Arvicola amphibius (Eurasian water vole): 119808102
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Entry
119808102 CDS
T08327
Symbol
Sema4f
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-4F
KO
K06521
semaphorin 4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119808102 (Sema4f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
aamp04090
]
119808102 (Sema4f)
CD molecules [BR:
aamp04090
]
Proteins
119808102 (Sema4f)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema4F_C
Sema
PSI
LapA_dom
Motif
Other DBs
NCBI-GeneID:
119808102
NCBI-ProteinID:
XP_038176369
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Position
2:64967807..64994949
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AA seq
773 aa
AA seq
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MLAGAERPHPGPRPPPISPPPSLLLLLLAMLSAPVWGRVPRSVPRTSLPISEADSYLTRF
AAPRTYNYSALLVDPASHTLYVGARDSVFALTLPFSGERPRRIDWMVPEAHRQNCRKKGK
KEDECHNFIQILAIANASHLLTCGTFAFDPKCGVIVIFQQVEDFESGRGKCPFEPAQRSS
AVMAGGVLYTATVKNFLGTEPIISRAVGRAEDWIRTETLSSWLNAPAFVAAMVLSPAEWG
DEDGDDEIXFFFTETSRVLNSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLKADLLCPG
PEHGQASGVLQDMTELRPQPGAGTPVFYGIFSSQWEGAAISAVCAFRPQDIRAVLNGPFR
ELKHDCNRGLPVMDNEVPQPRPGECITNNMKLQQFGSSLSLPDRVLTFIRDHPLMDRPVF
PADGRPLLVTTDTAYLRVVAHRVTSLSGKEYDVLYLGTEDGHIHRAVRIGAQLSVLEDLA
LFPEPQPVESMKLYHGWLLVGSPTEVTQVNTSNCGRLQSCSECILAQDPVCAWSFRLDAC
VAHAGEHRGMVQDIESADVSSLCPKEPGEHPVVFEVPVATKGHVVLPCSPSSAWASCVWH
QPSGVTALTPRRDGLEVVVTPGAMVGAYACECQEGGAARVVAAYSLVWGSQQGPSNRAHT
VVGAGLVGFLLGVLVASLTLLLIGRRQQRRRQRELLARDKVGLDLGAPASGTTSYSQDPP
SPSPEDERLPLALAKRGSGFGGFPPPFLLDSCSSPAHIRLTGAPLATCDETSI
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgctggccggagccgagcggccccacccgggcccccggccgcctccgatctcgccgccg
ccgtcgctactgctgctgctgctggcgatgctgagcgccccggtgtggggccgcgtcccc
cggtcggtacccagaacctcgctgcccatctctgaggctgactcctatctcacgcggttt
gccgcccctcgcacatacaattactctgctctcctcgtggaccctgcatctcacacactt
tacgtcggagctcgggacagcgtcttcgctttaaccctgcccttctcgggggaacgaccc
cgcaggattgactggatggtgcctgaggcgcacagacagaactgtaggaagaaaggcaag
aaagaggacgaatgtcacaattttatccagattctcgccattgccaatgcctctcacctc
ctcacttgtggcaccttcgcctttgatccgaagtgcggggttattgtgattttccagcag
gttgaagactttgagagtggccgggggaaatgtccttttgagccagctcaacggtcatca
gctgtaatggctgggggcgtcctctacactgccactgtgaaaaacttcctgggcacagag
ccaataatctcccgagccgtgggtcgtgctgaggattggattcgaacagagaccttatca
tcctggcttaatgccccagcctttgtcgctgctatggtcctgagcccggctgagtggggg
gatgaagatggagatgatgaaatcnttttcttcttcacggagacctcccgagtgctgaac
tcatatgagcgcatcaaggtcccgcgggtggcccgagtgtgtgcgggggacctagggggc
cggaagacccttcaacagagatggacaacatttctaaaggccgacctgctgtgtccaggg
cctgagcatggccaggcctccggggtcctgcaggatatgacagagctccgacctcagcct
ggagcggggactcccgtcttctatggcatcttttcctctcagtgggaaggagctgccatc
tctgctgtgtgtgccttccgaccccaggatattcgggcagtgttgaacggtccctttaga
gagctaaaacatgactgcaacaggggactgcctgtcatggacaacgaggtgccccagccc
agacctggagagtgtatcaccaacaacatgaaactccagcagtttgggtcctcactctcc
ctgcctgaccgagtgctcaccttcatcagagaccacccgctcatggacaggcctgtgttc
ccagctgatggccgccccctgctggtcactacagatacagcctatctcagagttgtggcc
cacagggtgaccagcctctcagggaaagaatatgatgtgctctacctggggacagaggac
ggacacatccaccgggctgtgcgcatcggagctcagctcagtgtcctggaagatctggcc
ttgttcccggagccacagccggttgagagcatgaaactgtaccatggttggctcctggtg
ggctcccctaccgaggtaacacaagtgaacaccagcaactgcggccgtctccagagctgc
tccgagtgtatcctggcccaggaccctgtgtgtgcctggagcttccggcttgatgcttgt
gtggcccatgcaggggagcaccgtgggatggtccaagacatagagtcagcggatgtctcg
tctttgtgtccaaaagagcctggagaacacccggtagtgtttgaagttccagtggctacc
aagggacatgtggtcctgccatgttcccccagctctgcctgggcatcatgtgtctggcac
cagcccagtggagtaactgcactcaccccgcgaagggatgggctagaggtggtggtgacc
ccaggggccatggtgggtgcttatgcctgtgagtgtcaggagggtggagcggcccgtgtg
gtggctgcttacagcttggtgtggggcagccagcaggggccctcaaaccgggcccacact
gtggtaggggctggactggttggctttctcctgggggttcttgtggcgtccctcactctc
cttctgattggtcgccgtcaacagcgtcggcgtcagagggaacttctggctagagacaaa
gtgggcttagacctgggggccccagcttccggaaccacaagctacagccaagaccctccc
tccccttctcctgaagatgagcggctgcccctggccctggccaagaggggcagtggtttt
ggtggcttccctccacccttcctgcttgattcttgctcgagccctgcccacatccggctc
accggggctcctctagccacgtgtgatgagacatccatctag
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