KEGG   Arvicola amphibius (Eurasian water vole): 119809118
Entry
119809118         CDS       T08327                                 
Symbol
Limd1
Name
(RefSeq) LIM domain-containing protein 1
  KO
K16682  LIM domain-containing protein
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04390  Hippo signaling pathway
aamp04392  Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    119809118 (Limd1)
   04392 Hippo signaling pathway - multiple species
    119809118 (Limd1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aamp03019]
    119809118 (Limd1)
   03036 Chromosome and associated proteins [BR:aamp03036]
    119809118 (Limd1)
Messenger RNA biogenesis [BR:aamp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119809118 (Limd1)
Chromosome and associated proteins [BR:aamp03036]
 Eukaryotic type
  Sister chromatid separation proteins
   Aurora kinases
    Regulators of Aurora kinases
     119809118 (Limd1)
SSDB
Motif
Pfam: LIM zf-ChsH2
Other DBs
NCBI-GeneID: 119809118
NCBI-ProteinID: XP_038177823
LinkDB
Position
3:188860563..188913050
AA seq 657 aa
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGASNNPEFEETRRVFATKMAKIHLQQQ
QQQQQLLQEEALSRAGRSPVNGGSRQGVSSKLTADGAAKPPLAAPAVAPGLTTAPVAVPP
SDPSHEQRARPSAHGARPGSQNCGSREAPVSSQRPALHGLGPCEDPSCLTHGDYYDNFSL
ASPQWGDKPEAASSMNLSVKSGWPGGPGNDSPLPRSCGDHHPYQPQFPMCSSGIGGQDGS
VTGRGNVKPTGLWSTASSQRVNLGFSSLGLENGAPAQPRAPLVPNSTSQGARLRRDSGLG
CEASGRVLKPTVDPQPWLQDGPRSYLSVSAPLSSTTAKDSTQPGVTPGLGPKPASIDSGT
GPKPSPTSLVHPVMSTPSELSCKEGPPSWSPDSSLRPLLSESSTPTKVRLPCQTLTPSPE
LGPSTAELKLEALTQRLEQEMDAHPKADYFGACVKCGKGVFGAGQACQAMGDLYHDACFT
CAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDMILQALGKSYHPG
CFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPPEGSDETIRVVSM
DRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRLEKGPSPAAVHQHHF
NT seq 1974 nt   +upstreamnt  +downstreamnt
atggataaatatgacgacctgggcctggaggccagtaagttcatcgaagacctgaacatg
tacgaggcctccaaggatggactcttccgggtggacaaaggtgcgagcaacaaccctgag
tttgaggaaactcgaagggtgtttgcgaccaagatggccaaaatccacctccagcaacag
cagcagcaacagcagctcttacaggaggaggccctgtctagggctggcagaagccctgtc
aacggtgggagccggcagggtgtgagcagcaagctgaccgcagatggtgctgccaagccc
cctctggctgcgccagcagtggcacctggattaaccaccgcccctgtggctgtgccacct
tcagacccatcgcatgagcagagggccaggccatccgcccatggggcaaggcctggcagt
cagaactgtggttccagggaggcgcctgtgagttcccagaggcctgctttgcacggcctg
ggtccctgtgaagacccttcctgcctcactcacggagactattatgacaatttctccttg
gcaagcccacagtggggtgataagccagaagcagcctccagtatgaatctgagtgtaaag
agtgggtggccgggtggccccgggaatgattccccattgcccagatcctgcggggaccac
cacccttaccagccgcagttccccatgtgctcaagtggcatcggtggccaggatggtagc
gttactggccgcggcaatgtgaagccaacaggcctttggtctactgcctcctctcagcga
gtgaacctcggcttttcctctctgggcttagagaatggggccccagctcaaccgagggca
cctctggtccctaacagcactagccagggagctcgtctgagaagagattcaggtctggga
tgtgaggcttcaggcagggtcctcaaacctactgtggaccctcagccttggctccaggat
gggcccaggtcttacctctctgtttctgctccattatcctcaacaactgccaaggacagt
acccagccaggtgtgactccggggctgggtcctaagcctgcaagcatagactctggcact
ggtcccaagcccagccctaccagccttgtccatccggtgatgtccactccatctgagtta
tcttgtaaagagggtcctcccagctggtcccccgacagtagcctgagacctctgctctca
gagagttccacccccaccaaggtgaggttgccctgccagaccctcacaccaagcccagag
cttggaccctccactgctgaattgaaactagaagcccttacccagcgtctggagcaagag
atggacgctcatcccaaagctgattactttggagcctgcgtgaaatgtggtaaaggcgtg
tttggagcgggccaggcctgtcaggccatgggggacctctaccacgacgcgtgtttcacc
tgtgcagcctgcagccggaagttaagaggaaaagccttctattttgtcaacggcaaagta
ttctgcgaggaagactttttgtactctggctttcagcagtctgccgacaggtgcttcctt
tgtggccatctgatcatggacatgatcctgcaggccctagggaagtcctaccaccctggc
tgtttccgctgtgtcatctgtaacgagtgtctggatggggtgcctttcaccgtggactcc
gagaacaagatctactgtgtccgggattaccacaaggtgctggccccaaagtgcgcagcc
tgcgggcttcccatccttccaccagagggctcagatgagaccatccgtgtggtgtccatg
gacagagactaccacgtggagtgctaccactgtgaggactgtggtctagaactcaatgat
gaggatggtcaccgctgctacccgctggaggaccacctgttctgtcactcctgccatgtc
aagaggctggagaaaggaccctcccctgcagccgtccaccagcaccacttctag

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