KEGG   Arvicola amphibius (Eurasian water vole): 119808696
Entry
119808696         CDS       T08327                                 
Symbol
Trim42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aamp01009]
    119808696 (Trim42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aamp04121]
    119808696 (Trim42)
Protein phosphatases and associated proteins [BR:aamp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119808696 (Trim42)
Ubiquitin system [BR:aamp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    119808696 (Trim42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N TRIM_CC CHDCT2 FN3_DSCAM-DSCAML_C Fn3_VIN3
Other DBs
NCBI-GeneID: 119808696
NCBI-ProteinID: XP_038177009
LinkDB
Position
3:complement(163704475..163724838)
AA seq 723 aa
METAMCVCSPCCTWQRCCPRLFSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCAEN
PNCHWCCCSWANDPNCKYCCTTSTNMKCYYYESRCCRNATITFRRGLLRSIRISSKTALH
IGSSDTQLEEPKSMPASSHLVSHLTCPMCNRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPMCNRSHCMPYSHQMHLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPILCQV
CRSRRIAYKRCVTCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEDQDEKICIHHPSSRITE
YCRSDNQLLCTFCKIAFHNGHDTVSLIDACSERSAALFSAIAKFKAVRYEIDNDLMEFNI
LKSSFKADKEAKRKEIRNGFLKLRAILQEKEKVIMEQIENLEVSRQKEIEKYVYITTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEEGIQNTFRPDPQLRLHSLHCIPLDFA
ELSSAIHELFPTGPKKTCSSGDSLPSQYPIHSEMMITRKVTFSTHSFGNQQIYQRSSSLM
SFTAANDKAKMGIEAFGRAQSAAPAKPTDGLYTYWSATGETQPPQNSNSFHNWYSFNDAS
VKPPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELVTTPPNNVRTELCGQIRDIM
QQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQSALQ
KRF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggagacggccatgtgcgtgtgttctccgtgctgcacctggcagaggtgctgtcctcgg
ctcttctcctgtctgtgctgcaagttcatcttcacctcagagcggaactgcacctgcttc
ccctgcccctacaaggatgagcggaactgccagttctgccactgcacctgcgccgagaac
cccaattgccactggtgctgctgctcctgggccaacgaccccaactgcaagtactgctgc
acgaccagcaccaacatgaaatgctactactacgagagccgctgctgccggaatgccacc
atcaccttcagaagggggctcctgcggagcatccggatctcctccaagaccgccctccac
atagggagcagcgacacccagctggaggagccgaagtccatgcccgccagcagccacttg
gtgagccatctcacctgccccatgtgcaaccggctgcgcctgcactccttcatgctgccg
tgcaaccacagcctgtgcgagaagtgcctgcggcagctgcaaaagcatgccgaggtcacg
gagaacttcttcatcctcatctgccccatgtgcaaccgctcgcactgcatgccctacagc
caccagatgcaccttccagaaaactatctgcgcgggcgcctcaccaaacgctacatgcag
cagcatggctacctcaagtggcgcttcgaccgatcctcggggcccatcctctgccaggtg
tgccgcagccgtcgcattgcctacaagcgctgtgtcacctgccgcctcaacctgtgcaac
gactgcctcaaggccttccactcggacgtggcgatgcaggaccacgtcttcgtggacacc
agcgccgaggaccaggatgagaagatttgcatccatcacccatcgagccgcatcaccgag
tactgccgcagcgacaaccagctgctctgtaccttctgcaagatcgctttccacaatggc
catgacacggtcagcctcatagatgcctgctccgagaggtctgcagccctcttcagtgcc
attgccaagttcaaagcagtccgatatgaaattgataacgacctgatggaattcaacatt
ttaaagagcagctttaaagccgacaaggaggcgaagcggaaggagatcagaaacgggttc
ctgaaactgcgagccatccttcaagagaaagagaaggtcatcatggagcagatagagaac
ctggaggtgtccaggcagaaggagatcgagaagtacgtgtacatcaccaccatgaaggtg
aacgagatggacggcctgatcgcctactccaaggaagcactgaaggaaacgggacaggtg
gcctttctgcagtcagctaagatcctagtggaccagatcgaggagggcatccagaacacc
ttcaggccggaccctcagctgcggctgcactccctacactgcatccccttggattttgct
gaactctccagtgccatccacgagctctttcccacgggacctaagaagacttgctcctcg
ggggactctctcccttcccagtatcctatccactcagaaatgatgatcaccaggaaggtc
acattcagcacccacagctttggcaaccagcagatataccagcgaagctcctccttgatg
tccttcactgccgctaacgacaaggccaagatgggaatagaggcctttgggagggctcag
tctgctgcgcctgccaaaccaactgacggcctctatacctactggagcgccacgggggag
acccagcccccacagaacagtaatagcttccacaactggtactcattcaatgacgcctct
gtgaagcccccgggcccaattgtcatctaccagactctggtgtatccaagagctgccaag
gtttactggacatgcccaacagaggacgtggattcctttgagatggaattctacgagctc
gttaccacccctcctaacaatgtccgaacagagctctgtggacaaatccgggacatcatg
cagcagaacctggagctgcacaacctcacccccaacacagagtatttgttcaaggttaga
gccatcaacgacaacggtcccgggcagtggagtgacatctgcaaggtggtaacaccagat
gggcgtgggaagaaccgagctaagtggggcctgctgaagaatatccagtctgccctgcag
aagcgcttctag

DBGET integrated database retrieval system