Arvicola amphibius (Eurasian water vole): 119808172
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Entry
119808172 CDS
T08327
Symbol
Bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
119808172 (Bhlhe40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119808172 (Bhlhe40)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
119808172 (Bhlhe40)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Oscp1
Motif
Other DBs
NCBI-GeneID:
119808172
NCBI-ProteinID:
XP_038176493
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Position
2:complement(39457844..39463944)
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AA seq
411 aa
AA seq
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MERIPSAQPPPTCLPKAPGLEHGDLSGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGELSGRNIEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVA
ELLQGGTSRKPSDSAPKAMDFKEKPSFLAKGSEGPGKNCVPVIQRTFAPSGGEQSGSDTD
TDSGYGGELEKGDVRSDQSYFKSHHSRRLTMGDRVSTIKQESEEPPTKKSRMQLSDEEGH
FAGSDLMGSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLDKCWYPTSVPVLYPGLNTSAA
ALSSFMNPDKIPTPLLLPQRLPSPLAHSSLDSSALLQALKQIPPLNLETKD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagcgcgcaaccacctcctacctgcctgcccaaagcgccgggactg
gagcatggagacctgtcagggatggattttgcccacatgtaccaagtgtacaagtccagg
cgggggataaaacggagcgaggacagcaaggaaacttacaaattgccgcatcggctgatt
gagaaaaagagacgtgaccggattaacgagtgcattgcccagctgaaggatctcctaccc
gaacacctcaaacttacaactttgggtcacttggagaaagcggtggttctggagcttacg
ctgaagcatgtgaaagcactgacaaatctaattgatcagcagcaacaaaaaatcattgcc
cttcagagcggattgcaagctggtgagctgtcgggaagaaatatcgaagcaggacaagaa
atgttctgctcaggtttccagacatgtgcccgggaggtgcttcagtacctggccaagcat
gagaacactcgggacctgaagtcttcgcagcttgtcactcatctccaccgcgtggttgct
gagctgctgcagggtggtacttccaggaagccatcggactcggctcccaaagccatggac
ttcaaagagaaacccagtttcctggccaagggatcggaagggcctgggaaaaactgtgtg
ccagtcatccagcggactttcgccccctccggtggggagcagagcgggagcgacactgac
acagacagtggctatggaggggagctggagaagggtgacgtgcgcagtgaccagtcgtac
ttcaaaagccatcacagtcgcaggctcaccatgggagatcgcgtcagcacaattaaacaa
gaatctgaagagccccccaccaaaaagagccggatgcagctctcggatgaggaaggccac
ttcgctggcagtgacctgatgggttccccatttctgggcccgcacccacatcagcctccc
ttttgcctgcccttctatctcatcccaccgtcggcaactgcctacctgcctatgctggat
aaatgctggtaccccacctctgtgccggtcttatacccaggcctcaacacctctgcagca
gccctctccagcttcatgaacccagacaagatcccgactcccttgctcctgccccagaga
ctcccttctcccttggcacattcgtccctcgactcttcagccttgctccaggctctgaag
cagatcccccctttaaacttagaaaccaaagactga
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