Arvicola amphibius (Eurasian water vole): 119808053
Help
Entry
119808053 CDS
T08327
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119808053 (Vps50)
Membrane trafficking [BR:
aamp04131
]
Protein recycling
Others
EARP complex
119808053 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
119808053
NCBI-ProteinID:
XP_038176299
LinkDB
All DBs
Position
2:151928513..152061191
Genome browser
AA seq
963 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGVFESLRVPGKEEFRELREQPSDPQVEQELINSIEQV
YFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRQLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQQAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYHRTMEWHGKHDSEETATASEG
SNVMSTEEASFDRSYVRQKLEHGLTRIWQDVQLKVKIYLLGTDLSIFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSINYFKNHHRIRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQPLVTTSKPMTLFEQYCSAGNPFEIQANHKDEETEDVLA
SNGYESDEQERAYQESDSDSDVPEELKQDYVDEQTGDVPVKSVSRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDLEVSTDPSATLTAAEERKEKVPSPHLNQLVILTSGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEQFNKQLSEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDR
PKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctaatgacccggcagggtctgaaaagccctccagagagcctc
agtgatctcggtgtctttgagagtcttcgggtccctggaaaggaggaattcagggagctt
cgagaacagccgagcgaccctcaagttgaacaagagctaattaatagtatcgagcaagtc
tatttttctgcggacccatttgatattgttaaatatgagctggagaagcttcctcctgtt
ctcaatctgcaagaattggaggaatacagagataaattaaagcaacaacaagctgcagtt
tctaaaaaagtagcagatttgattcttgaaaaacagcctgcttatgtaaaggagcttgaa
agagttacatcattgcagacaggtcttcagctggctgctgttatctgcacaaatgggagg
agacaattgaatattgcaaaggaaggttttactcaggccagcttaggccttcttgcaaat
caaaggaagcgtcagttgttgattggacttctgaagtcgttgagaactataaaaacattg
caaaggaccgatgtacgtttaagtgaaatgctagaggaggaggactatcctggagccatt
cagctgtgtctggagtgtcagcaggcggccagcacttttaaacactacagctgtataagt
gagctgaattcaaagctgcaggatactttggaacaaatcgaggaacagctggatgtagct
ctttccaaaatctgcaagaattttgatattaatcattataccaaagttcagcaagcttat
cgacttcttggaaaaacacagactgcaatggaccaacttcatatgcacttcactcaagcc
attcacaacaccgtgtttcaggttgtgctcggctatgtggagctgtgtgcgggaaacaca
gacaccaaattccagaagctgcagtataaagatctctgtacgcatgtaacaccagacagc
tatattccgtgcctggcggacctgtgcaaagcactgtgggaagtcatgctcagctaccac
aggaccatggagtggcacgggaagcacgacagtgaggagacagcgacagcgtctgaagga
agtaacgtgatgagtactgaagaagccagttttgatcgtagctatgtgagacagaaactg
gagcacggccttacgcggatatggcaggatgtccaactaaaagtaaaaatctacttactt
ggaactgatttatctatattcaaatacgatgattttatctttgttttggatatagtcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaggaatct
attagaaaacaaagtatcaattatttcaagaaccaccacagaatacgacttgatgaactg
agaatgttcttagagaatgagacatgggagctttgccctgttaaatcaaatttcagcatc
ttgcagcttcatgaatttaaatttctggaacagtctcgctccccatcagtttcacctagt
aagcagccattggtgactacttcaaaacccatgactttgtttgaacagtactgtagtgct
gggaatccatttgaaattcaagctaaccataaagatgaagaaacagaagatgtattggct
tctaatgggtatgaatctgatgagcaggagagagcctatcaggagtctgacagtgacagt
gacgtccccgaggagctgaagcaggattacgtggatgagcagacgggcgacgtgcccgtg
aagagtgtttcacgagagacccttaagagcaggaagaaatcagattacagtctaaataaa
gtgaacgcaccaatcttaacaaatacaacgttgaatgtaataagacttgttgggaagtac
atgcagatgatgaacattcttaagccaatcgcctttgatgttatccattttatgtcccag
ctatttgattattacttgtatgcaatatataccttttttggtcggaatgattcactggag
tccacaggacttggcctcagtagtagccgactaagaacaacgctaaacagaatacaagaa
agccttattgacctggaggtttcaactgatcctagtgccacgctcacagcagcagaagaa
agaaaggagaaggtacccagcccacacctcaatcaactagtgattttgacatctggggat
acattatatgggttggcagagagagtggtagccacagaatccttggtgttcctggctgaa
cagtttgagttccttcagccacacttggatgctgtgatgcctgcagccaaaaagcccttt
cttcagcagttttattctcagactgtctcaactgccagtgaactacgcaaacccatttac
tggattgtggctggtaaagctattgattatgaacagatgcttctcctcatgactaatgtg
aagtgggatgtcaaagagattatgtcacaacacaacatatatgtagacgcattgctgaag
gaatttgagcaatttaacaagcagttaagtgaagtttctaagagagttcggatacccttg
cctgtctcaaatatactttgggaacattgtatccggctagctaacaggactattgtcgaa
ggatacgccaatgtcaagaagtgcagtaatgagggtcgtgccttgatgcagttggatttt
caacaatttttaatgaaacttgagaaactaactgatattagacccattcctgataaagag
tttgtggaaacatatatcaaagcatactacctaactgagaatgacatggagcgatggatc
aaagagcatagggaatattcaacgaagcagctgaccaacctggtgaatgtttgcctggga
tctcatatcaataaaaaagcaagacaaaagctcctagcagctatagatgatatagacagg
cctaaaagataa
DBGET
integrated database retrieval system
