KEGG   Arvicola amphibius (Eurasian water vole): 119808078
Entry
119808078         CDS       T08327                                 
Symbol
Ybx3
Name
(RefSeq) LOW QUALITY PROTEIN: Y-box-binding protein 3
  KO
K06099  cold shock domain protein A
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04530  Tight junction
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    119808078 (Ybx3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aamp03000]
    119808078 (Ybx3)
   03041 Spliceosome [BR:aamp03041]
    119808078 (Ybx3)
Transcription factors [BR:aamp03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Cold-shock domain factors, DbpA-like
    119808078 (Ybx3)
Spliceosome [BR:aamp03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    119808078 (Ybx3)
SSDB
Motif
Pfam: CSD OB_RNB S1CSD-TOTE-2
Other DBs
NCBI-GeneID: 119808078
NCBI-ProteinID: XP_038176342
LinkDB
Position
2:18593263..18617370
AA seq 361 aa
MSEAGEATTGGTTLPQAAADAPAAAPPDPAPKSPAAXGAPQAPAPAALLAGSPGGDAAPG
PAPASSAPAGSEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNP
RKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGP
PRNYAGEEEEEGSGSSEGFEPPATDGQFSGARNQLRRPQYRPPYRQRRFPPYHVGQTFDR
RSRVFPHPNRMQAGEIGEMKDGVPEGAQLQVHRNPTYRPRFRRGPARPRPAPAIGEAEDK
ENQQAANGPNQPSARRGFRRPYNYRRRPRPLNTVSQDGKETKAGEAPTENPAPATEQSSA
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagcgaggcgggcgaggccaccaccggcggcaccacgctcccgcaggccgcggccgac
gcgcccgccgcggcgcccccggaccccgcgcccaagagcccggcggccngcggcgcgccc
caggccccggcgcccgccgcgctgctcgcggggagccccggcggagacgcagcccccggg
cccgccccggcctcgtcagcccccgcgggcagcgaggacgcggagaagaaagttctcgcc
accaaagtccttggcactgtcaaatggttcaacgtcagaaatggatatggatttataaat
cgaaatgacaccaaagaagatgtgtttgtacaccagaccgccatcaagaagaataatcca
cgcaaatatctgcgcagtgtgggagatggagaaactgtagagtttgatgtggttgaagga
gaaaagggtgctgaagcagcaaatgtgactggtccagatggagttcctgtagaagggagt
cgttatgctgctgatcggcgccgctacagacgcggctactatggcagacgccgtggacct
ccccgtaattacgctggggaggaggaggaggaagggagcggcagcagtgaaggatttgaa
ccccctgccactgatgggcagttctctggggccaggaatcagctgcgccgtccccagtat
cgccctccataccggcagcggcgttttccgccttaccacgtgggacagacctttgaccgt
cgctcacgggtctttccccatcccaacagaatgcaggctggtgagattggtgagatgaag
gacggagtccctgagggagcacagctccaggttcatcggaatccaacttaccgcccaagg
ttccgcaggggacctgctcgcccacgacctgcccctgctattggagaggctgaagataaa
gagaatcagcaagctgccaatggcccgaaccagccttctgcccgccgtggattccgacgc
ccctacaactatcggcgccgcccccgtcccctgaacactgtttcacaagatggcaaagag
accaaggctggtgaagcaccaactgagaacccagctccagccaccgagcagagcagtgcc
gagtga

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