Arvicola amphibius (Eurasian water vole): 119809118
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Entry
119809118 CDS
T08327
Symbol
Limd1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04390
Hippo signaling pathway
aamp04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
119809118 (Limd1)
04392 Hippo signaling pathway - multiple species
119809118 (Limd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119809118 (Limd1)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119809118 (Limd1)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
119809118 (Limd1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
119809118 (Limd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf-ChsH2
Motif
Other DBs
NCBI-GeneID:
119809118
NCBI-ProteinID:
XP_038177823
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All DBs
Position
3:188860563..188913050
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AA seq
657 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGASNNPEFEETRRVFATKMAKIHLQQQ
QQQQQLLQEEALSRAGRSPVNGGSRQGVSSKLTADGAAKPPLAAPAVAPGLTTAPVAVPP
SDPSHEQRARPSAHGARPGSQNCGSREAPVSSQRPALHGLGPCEDPSCLTHGDYYDNFSL
ASPQWGDKPEAASSMNLSVKSGWPGGPGNDSPLPRSCGDHHPYQPQFPMCSSGIGGQDGS
VTGRGNVKPTGLWSTASSQRVNLGFSSLGLENGAPAQPRAPLVPNSTSQGARLRRDSGLG
CEASGRVLKPTVDPQPWLQDGPRSYLSVSAPLSSTTAKDSTQPGVTPGLGPKPASIDSGT
GPKPSPTSLVHPVMSTPSELSCKEGPPSWSPDSSLRPLLSESSTPTKVRLPCQTLTPSPE
LGPSTAELKLEALTQRLEQEMDAHPKADYFGACVKCGKGVFGAGQACQAMGDLYHDACFT
CAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDMILQALGKSYHPG
CFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPPEGSDETIRVVSM
DRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRLEKGPSPAAVHQHHF
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggataaatatgacgacctgggcctggaggccagtaagttcatcgaagacctgaacatg
tacgaggcctccaaggatggactcttccgggtggacaaaggtgcgagcaacaaccctgag
tttgaggaaactcgaagggtgtttgcgaccaagatggccaaaatccacctccagcaacag
cagcagcaacagcagctcttacaggaggaggccctgtctagggctggcagaagccctgtc
aacggtgggagccggcagggtgtgagcagcaagctgaccgcagatggtgctgccaagccc
cctctggctgcgccagcagtggcacctggattaaccaccgcccctgtggctgtgccacct
tcagacccatcgcatgagcagagggccaggccatccgcccatggggcaaggcctggcagt
cagaactgtggttccagggaggcgcctgtgagttcccagaggcctgctttgcacggcctg
ggtccctgtgaagacccttcctgcctcactcacggagactattatgacaatttctccttg
gcaagcccacagtggggtgataagccagaagcagcctccagtatgaatctgagtgtaaag
agtgggtggccgggtggccccgggaatgattccccattgcccagatcctgcggggaccac
cacccttaccagccgcagttccccatgtgctcaagtggcatcggtggccaggatggtagc
gttactggccgcggcaatgtgaagccaacaggcctttggtctactgcctcctctcagcga
gtgaacctcggcttttcctctctgggcttagagaatggggccccagctcaaccgagggca
cctctggtccctaacagcactagccagggagctcgtctgagaagagattcaggtctggga
tgtgaggcttcaggcagggtcctcaaacctactgtggaccctcagccttggctccaggat
gggcccaggtcttacctctctgtttctgctccattatcctcaacaactgccaaggacagt
acccagccaggtgtgactccggggctgggtcctaagcctgcaagcatagactctggcact
ggtcccaagcccagccctaccagccttgtccatccggtgatgtccactccatctgagtta
tcttgtaaagagggtcctcccagctggtcccccgacagtagcctgagacctctgctctca
gagagttccacccccaccaaggtgaggttgccctgccagaccctcacaccaagcccagag
cttggaccctccactgctgaattgaaactagaagcccttacccagcgtctggagcaagag
atggacgctcatcccaaagctgattactttggagcctgcgtgaaatgtggtaaaggcgtg
tttggagcgggccaggcctgtcaggccatgggggacctctaccacgacgcgtgtttcacc
tgtgcagcctgcagccggaagttaagaggaaaagccttctattttgtcaacggcaaagta
ttctgcgaggaagactttttgtactctggctttcagcagtctgccgacaggtgcttcctt
tgtggccatctgatcatggacatgatcctgcaggccctagggaagtcctaccaccctggc
tgtttccgctgtgtcatctgtaacgagtgtctggatggggtgcctttcaccgtggactcc
gagaacaagatctactgtgtccgggattaccacaaggtgctggccccaaagtgcgcagcc
tgcgggcttcccatccttccaccagagggctcagatgagaccatccgtgtggtgtccatg
gacagagactaccacgtggagtgctaccactgtgaggactgtggtctagaactcaatgat
gaggatggtcaccgctgctacccgctggaggaccacctgttctgtcactcctgccatgtc
aagaggctggagaaaggaccctcccctgcagccgtccaccagcaccacttctag
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