Arvicola amphibius (Eurasian water vole): 119808934
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Entry
119808934 CDS
T08327
Symbol
Ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119808934 (Ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119808934 (Ttc37)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119808934 (Ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_16
TPR_14
TPR_12
TPR_17
TPR_11
TPR_CcmH_CycH
ARM_TT21_C
ANAPC3
TPR_9
ARM_TT21_2nd
Sel1
Fis1_TPR_C
TPR_15
BTAD
ANAPC8
Sey1_3HB
TPR_30
TPR_20
Motif
Other DBs
NCBI-GeneID:
119808934
NCBI-ProteinID:
XP_038177423
LinkDB
All DBs
Position
3:complement(70381860..70487490)
Genome browser
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKATELEPEQLLAWQGLASLYEKCHHENAKGDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLHHQEKRYLEVARTWSKLIKTRQEDGADKQELYELWRKLTQLLAEEIEDQDNETQQ
MLWTAFENALDLADSIPSEEHRGLYQRFLQCLSKFPHETTRLKKACEGMINTYPTVQYPL
EVICLYLIESGSLTDEGQQYCCKLVEMNSKSGPGLIGLGVKALQDKKYEDAVSHLTEGLT
ESPLCIAGWYHLAEAQSKVHRPKEAILSCNQALKNIDNHGAAGGRRHQKNLCLLLKAEAL
LKLSEDESSEEAIRILDQVSDAANTPRLLVLQGQAHLNTGAVDKAAKIAEDLQASYPVLA
EVHALEGLIHFSKKDYLQAEACFQRALEKDSEVAEYHYQLGLTYWFMGEEARKDKSKALA
HFLKAARLDTYMGKVFCYLGHYYRLVAGDSSRARGCYRKAFELDGSDAESGAAAVDLSVE
LEDTETALAILTAVTQKASAGAAKWAWLRRGLYHLKAGQHSQAVADLQAALRADPKDSNC
WESLGEAYLSRGGYTTALKSFTRASELNPDSTYSVFKVAAIQQILGRYAEAIAQYQLIIE
KKEDYVPALKGLGECYLMMVKAALADFLDGKAVDYVEKALEYFTGALQHRADVSCLWKLA
GDACTSLHAVSPSKVRVPVLGVLLGQQGGREVLEKEGLLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGNSTDVLTELLEKSVHCLKKAVRLDSSNHLYWNALGVIACYRGI
GNYALAQHCFIKSVQAEQINAAAWTNLGVLYLATENIEQAHEAFKMAQSLDPSYLLCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYRYNILQMN
AVPAAQGVLCKYVERIQNYAPAFTMLGYLNEHLQLRREAAEAYQRAAALLDPTEDQHTYT
VTVRNWGRLLCSIGEYDRAVQAFESTPLEELEDIIGFALALFMKGRYKESSKAYERALTV
VKSEQDKTHVLTAMAITEYKQGQMDAAKSLLFKCSILKEPTIESLQALCALGLAMQDATL
SKAALNELLKHVRHKHDYHRCLLTAAVCALQGRSVAVQRQAAKAVHSNPADPALWSLLSR
VVAQYTQRNAKGGAVAGLVAHILDSNHGKKALLYTALNQLAMGSSSAEDGKNVALKTIQK
AAFLSPDDPAVWAGLMAACHADDKLALVSNTQPKRANLHLAQLSAVSIALKDKEILQNYN
QLLEKWCLSQAVTGLIDTGKISEAESLCTKNLKGNPDQPAVILLLRQVQCKSLLESQKPL
PDAVLEELQKTVMSNSTSVPAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQGSWSGKLS
SLLKLALLALDVCMANVSGDHWSSLLQEATSEALKVCFCPLAVFLQALLQFNRKMGARET
RRLLERVVYQPGYPNSIVSTARWYLLRHLYAKNDQELIDVLVKNAETHSDKRTLELNEKL
SSQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaaagaagtgaagactgccctgaagagtgcaagagacgcaatcagaaacaaa
gagtacaaagaagctttgaaacattgcaagacagtgctaaaacaagaaaaaaataactat
aatgcctgggtcttcattggtgttgctgcagctgaactagaacagcccgaccaggcccag
ggtgcctataaaaaggctactgaactagagccagagcagctgcttgcttggcaggggcta
gcaagtttgtatgagaagtgtcatcatgaaaatgctaagggtgatttacctggggtttac
caaaagctgttggatctctatgaaagtgttgacaagcagaagtggtgtgatgtctgtaag
aaactcgtggatctgcatcaccaggaaaagagatacctagaggtggctcggacttggagt
aaactgataaagacacggcaagaagacggagcagacaagcaagagctttatgagctgtgg
agaaaactgactcagttgctcgctgaggagatagaggatcaggataatgaaactcagcag
atgctgtggacggcatttgagaatgcactggacttagcggacagtattcccagtgaagag
caccgagggctctatcagcgtttccttcagtgcttatctaaattccctcatgagacaact
aggttgaagaaggcctgtgaaggaatgataaatacctatcctaccgtacaatatccacta
gaagtgatttgtttatacttgattgagtcagggagtctgacagatgagggacagcagtat
tgttgtaaactagtggaaatgaattcaaaaagtggtccaggcctcattggcttaggcgtt
aaagctttacaagacaagaagtatgaagatgctgttagtcacctaacggaaggcttgaca
gaaagccctctctgcatagctggctggtatcatctagcagaagcccaatccaaagtgcac
agacctaaggaagctattctgtcttgcaaccaagcgcttaagaacatagataatcacggt
gcagcaggtggccgtcgtcatcagaagaatctttgtcttcttctgaaagcagaggctttg
cttaaactctccgaagatgaatcttcagaggaagcaattcgcattcttgatcaggtttca
gatgcagctaataccccacgactgctggttcttcaaggccaggcccatctgaacacaggc
gctgtagacaaggctgcgaagattgcggaagaccttcaagcttcttaccctgtcctagcc
gaagtccatgcacttgagggcttgattcatttttctaagaaggactatctgcaagcagaa
gcatgtttccagagagcacttgagaaagactccgaagttgctgaatatcattatcagctt
gggttgacatattggttcatgggtgaagaagcaagaaaagataaatcaaaggctcttgcc
cattttctgaaagctgcaagactggacacatatatgggtaaagttttctgctatttaggt
cactattaccgccttgtcgctggagatagcagcagagctcgcggatgttacaggaaagcc
tttgaattagacggcagcgatgctgagtccggagcagcagccgttgacctaagtgtggaa
cttgaagacacggaaactgctttggctatcttaacagcagtaactcaaaaggcaagtgcc
ggagcagcgaagtgggcctggctgaggcgaggcctgtaccatctgaaagctggtcagcat
tctcaagccgtggccgatttacaggcggcactaagggcagacccaaaggacagcaattgt
tgggagtccttgggagaggcatacttgagcaggggaggctatacgacagccttgaagtct
ttcaccagagccagtgagctgaacccagactccacctacagtgtgtttaaagtggcagca
atacagcagatcctaggcaggtatgcagaggccatcgctcagtatcagctgatcattgaa
aagaaggaggattatgtgccagccttgaaaggtttgggtgagtgctatctgatgatggtg
aaagcagccttagcggattttctggatggaaaggctgtagactatgtggaaaaagcgctg
gaatattttactggggcactgcaacatcgagctgatgtgtcctgcctctggaagctcgct
ggggacgcctgcaccagcctgcatgctgtttcgccatctaaagtgcgcgttcctgtctta
ggggtcctccttggccagcagggaggaagagaagtactagagaaagaggggctcctgcat
cttggaggaaggtgttatggtcgagcattaaaattgatgtctacatctaatacatggtgt
gatcttggaattaattattaccgccaagcacagcatctagcagagacaggcaacagcacg
gatgttcttacagagctactggagaaatctgtgcattgtctgaaaaaggctgtgagactg
gacagtagtaatcacttatactggaacgctcttggagtaattgcgtgttaccgtggtatt
ggaaattatgcccttgctcagcactgttttatcaaatcagtacaggcagaacaaattaat
gctgctgcctggaccaacttaggcgtgctctaccttgcgactgaaaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccgtcttatttactgtgctggattgga
caagctcttattgcagagacagttggaagttatgacaccatggatctcttcagacacact
acagagctcagtatgcatactgaaggagccataggttatgcatattgggtttgtacaaca
ttacaagacaaaagcaacagagaaacagagctctacagatataacatcctccagatgaac
gctgtccctgcagcacagggtgttctgtgtaaatacgtggaaaggattcagaattacgca
ccagctttcacgatgttgggttacttaaatgaacatctgcagctgagaagagaagccgca
gaggcgtaccaaagggcagctgcgctgttagatcccacagaagaccaacacacttacact
gttacagtgagaaactggggcagattgctatgctccattggtgaatatgacagagctgtg
caagcctttgagtcgacgccccttgaggaactggaggacatcatagggtttgcattggcc
ttgtttatgaagggacggtataaggagagcagcaaagcctatgagagagccttgaccgtt
gtgaaatcagagcaagacaaaactcatgtcttgacagccatggcaataacagaatataag
caaggacaaatggatgcggccaagtcattgcttttcaaatgctctattttaaaggaacca
accatcgaaagcctgcaagccctgtgtgccctagggttggcaatgcaggatgctacactg
tcgaaagcagctcttaatgagttactgaagcacgtcagacacaagcacgattaccacagg
tgccttctcacggctgcagtttgtgcactgcagggccggagcgtggctgtgcaaagacag
gccgctaaggctgtccacagtaacccagctgacccggctctttggtctttgctgtctcga
gttgttgctcagtacactcaacggaatgcaaagggaggtgcggtagctggactcgtggct
catattctggattccaatcatggaaagaaggcgttattgtatactgcattaaaccagttg
gccatgggaagcagttcagcagaagatggaaaaaacgttgctctaaagaccattcagaag
gcagctttcctttctccagatgaccccgctgtctgggctggactgatggcagcctgccac
gctgatgacaaactggcattggtcagcaacactcagccaaagagggccaatttgcactta
gcacagctgtctgctgtttctatcgcacttaaggacaaagaaattttgcagaattacaac
cagttacttgaaaagtggtgtctctcccaagctgtcactggtctaattgacacaggaaaa
atatctgaagctgaatctctgtgcacaaagaatttaaaaggcaaccctgatcagccagct
gttatcttgctgttgagacaagtgcagtgtaaatcactcctggagtctcagaagcccctc
ccagatgctgtactagaagaactgcaaaaaacagtcatgtcgaactccacctctgttccg
gcctggcagtggctggcacaggtgtatcagtcccaaggaatgatgggtgctgcagagatg
tgctacagaaagagtctacaagtggcgtcccaacagggcagctggagtgggaagctctcg
agtctgttgaagctagcactgcttgcattggatgtgtgcatggctaatgtttctggtgat
cactggtcgtccttgcttcaagaagccacaagtgaggccctgaaagtttgcttctgtccg
ctggctgtcttcttgcaagctctgttacagttcaaccgtaagatgggagcaagagagacg
cggcgactcttggagagagtagtgtaccagcctggttatcccaactcaattgtatcaacg
gcacgttggtacctcttaagacacctctatgcgaaaaatgaccaggagctcattgatgtg
ttggtgaagaatgctgaaactcacagtgataaaagaacgctggaactgaacgagaagctg
tcatcacagtaa
DBGET
integrated database retrieval system
