Arvicola amphibius (Eurasian water vole): 119808182
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Entry
119808182 CDS
T08327
Symbol
Shh
Name
(RefSeq) LOW QUALITY PROTEIN: sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04340
Hedgehog signaling pathway
aamp04360
Axon guidance
aamp05200
Pathways in cancer
aamp05205
Proteoglycans in cancer
aamp05217
Basal cell carcinoma
aamp05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119808182 (Shh)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119808182 (Shh)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119808182 (Shh)
05205 Proteoglycans in cancer
119808182 (Shh)
09162 Cancer: specific types
05226 Gastric cancer
119808182 (Shh)
05217 Basal cell carcinoma
119808182 (Shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aamp01002
]
119808182 (Shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aamp00536
]
119808182 (Shh)
Peptidases and inhibitors [BR:
aamp01002
]
Cysteine peptidases
Family C46: hedgehog family
119808182 (Shh)
Glycosaminoglycan binding proteins [BR:
aamp00536
]
Heparan sulfate / Heparin
Morphogens
119808182 (Shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Motif
Other DBs
NCBI-GeneID:
119808182
NCBI-ProteinID:
XP_038176506
LinkDB
All DBs
Position
2:145641975..145650830
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AA seq
441 aa
AA seq
DB search
MLLLARCLLVVLASSLLVCPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNAWPSLXXPQWPGV
EAAWTDGWNEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSDFLT
FLDRDEGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSGAAGPAPGSGPSALFASRVR
PGQRVYVVAERNGDRRLLPAAVHSVTLREEAAGAYAPLTAHGTILINRVLASCYAVIEEH
SWAHRAFAPFRLAHALLTALAPARTDAGGGGSVPAPQPAAETRGSGPASGIHWYSQLLYQ
IGTWLLDSETLHPLGMAVKSS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctagcgagatgtcttctggtggtcctcgcttcctcgctgctggtgtgcccc
gggctggcgtgcgggcccggtagggggtttggaaagaggcggcaccccaaaaagctgacc
cctttagcctacaagcagtttatccccaacgtagccgagaagaccctaggggccagcggc
agatacgaagggaagatcacaagaaactccgagcgatttaaggaactcacccccaattac
aaccccgacatcatatttaaggatgaggaaaacacgggagcagaccggctgatgactcag
aggtgcaaagacaagctgaatgcctggccatctctgtgatgaccccagtggccgggagtt
gaagctgcgtggactgatggctggaatgaggatggccatcattccgaagagtctttgcac
tatgagggccgagcagtggacatcaccacatcggaccgggaccgaagcaagtatggcatg
ctggcgcgcctggctgtggaagctggcttcgactgggtctactatgaatccaaagcacac
atccactgctctgtgaaagcggagaactccgtggcggccaaatccgggggctgcttcccg
ggatccgccacagtgcacctggaacagggtggcaccaagctggtgaaggacctgcgtcca
ggagaccgcgtgttggcggcggacgaccagggccggctgctgtacagcgacttcctcacc
ttcctggaccgcgacgaaggcgccaagaaggtcttctacgtgatcgagacgcgggagccg
cgcgaacgcctgctgctcaccgccgcgcacctgctcttcgtggcaccacacaacgactcg
ggagccgcggggcccgcgccgggatcgggaccgagcgcgctcttcgccagccgcgtgcgc
cccggccagcgtgtgtacgtggtggcggaacgcaacggggaccgccggctgctgccagcc
gcggtgcacagcgtgacgctgcgtgaggaggccgcgggcgcgtacgcaccgctcacggcg
cacggcaccatcctcatcaaccgggtgctggcctcgtgctacgccgtcattgaggagcac
agctgggcacaccgggccttcgcgcccttccgcttggcacacgcgctcctgaccgcgttg
gcgcccgcccgcacggacgccgggggtggaggcagcgtccccgcaccccaacccgcagcg
gagacgaggggctcagggccggcctcgggcatccactggtactcgcagctgctctaccaa
attggcacctggctgttggacagcgagaccttgcatcccttgggaatggcggtcaaatcc
agctga
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