Arvicola amphibius (Eurasian water vole): 119808988
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Entry
119808988 CDS
T08327
Symbol
Nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119808988 (Nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119808988 (Nipbl)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
119808988 (Nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
119808988
NCBI-ProteinID:
XP_038177527
LinkDB
All DBs
Position
3:25123990..25277482
Genome browser
AA seq
2797 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNSRIAEEVNCLLACRDDS
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAPQ
SPAGYMPYSHPSSYTTHQQMQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPRH
GSSDDYLHMVHRLSSDDGDSSTMRNATSFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQS
LPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQNEKAAMYDIISSPTKDSTKLTLR
LSRVKSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCLS
QQEQTAFLPANQVPVLQQNTSVATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERIE
RESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALMV
SIDLHQAGRVDSQASITQDSDSIKKPEEIKQCNDAPSSVLQEDIVGSLKSIPENHPETPK
KKSDSELSKSETKQNESRLSESKPNENELVETKSNESKLETKTETQTEELKQNENKAAES
KQNESTVVEPKQNESRLCDTKPNDNKQNNTRSETTKSRPETPKQKAESRPETPKQKGEGR
PETPKQKGDGRPETPKQKGEGRPETPKQKGEGRPETPKHRHENRRDAGKPSTEKKPDVSK
HKQDIKSDSPRLKSERAEALKQRPDGRSESLRRDHDSKQKSDDRGESERHRGDQSRVRRP
ETLRSSSRNEHNVKSDGSKPEKLERKHRHESGDSRDRTPGEQKSRPDSPRVKQGDTNKSR
PGFKSPNSKDDKRTEGNRSKVDSNKAHTDNKAEFPSYLLGGRSGALKNFVIPKIKRDKDG
NITQETKKMDIKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREDKSRSS
LKSIKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAE
ISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRSSGGGRYR
NRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIE
NILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKVLN
ILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPNMPKAV
YIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDTHGGGLLSSKAKRAKCSTHKQRVIVMLY
NKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYEK
HRQLILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPSS
EKDPNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFVQ
DLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVTS
KMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTLE
TEKAMKSQKDEESSDGAHHAKEIETTGQIMHRAENRKKFLRSIIKTTPSQFSTLKMNSDT
VDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSIL
ARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKR
VIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEAMT
RKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKYEE
SLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNV
AKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNFKFVW
ACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFKGNSKV
NIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNNILSDKNSSV
NLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQVL
EAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEIDK
KYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIRGNRQHRR
AFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQS
FKESMVKDKRKERKTSPTKENESSESEEEVSRPRKSRKRVDSDSDSDSEDDVNSVMKCLP
ENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVH
FHPKQTLDFLRSDMANTKLTEEVKRSIVRQYLDFKLLMEHLDPDEEEEEGEVSASTNARN
KAITSLLGGGSPKNNTAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDV
MDVIAICCPKYKDRPQIARVVQRTSSGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIK
ESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8394 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccataactactcttgcggggatcgctagtctcaca
gacctcctgaaccagctgcctcttccatctcctttacctgctacaactacaaagagcctc
ctctttaactcacgaatagcagaagaggtgaactgccttttggcctgtagggatgacagt
ttggtttcacagcttgtccatagtctcaaccaggtatcaacagatcacatagaactgaaa
gataaccttgggagcgatgacccagaaggtgatataccagtcttgttgcaggccgtcctg
gcaaggagtccaaatgtcttcagggagaaaagcatgcagaacagatatgtacaaagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtcctgcatcttccaat
taccaacaaaccactatctcacatagcccctccagccggtttgtgccaccacagacaagc
tctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatatgccccacag
agccctgcaggatacatgccatattcccatccttcaagttacacaacacatcaacagatg
cagcaagcatcagtatcaagtcctattgttgctggtggcttgagaaacatccatgataac
aaagtttctggtccattatctggcaactcagctaatcatcatgctgataaccctagacat
ggctcaagtgatgactacctacacatggtgcacaggctaagtagtgatgatggtgattct
tcaacaatgaggaatgctacatcttttcctttgaggtctcctcagccagtgtgttctcct
gctggaagtgatggaacacctaaaggatcaagaccacctttaattctacaatctcagtct
ttaccttgttcatcacctcgagatgttcctccagatatcttgctagattctccagagaga
aaacaaaaaaagcaaaagaaaatgaaattaggcaaggatgaaaaagaccagaatgagaaa
gctgcaatgtatgatataattagttctccaaccaaggactctactaaacttacgttaaga
ctttctcgtgtaaagtcttcagatatggaccagcaagaggatatgctatctggtatggaa
aatagcaatgtttcagaaaatgatattccttttaatgtgcagtatcctggacagacttca
aaaacacccattactccacaggacgtaaaccgcccacttaatgctgctcagtgtttgtcg
cagcaagaacaaacagcattccttccagcaaaccaagtgcctgttttacaacagaacact
tcagttgctacgaaacaaccacagacttctgtagtacagaatcagcaacaggtatcacag
caggggccgatatatgatgaagtggaattggatgcattggctgaaattgagcggatagaa
agagaatcagccattgaaagggagcgcttctcaaaggaagttcaagataaagataaacct
ttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggtaat
agaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatggtt
agcattgatcttcatcaggcaggaagagtggactctcaggcttctataactcaggattca
gactccataaaaaagcctgaagaaatcaaacagtgtaatgatgcacccagttctgttctt
caggaagatattgttggaagtcttaagtctataccagaaaaccatcctgagacacctaaa
aaaaagtctgattctgagctctccaaaagtgaaacgaaacaaaatgaaagtaggttgtca
gaatctaaaccaaatgaaaacgagctggtggagacaaagtcaaatgaaagtaagttagaa
actaaaactgaaacccaaacagaagaacttaaacagaatgagaacaaagctgcagaatca
aaacaaaatgagagcactgtagttgagcctaagcaaaatgaaagtagactatgtgacaca
aaaccaaatgacaacaaacagaacaataccaggtcagaaacaacaaaatcaagacctgaa
accccaaagcagaaagctgaaagccggcctgaaactccaaaacaaaagggtgaaggtcga
cctgaaaccccaaaacagaagggtgatggacgacctgagactccaaagcaaaagggtgaa
ggccggccggaaactccaaagcaaaaaggtgaaggccggcctgaaaccccaaaacacagg
catgaaaataggagggatgctggaaagccatcaacagagaaaaaacccgatgtgtctaag
cataaacaggatatcaaatctgactcacctcgcttaaaatcagaaagagctgaagcctta
aaacagagacctgatgggcgatctgagtcattaagacgcgaccatgatagtaaacagaaa
tcagacgacaggggtgagtcagaacgacatcggggggatcagtcaagggttcgaagacca
gaaacactgagatcttctagtagaaatgaacataatgttaaatctgatggttcaaaacct
gagaagctagaaagaaaacacaggcatgaatcaggggactcacgggacagaactcctggg
gaacaaaaatcaagaccagatagtcctcgtgtaaaacaaggagatactaataagtcaaga
cctggttttaaatcaccaaatagtaaagatgacaaaaggacagagggtaacagaagtaaa
gtagacagtaataaagcgcacactgacaataaggctgaatttccaagctatttgttgggg
ggcaggtctggtgcattgaaaaatttcgtcattccaaaaatcaagagggataaagatggc
aatattactcaggaaactaagaaaatggacataaaaggagagcagaaagacaaagtagaa
aaaatgggattagttgaagatctaaacaaaggcgctaagcctgtagttgttctgcaaaaa
ctgtcgctggatgatgtccagaagctaataaaagatagagaggataaatcaagaagttcc
cttaagtctatcaagaataagccatccaagtcaaataaaggtagtatagatcaatcagtg
ttaaaagaattgccccccgaactcctggcagaaattgaatctaccatgccactttgtgaa
cgtgtgaaaatgaacaaacgcaagcgtagcacagttaatgaaaagccaaaatatgctgaa
atcagttcagatgaagataatgatagtgatgaagcttttgaatcctctaggaaacggcat
aaaaaagatgacgataaagcttgggaatacgaagagcgtgacagaagaagctctggggat
cataggagaagtggccactcacatgaaggaagaaggagctcgggtggcggtcgttaccga
aaccgaagtccatcagattctgatatggaagattactctcctcctcccagccttagtgag
gttgctagaaaaatgaagaaaaaagaaaaacaaaagaaaaggaaagcttatgaaccgaaa
ttaacacccgaagaaatgatggattcttcaacttttaagagatttacagcctcaatagag
aatattttggataatttagaagatatggattttactgcatttggtgatgatgatgaaatc
cctcaggaactgctgttaggaaaacatcagcttaatgaacttgggagcgaatctgctaag
attaaagccatgggcataatggacaagctttcaactgataaaactgtgaaagtcctaaat
atattggagaaaaatattcaggatggatcaaagctttctactttgttaaatcataataat
gatactgaagaagaagaaagattgtggagagaccttattatggagagagttaccaaatca
gcagatgcttgtcttaccactatcaacatcatgacatctcctaacatgccgaaagctgtg
tacattgaagatgtaattgaaagagttatacagtacactaaatttcacttacagaataca
ctctatccccagtatgaccctgtttacagattagatacgcatggaggagggttattaagt
tcgaaggccaagcgggctaaatgttctactcataagcagagagtaatagtaatgctttat
aacaaagtttgtgacattgttagtagcttatcagaactgctagagatacagcttcttaca
gacacaacaattcttcaggtttcatcaatgggaataacaccattttttgtggaaaatgtc
agtgaactacaattgtgtgctattaagttagtcactgcagtattctcaagatatgaaaag
cataggcagttaatattggaagaaatttttacttcacttgcaagattaccaactagcaag
agaagtttaaggaatttcaggttaaatagtagtgatgtggatggagaacctatgtatatt
cagatggttacagcactggttttacaacttattcagtgtgtagttcacttaccatcatca
gagaaggaccctaattcagaagaagactcaaacaaaaaagttgaccaggatgttgttatt
actaattcttatgaaacagctatgagaacagcccaaaactttctttctatcttccttaaa
aaatgtggtagtaagcaaggtgaagaagattacagaccactttttgaaaattttgttcaa
gaccttctttcaacagtcaataagcccgagtggccagctgctgaactactccttagtttg
ttagggagactgttggttcatcagtttagtaataagtcaacagaaatggctttaagagtg
gcatctcttgattaccttggaactgttgctgcgcgactgagaaaagatgctgttaccagc
aagatggatcaagggtccatagaaagaattttaaagcaggtttctggaggagaagatgaa
atccaacaattgcaaaaggcattgcttgattatttggatgagaacactgagactgaccct
tcactggtgttttctcgtaaattctatatagcccagtggtttcgtgacacaactctggaa
acagaaaaggcaatgaaatcacaaaaagatgaagagtcctctgatggggcacatcatgca
aaagaaattgagacaactggtcaaataatgcatcgagctgaaaaccggaaaaagttcctt
agaagcattatcaaaaccacaccatctcagttcagcacattaaagatgaactcagatact
gtggactatgatgatgcgtgcttgattgtccgatacttggcctctatgaggccgtttgcc
cagagttttgatatttatttgacgcagatactacgagttcttggtgaaaatgcaattgct
gttcgaacaaaagccatgaagtgtttatctgaggttgttgctgtagaccccagtattcta
gcaaggcttgacatgcagcgaggagttcatggacggttaatggataactccactagtgtt
cgagaggcagccgtggaattactaggtcgatttgtcctttgtcgacctcagcttgctgag
cagtattatgatatgctgattgaaagaatattggatactggtatcagtgtcaggaaaagg
gtaataaagattttaagagacatctgtattgaacaaccaacatttccaaaaattacagaa
atgtgtgtaaaaatgattcgtagagtcaatgatgaagagggcattaagaaattagtaaat
gaaacattccaaaaactctggtttactccaactccacataacgacaaagaagcaatgaca
aggaagatcttaaacatcactgatgtggttgcagcatgtagagatactggatatgattgg
tttgagcaactccttcaaaatttgttgaagtctgaagaggattcctcatataaacctgtg
aagaaagcttgtactcaacttgttgataacctagttgagcatattcttaaatatgaggag
tctctagctgactcagacaataaaggtgtgaattctggaagattggtagcttgtataacc
actttgttcttattcagcaaaataagaccccaactcatggttaagcatgccatgactatg
cagccataccttaccactaaatgtagtacgcaaaatgatttcatggttatctgcaatgtt
gcaaaaatccttgagttagttgtaccattgatggaacacccaagtgagactttccttgct
actattgaagaagacctgatgaagctgattatcaaatatggcatgactgtagtacagcat
tgtgtgagctgtcttggggctgttgtaaataaagtgacacagaattttaagtttgtgtgg
gcctgtttcaatagatactacggtgccatttcaaaattaaaaagtcaacaccaagaagac
ccaaataacacttcccttttaacaaataagccagcgcttcttaggtccctcttcactgtt
ggagcactctgtcggcattttgactttgatctggaagactttaaaggcaacagtaaggtt
aacataaaggataaagtacttgagctgttgatgtattttacgaaacactcagatgaagaa
gtacaaacaaaagccatcattggtctaggctttgcctttatacagcatccaagtctaatg
tttgagcaagaagtgaagaatctgtataataatattttatctgataagaactcctcagtg
aatttaaaaatacaagtgttaaaaaacctccagacttacctacaagaagaagacacgcgc
atgcagcaagcagacagagactggaagaaagttgcaaaacaggaagacctaaaagaaatg
ggagatgtttcctcggggatgagtagctccatcatgcagctttacctcaaacaggtgctt
gaggccttctttcacacccagtcaagtgtccgccactttgccctcaatgtgattgcgtta
actctaaaccagggtcttattcatccagttcagtgtgttccatatttaattgccatgggc
acagatccagaacctgctatgaggaacaaggctgatcagcagcttgtggaaatagacaag
aagtatgctggattcattcatatgaaagcagtggctggtatgaagatgtcttaccaggta
caacaggcaatcaacacgtgcctaaaagatcctgtcaggggtttccgacaagatgagtca
tcgagtgctttgtgctcacacctctactccatgatccgtgggaaccgccagcacagacgc
gccttccttatttccttactcaacctctttgatgacacagcaaaaactgaagtcactatg
ctcttgtacatagcagacaatctagcctgtttcccgtaccagactcaggaagagccgttg
tttataatgcatcacatagacattacactctctgtttccggtagtaacctattacagtca
ttcaaggagtctatggtgaaggacaaaaggaaagaaaggaaaacgtctcctaccaaggag
aacgagtccagtgagagcgaagaggaagtttccaggcctcggaaatctcggaagcgggta
gattcggattccgattccgactctgaagatgatgtcaactcagtaatgaagtgtctgcca
gaaaattcagcccctttaattgaatttgcaaatgtttcccagggtattttattactcctt
atgttaaaacaacatctgaagaatctctgtggattttctgatagtaaaattcagaaatat
tctccatctgaatctgcaaaagtatatgataaagccattaaccgaaaaacaggggttcat
tttcaccccaaacaaacactggacttcctgcgaagcgacatggctaacaccaagctaacg
gaggaggtgaagaggagcatagtgaggcagtacctggactttaaacttctcatggaacac
ctggaccctgatgaagaagaagaggaaggcgaggtgtcggccagtacgaatgctcggaac
aaagcaattacctcgctgcttggaggaggcagccctaaaaataacacagcagcagagaca
gaagatgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattgagaagg
tcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgacgtc
atggatgtcatcgctatctgctgtccaaagtacaaagaccgaccacaaattgcaagagta
gtacagagaaccagcagtggcttcagtgttcagtggatggcaggctcctacagtggctcc
tggacggaggctaagcgccgcgatggccgcaaactggtgccttgggtagacactattaaa
gagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaataaa
gttgttcagactttacgatccctgtatgccgccaaggacgggacttccagctaa
DBGET
integrated database retrieval system
