Arvicola amphibius (Eurasian water vole): 119809120
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Entry
119809120 CDS
T08327
Symbol
Prdm10
Name
(RefSeq) PR domain zinc finger protein 10 isoform X1
KO
K24643
PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119809120 (Prdm10)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119809120 (Prdm10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_2
zf-met
zf-C2H2_6
Zn_ribbon_PRDM4
SET
Zf-C2H2_ZNF451
zf-Di19
DUF629
zf-C2H2_STOP2_C
RNA_pol_3_Rpc31
zf-C2H2_7th_ZNF462
LIN37
Motif
Other DBs
NCBI-GeneID:
119809120
NCBI-ProteinID:
XP_038177824
LinkDB
All DBs
Position
3:99682494..99789330
Genome browser
AA seq
1147 aa
AA seq
DB search
MDSKDESSHVWQTSADHEQNTAQVHFVPDAGTVAQIVYTDDQVRPPQQVVYTADGASYTS
VDGPEHTLVYIHPVEAAQTLFTDPAQVAYVQQDATAQQVLPSIESVDGSDPDPLATLQNP
IARLDGKEEEDEEEDEDEDSEEEEEEDAEDTDVDDWQPDPPRPFDPHDLWCEECNNAHSS
VCPKHGPLHPIPNRPVLTRARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRGS
ELKDCYIHLKVSLDKGDRKDRDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYG
HHVYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRF
ISSEQLQQHLNSHDEKLDVFTRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKS
DDGTQDLLHFPTKEQFDEAEPASLNGLDQPEQASIPIPQLPQETPSSLEQEPETHTLHLQ
PQQEETVLPAQTTLTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQH
LRFHGREGNCPLTCDLCNKGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVA
IHINDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSD
RKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFK
CRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRK
AHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTK
MVQHIRKKHPEYAQLPNTIHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAMTELSQ
TLTTDYRTPQGDYQRIQYIPVSQSASGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVGQL
HDPQTYTQHAIHVQHIQVTEPAAAAPSSSQVAGQPLSPTTQQAQQGLSPSHIQGSSSTQG
QALQQQNSSVQHTYLPNAWNSFRGYSSEIQMMTLPPGQFVITDSGVATPVTSGQVKAVTP
GHYVLAESQPELEEKQTSALSGAVQVQPSAHSDSLDSTSPSQQQTTQYIITTTTNGSGSS
EVHITKP
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggattccaaagatgaaagctcccacgtgtggcagacatctgcggaccatgagcagaac
actgcacaggtgcactttgttccggatgctggaactgtggctcagattgtatacactgat
gaccaagttcgtccaccccagcaggtggtgtacacagcagatggtgcctcctacacatca
gtggatggtccagagcacacactggtgtacatccacccggtggaagctgcacagactctg
tttacagacccagctcaggtagcttacgtccagcaagatgccacagctcaacaggtgctg
ccttccattgagagtgtggacggttccgaccctgatcctctggcaactctgcagaaccca
attgctagactagatggaaaagaggaagaggatgaggaagaggatgaggatgaggattca
gaggaagaagaggaagaggatgctgaagacactgatgtggatgattggcagcctgaccca
ccccggccttttgacccccatgatttgtggtgtgaagagtgtaacaacgcgcattcttct
gtgtgcccaaagcatggccccttgcatccgatccctaaccggcctgtgctcactcgtgca
agggcgagtctgcctctggtcctctacatagacaggttccttgggggagtgttctccaaa
agacggattcccaagcgcacccagtttggccctgtagaggggcctctggtcagggggtcg
gagctgaaagactgctacattcatctcaaggtttctcttgataaaggagacagaaaagac
agggatttgcatgaagacctgtggtttgagttgtctgatgagaccctttgtaactggatg
atgtttgtgcgcccagcccagaaccacttagaacagaacctggtagcttaccaatatggc
caccatgtgtattacacgacaataaagaacgtggagcccaagcaggaactgaaggtgtgg
tatgctgcatcctatgctgagttcgtgaaccagaaaatccatgacatatctgaagaagaa
aggaaagtccttcgagagcaagagaagaattggccctgctatgagtgtaatcgccggttc
atcagctcagagcagctgcagcagcatctcaattctcatgatgagaaactagacgtgttt
accagaacaagaggtagaggacggggtcgaggaaagaggagatttggcccaggtcggcgg
cccgggcgtcctccaaaatttatccggttggaaatcaccagtgaaaacggggaaaagagt
gacgacgggacacaggacttgcttcatttccccacaaaggagcagttcgatgaggctgaa
ccagcttccctgaacggactggatcaaccagaacaagcatccatcccaatcccccagctg
ccacaggaaaccccatcttctctggagcaggaaccagaaacgcacaccttgcacctgcag
ccacagcaagaagagactgtactgcctgcccagaccactttgacagcagatgacatgcgc
agggccaaacgcatccgaaatgcagctcttcagcatctgtttatccggaagtccttccgg
ccttttaaatgtctgcagtgtgggaaagccttccgggaaaaggacaaactggaccaacac
ttgcgcttccatgggcgggaggggaactgcccgttgacctgtgatctctgtaacaagggc
ttcatcagcagcgcctccctggagagccacatgaagctccattctgaccagaagacttac
tcttgcattttttgcccagaatcatttgaccgccttgatttgttgaaagatcatgtggcc
attcacatcaatgatggctacttcacctgcccaacctgtaagaaacggttcccagatttt
atccaggtgaaaaagcacgtgcgcagcttccactctgaaaagatctaccagtgtaccgag
tgtgacaaggccttctgtcgccctgacaagctgagactgcacatgctccgccattccgac
cgcaaggacttcctgtgttccacctgtgggaagcaatttaagcgaaaagacaaactccgg
gagcacatgcaaaggatgcataatcctgaaagggaggccaagaaagctgaccgcatcagc
cgctccaagaccttcaaaccacgcatcacgtctacagactacgacagcttcacattcaag
tgccgattgtgcatgatgggcttccggaggcgaggcatgctggtgaatcacttatcaaag
aggcatccagacatgaagatagaagaggtgcctgagttaaccctccccatcataaaaccc
aaccgcgattacttctgtcagtattgtgataaggtttataagagtgccagcaaacgcaaa
gcccacattctgaagaaccacccaggagctgaactcccaccaagcattcgcaaacttcgt
cctgctggccccggggaacctgaccctatgctgagcacccacacccagctgactggcacc
attgccacccctcctgtctgctgcccacactgttccaagcagtatagcagcaagaccaag
atggtccaacacattcgaaagaaacatccagagtatgcccagctccccaacaccattcac
acaccgctgacgacagctgtgatcagcgccaccccagctgtcttaaccacagatagtgcc
actggagagactgtggtgacaacagacctgctaacacaggcaatgacagaactgtcccag
accttaacgacagattaccgaacacctcagggggactaccagaggattcagtatattcct
gtgtctcagtcagcatctggtctgcagcaacctcagcacatacagcttcaagtggtgcag
gtggctccggccacctccccacaccagtctcagcagtccacggtggatgttggccagctg
catgatccgcagacctacacgcagcacgccatccatgtgcagcacatccaggtcacagag
cccgccgctgcagctccatcatcatcccaggtagctgggcagccattgagccccaccact
cagcaagcacagcaggggcttagcccctcccatatccaaggcagttcttccacacagggg
caggctctacagcagcagaattcctctgtacaacacacatacctccccaatgcttggaac
tccttccgtggttattcttctgaaattcaaatgatgacgctgcccccgggtcaatttgtg
atcacagacagtggtgtggcgactcctgtcacctctgggcaagtgaaagcagtgactccg
ggtcattatgtattagcagaaagtcagccagaattggaggaaaagcaaacctctgccctc
tctggtgcagtccaggttcaaccctctgcacacagtgactccctggactccacaagcccc
agccaacagcagactacacagtacatcatcacgaccaccaccaatgggagcgggagcagc
gaagtacatatcaccaaaccgtag
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integrated database retrieval system
