Arvicola amphibius (Eurasian water vole): 119808331
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Entry
119808331 CDS
T08327
Symbol
Mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119808331 (Mms19)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119808331 (Mms19)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119808331 (Mms19)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
119808331 (Mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_2
TOR1L1_N
HEAT
DUF4704
HEAT_ECM29
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
119808331
NCBI-ProteinID:
XP_038176717
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All DBs
Position
1:complement(181636236..181672296)
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AA seq
1031 aa
AA seq
DB search
MAAATALEEAAAPVGALCGLVQDFVMGQQEGPADQVAADVKSGGYTVLQVVEALGSSLEN
PEPRTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSMS
MALPPGLAVSVLKAIFQEIHVQSLLQVDRHTVFSIITNFMRSREEELKGLGADFTFGFIQ
VMDGEKDPRNLLVAFRIVHDLISKDYSLGPFVEELFEVTSCYFPIDFTPPPNDPYGIQRE
DLILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLP
SLWASIRREVFQTASERVEAEGLAALHSLTACLSCSVLRADAEDLLDSFLSTILQDCRHH
LCEPDMKLVWPSAKLLQAAAGASARACEHITRNVLPLLLEQFHKHSQSNQRRTILEMLLG
FLKLQQKWNYEEKDERPLTSFKDQLCSLVFMALTDPSTQLQLVGIRTLTVLGSQPDLLSS
GDLELAIGHLYRLSFLEEDFQSCRVAALEASGTLTTLYPGAFSSHLLPKLAKELHKGESD
VAREDGLMKSSRHFYCLQALSAISTHPSIVRETLPLLLQHLCQANKGNMNTEPSEITAIC
QSLQQVAEKCQQDPESYWYFHETAVPYLFGLAVQASMPEKESSVLRRVLLEDEVLAALAS
VIVTATTHLSPELAAQSVMCIVPLFLDGNTSFLPENSFPSRFQPFQSGSSAQRRLVALLT
AFVCSLPRNVEIPQLNRLMRELLEQSCCHSCSFSSTAAAKCFAGLLNKHPPGQQLDEFLQ
LAMDTVETGLVSGSSRNQAFALLLWVTKALVLRYHPLSTCLTTRLMGLLSDPELGPAAAD
GFSLLMSDCTDVLTRAGHADVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVL
NRLPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLVEAPQIMSLHVDTLVTKF
LTLISSPSMAVRIAALQCMHALTRLPTPVLLPYKSQVIRALAKPLDDKKRLVRKEAVSAR
GEWFLLGSPGS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccaccgcgctggaggaggcggcggcgcccgtgggcgctctgtgtggcctc
gtgcaagacttcgtcatgggccagcaggaggggcccgctgaccaggtggctgcagatgtg
aaatccggtggctatacagtgttacaagtggtagaagcccttgggtcatctctggagaat
ccagaaccccgaactcgggcacgaggaatccagcttttgtcacaggtgctgctccagtgt
cactccttgctcctggagaaggaagtggtacatctgatcctgttctatgagaaccggctg
aaggaccatcatcttgtgatcccatctgtcctccagggcctgagggcactgagcatgtct
atggccctgcctcctgggctggctgtctctgtacttaaagccatcttccaggagatacat
gtacagtccctgctacaagtggatcgccatacagtattcagtatcatcactaacttcatg
cgatcacgggaagaagagctgaagggcctaggagctgacttcacatttggcttcatccag
gtgatggatggagaaaaggatcctcgtaatcttttggtggctttccgcattgtccatgac
ctcatctccaaggactacagtctgggaccttttgtggaagagttatttgaagtgacatct
tgttatttccctattgattttacccctccacctaatgatccctatggcatccagagagaa
gatctcatcctgagtctccgtgctgtgctggcttctacaccacgttttgctgagttcttg
ctgcctctgctgattgagaaagtagattctgagattttaagtgccaagctagattctctg
caaactctgaatgcttgctgtgctgtatatggacaaaaggaactaaaggacttcctcccg
agcctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgcgtagaagca
gagggcctggcagccctccactccctgactgcgtgtttgtcttgctctgtgctgagggct
gatgctgaggaccttcttgactccttcctcagcaccattctacaggactgcaggcatcat
ctatgtgaaccagatatgaaactggtgtggcctagtgccaagctgttgcaggctgctgca
ggtgcgtctgcccgggcctgtgagcacatcacccgcaacgtgcttcccttgctcctggaa
cagttccacaagcacagtcagagcaaccagcgacggacaatccttgaaatgctcctgggt
ttcttaaagctacagcagaaatggaactatgaagagaaagatgaaaggcctctgactagc
ttcaaggaccagctgtgctcattggtattcatggctctaacagaccccagcacccagctt
cagcttgttggcatccggacactcacagttttaggttctcagccagatcttctatcttct
ggggacttggagctggcaataggtcacctgtaccgactgagcttcctggaggaagatttc
cagagttgtcgggtggcagcactggaggcatctggaacccttaccacactctatcctgga
gccttcagcagccacctgctacccaagcttgctaaggagctacataaaggtgagtcagat
gtggctagagaagatggtctcatgaaaagttcccggcatttctactgtctgcaagctttg
tcagccatttcaacacatcccagcattgtcagggagacactacctctgctgctgcagcat
ctctgtcaagcaaacaaagggaatatgaatacagaacccagtgaaattactgctatctgt
caaagtctccagcaagtggcagaaaaatgccagcaggaccctgagagctactggtatttc
cacgagacagctgtaccctacctgtttggtttggctgtccaggcttccatgccagagaag
gaatcctcagttctgagaagagtactgttggaggatgaggtcttggctgccttggcatct
gtcattgtaactgctactacccacctgagccctgaactagctgcccagagtgtcatgtgc
atcgtgcccctcttcttagatggcaacacctcctttctacctgagaatagcttcccaagc
cgattccagccattccagagtggctcctctgcacagaggcgactggttgcactgcttaca
gcttttgtctgctccctgccacgaaatgtggaaatccctcagctgaaccgacttatgcgg
gagcttctggaacagagctgctgccacagctgctccttttcttccactgccgccgccaag
tgcttcgcaggactcctcaacaagcaccctccagggcagcaattggatgaattcctccag
cttgctatggacacagtggagactggcctggtctctggatcttctcgtaatcaggctttt
gctctcctgctctgggtaaccaaggctttagtcctcagataccatcctctcagcacctgc
cttaccacccgactcatgggcctcctcagtgatccagaactaggccctgcagcagccgat
ggcttctctctactcatgtctgactgcactgatgtgttgactcgtgccggccatgctgat
gttcggattatgttccgccagcggttcttcacagacaatgtgcctgctttggtccaaggc
ttccatgctgctccccaagatgtgaagccaaactatctaaagggtctgtctcatgtactc
aacaggctgcccaagcctgtgcttttaccagagctgcccacactcctttccttgctgctg
gaggcactgtcctgccctgattccgtggtccagctttctactctcagctgtctacagccc
cttctagtggaagcaccccagatcatgagtcttcatgttgataccctggtcaccaaattc
ctgaccctcatctccagtccttcaatggctgtccggattgctgctctgcagtgtatgcat
gccctcactcgcctgcccactcctgtgctactgccatacaaatcccaggtgatccgggcc
ttagccaagcctttggatgacaagaagagacttgtgcgcaaggaagcagtgtctgcgagg
ggagaatggtttctgctggggagcccaggtagctga
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