagatgctgagaccggagctgtccggcaccctacg
cagaacctacccctgagtccccagggtacggtcagggttgcagtggagttccaggtgaca
tcagagacccaagccctgaatcgcctgctggggtcccctgtggccctgcactgcagtttc
tccatggcacccggcctggacctcattggggtggagtggcggctgcagcacaaaggcagc
ggtcggctggtgtacagctggaaggcagggcaggtacaggctacgcacaagggcgccacg
ctggagcctgagcagctgcatgcggctggggatgcctcgctcaccttagccaacctcact
ctgaaggatgaggggacctacatctgccagatcactacctctctgtaccaagctcaacaa
atcatcccccttgacatcctagctccccccaaagtacaactgaacttggcaaacaaggat
ctgctgccctccctgacctgcagtgccgctggctattaccctctggatgtggtggtgaca
tggattcgggaggagctgggtggaattccagcccaagtcactggggcctccttctccagc
atcaggcaaagcatgatggggacctacagcatctcttccaccgtgacagctgagcccggc
ctggcaggcgccacttacatctgccaagttacccacgtctccctggaggagccgctgaga
gtcagcatgagggttttacccgacacagagcagagaacagcctttggagtcttctttgcc
agtggtctcttccttcttgcactgttttttctgatactccagagacagcaagtttctgtg
tcaaggcctgccatgcctatgaggcactccgggtag
DBGET
integrated database retrieval system
