Arvicola amphibius (Eurasian water vole): 119809042
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Entry
119809042 CDS
T08327
Symbol
Arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04270
Vascular smooth muscle contraction
aamp04360
Axon guidance
aamp04611
Platelet activation
aamp04625
C-type lectin receptor signaling pathway
aamp04810
Regulation of actin cytoskeleton
aamp05135
Yersinia infection
aamp05152
Tuberculosis
aamp05163
Human cytomegalovirus infection
aamp05200
Pathways in cancer
aamp05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119809042 (Arhgef12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
119809042 (Arhgef12)
04625 C-type lectin receptor signaling pathway
119809042 (Arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
119809042 (Arhgef12)
09158 Development and regeneration
04360 Axon guidance
119809042 (Arhgef12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119809042 (Arhgef12)
05205 Proteoglycans in cancer
119809042 (Arhgef12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
119809042 (Arhgef12)
09171 Infectious disease: bacterial
05135 Yersinia infection
119809042 (Arhgef12)
05152 Tuberculosis
119809042 (Arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119809042 (Arhgef12)
Membrane trafficking [BR:
aamp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119809042 (Arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
PH_13
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Ribonuc_2-5A
DUF3967
Motif
Other DBs
NCBI-GeneID:
119809042
NCBI-ProteinID:
XP_038177652
LinkDB
All DBs
Position
3:complement(110979971..111115228)
Genome browser
AA seq
1542 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIRSGSYVALTVQGRPPGSPQIPLADSEVEPSVIGHMSPIMTSPHSPG
AAGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEEYNRTGTPRLLKEIQ
ETKKHISQLQEQLSKATGSAQDGTVIAPSRPLGDALTVSEAEADPGDGPCRTDGSSGDAS
RPSSDNADSPKSSLKERIYLEETPEKSEGIQDTDTQSLVGSPSTRGAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVPVPEEISLDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRNMGLTLAESELTKLDAERDKDRVTLEKERACAEQIVTKIEEVLMTAQPVEEER
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEDKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMEIQKLRHPKHLSAPSSVSPEPQDPAKLRQSGLASEGTDTGY
LPASTISSATSGAALSQEGGKEHDAGSKQVGEAPVPGDCLDSTPRVSNTVFDFPPPLLDQ
VQEEECEVERMAEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHVGLNEQMKTVRKRNETSVIDHIGEDLLVWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPPEKEKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKMSEYPNVDELRNLDLTKRKM
IHEGPLVWKVNRDKSIDLYTLLLEDILVLLQKQDDKLVLRCHSKILASTADSKHTFSPVI
KLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQSPPCEGDNDDEEPSKVEHHGLSVTGLQSPDRVLGLESPLISSKPQSRSLSTPGK
SEAEHLFVTATQFAKEQHANGTLKEDNGSYPIPVPEPHLPVSEERWALDALRNLGLLKQL
LAQQFGLTEKSTQEDWQSFSRYGSASEEGQAESGIQDSENVKACHAGEGQMPFKTGTGDF
ATCDSPRTSTESCATQDSVILASQDSQASNILVMDHMILTPEMPTAEPEGGLDDSGEHFF
DAREAHSDDNPSEGDGAVKKEEKDVNLRISGNCLILDGYDAVQESSTDEEVASSFTLHSV
AGIPSVDSTHQQQYSPQNAHSDGAVSPFTPEVLVHRRWRAMEDTCFEIQSPSSCTDSQSQ
ILEYIHKIEADLEHLKKVEESYALLCQRLASSALPDKLSDKS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcacggacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaatcgagagtcaccaacagataagaaacagaaagttgaacgcagtaca
tcccatgattttgatcccacagatagctcctccaagaagacaaagtctagttcagaggaa
agtagatccgagatctatggccttgttcaacgctgtgtgatcatccagaaagacgacaat
ggatttgggctgacagtcagtggagacaatccagtcttcgtacaatctgtcaaagaagat
ggagcagccatgcgggctggagtacaaacaggtgaccgaatcatcaaggtgaatgggact
ctggtgactcattcaaaccatctggaggtggtgaaactaatcagatctggttcctatgta
gctctcactgtccagggacgcccacctgggtcgccccagattccacttgctgactctgaa
gtagaaccctcagtcattggacatatgtctcccattatgacatcccctcattcccctgga
gcagctgggaatatggagagaattactagtcctgtgctcatgggggaggaaaacaatgtg
gtccataaccagaaagtagagattctgaggaaaatgttacagaaagaacaggagcggctg
cagttactgcaggaagaatacaaccgaacaggtaccccaagattgctcaaggagatccag
gagaccaagaagcacatttctcagctgcaggagcagctgtccaaagccacaggctctgct
caggatggcactgtaattgcaccctctaggccgttaggtgatgccctaacagtcagtgag
gcagaagcagatcctggagatggcccgtgcaggactgatgggagcagtggagatgcttct
cggcctagtagtgacaatgcagatagtcccaagagtagtctgaaagaaagaatttatcta
gaggaaaccccagagaaaagtgaaggaattcaggacactgacacacaatcgctcgtcggc
agtccctccacccgtggagcacctcatatcattggagcagaggatgatgactttggtact
gaacatgagcagatcaatgggcagtgcagctgtttccagagcattgaattgctgaaatca
cgccctgctcacttggctgttttcttgcaccatgtagtttcacagtttgatcctgcaaca
ttgctctgttatctctattcagacctgtataagcagaccaactccaaggagactcggcgt
gtcttccttgagtttcatcagttcttcctggaccgatctgcacatctgaaagttcctgtt
cccgaggaaatctcactggatctagaaaagagaagacccgagcttattcctgaggacctg
catcggcactacattcaaactatgcaggagagagtccaccctgaagttcagaggcattta
gaggattttcgacagaaacgtaacatgggactaaccttggcggagagtgagctgactaag
cttgatgcagagagagacaaggaccgggttactctggagaaggagcgagcatgtgcggaa
cagatcgttaccaaaattgaagaagtattgatgactgctcagcctgtggaggaagaaagg
agttccacaatgcagtatgtgattctcatgtacatgaagcatttgggagtaaaagtgaaa
gaacctcgaaacttggagcacaagcggggtcgaattggattccttccaaagatcaagcaa
agcatgaagaaagatagagagggtgaagacaaagggaagcgaagaggattccccagcatt
ttgggacccccaaggagaccaagccgccatgacaacagtgcaattggcagggccatggag
atacagaaactacgtcacccgaagcacttatctgcaccctcgtctgtgagtcctgagcct
caggaccctgccaagttgcgccagagtggactagccagtgaaggaacagacactggatac
ctgcctgccagtaccatatcctctgccacttcaggagctgctctttcccaagagggaggg
aaagaacatgatgcaggatcaaaacaagttggagaagcaccggtgcctggagactgcttg
gacagcacacctcgtgtctccaatactgtttttgacttcccacctcctctgttagatcaa
gtgcaggaggaggaatgtgaagtagagaggatggcagaacatggaaccccaaaacccttt
agaaagtttgacagcatcgcctttggagagagtcagagtgaagatgagcagtttgagaat
gacctggagacggaccctcccaactggcagcagcttgttagcagagaggtcttactggga
ctgaaaccttccgagatcaaaagacaggaagtgattaatgaattgttctacactgaaaga
gctcatgtccgaacactgaaggttcttgaccaagtattctatcagcgtgtatccagagaa
ggaattctatcaccttcagaactacgcaagattttttcaaacttggaagatattcttcaa
cttcatgttgggttgaatgagcaaatgaaaactgtccggaagaggaatgagacctctgtt
attgatcatattggggaagatctgcttgtctggttcagtggaccaggagaagagaagttg
aaacatgctgctgctacattctgcagtaaccagccttttgctctggaaatgatcaagtct
cgtcagaaaaaggattctcgattccagacttttgtgcaggatgctgagagtaaccccctg
tgtcgtcgccttcagctgaaagatatcattcccacccaaatgcagaggctcaccaagtac
ccacttcttttggataatattgccaaatacacagaatggccaccagaaaaggaaaaggtg
aagaaagctgcagatcattgtcgtcagatcttaaattatgtaaatcaggctgtcaaggag
gcagaaaacaagcagcgtttagaagattatcagcgtcgccttgacacctccaatctcaag
atgtccgagtacccaaatgttgatgaactcaggaatttggatttaacaaaaagaaagatg
attcatgaagggcctttggtttggaaggtgaatcgagataaaagcatcgatctttacaca
ctgctactggaagacattcttgtactgttgcaaaaacaggatgacaaactggtgttacgg
tgccatagtaagattctggcatccacagccgacagcaaacacacattcagtcctgtcatt
aagctgagcacagtgttggttcgacaggtggcaacagataacaaagctttatttgtcatc
tctatgtcagataacggagcccaaatttatgaattggtagcacagacagtttctgaaaag
acggtctggcaggacctcatctgtcgaatggctgcttcagtgaaggagcagtccacaaag
cccattcctctgccacagtcgccaccttgcgaaggagacaatgacgacgaagaaccatca
aaagtggagcaccatggcctttcagtcactggtctacagagcccagacagagttttggga
ttagaatcgcccttaatttcatcaaaacctcagtctcgttcactgagtacccctggcaaa
tcagaggcagaacatctctttgtgactgcaacacagtttgcaaaggagcagcatgcaaat
gggacactgaaggaagataatggcagttatccaatcccagtcccagagccacacttgcct
gtgtcagaggagcggtgggcgttagacgcactgagaaatttgggcttgttgaagcagctg
ctggcccagcagtttggtctgactgagaagagcacccaggaagactggcagtccttctca
agatacgggtcagcttctgaagaggggcaggcagagagtggcatccaggactctgaaaat
gttaaggcttgtcatgccggggaaggacagatgccttttaaaactggaactggtgacttt
gcaacttgtgacagtccacggacttcaactgagtcttgtgctacacaagattcagtgata
ctggcatcccaagacagccaggcaagtaacattttagtaatggaccacatgatcctgacc
ccagagatgcctactgcagagccagaagggggtctggatgacagtggagagcactttttt
gatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagttaaaaag
gaagagaaggatgttaatttacgcatctcaggaaactgtttgatccttgatggctatgat
gcagtgcaggagagctccacagatgaggaggttgcctcctcattcaccctgcactctgta
gcaggcatcccttctgtggactccacccaccagcagcaatactcccctcagaatgctcat
tctgatggggcagtttcaccattcaccccagaagtcctggtccatcgacgctggagagct
atggaggatacctgttttgagatccagagtccctcttcttgtacagattcacaaagccaa
atcctggagtatattcataaaatagaggctgacctcgaacacttaaagaaggtggaagaa
agttacgcccttctttgccaaaggctggctagctcagccctccctgacaagctctcagat
aaaagttag
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integrated database retrieval system
