Arvicola amphibius (Eurasian water vole): 119809605
Help
Entry
119809605 CDS
T08327
Symbol
Stag1
Name
(RefSeq) cohesin subunit SA-1 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119809605 (Stag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119809605 (Stag1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119809605 (Stag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
RFX5_DNA_bdg
Cnd3
Motif
Other DBs
NCBI-GeneID:
119809605
NCBI-ProteinID:
XP_038178453
LinkDB
All DBs
Position
3:166872129..167196838
Genome browser
AA seq
1258 aa
AA seq
DB search
MITSELPVLQDATNETTAHSDAGSELEETEIKGKRKRGRPGRPPSTNKKPRKSPGEKSRI
EAGVRGIGRGRANGHPQQNGEGDPVTLFEVVKLGKSAMQSVVDDWIESYKQDRDIALLDL
INFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFRSNFCE
FIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNL
SIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRY
RDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTN
RELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLV
YSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEH
AAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEAH
PPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFD
LEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQ
LIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLL
KTGIEHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKEDLLVLRKTVKSFLAVCQQCL
SNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDHVFID
QDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYYNDY
GDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFA
LTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFLEVLSEFSSKLLRQDKK
TVHSYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNSGSSSSKTSSVRSKKG
RPPLHRKRVEDESMDHAWLNRTDAMIQTPGALPTPQLTSTVLRENSRPMGEQIQEPESEH
GSEPDFLHNPQMQISWLGQPKLEDLNRKDRTGMSYVKVRAGVRHAVRGLMEEDAEPIFED
VMMSSRSQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPMF
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgataacttcagagttaccagtgttgcaggatgcaactaatgaaactactgcccattct
gatgctggcagcgaacttgaagaaacagagatcaaaggaaaacgaaaaaggggtcgtcct
ggccggcctccatctacaaataagaaacctcgaaaatccccaggagaaaagagcagaatt
gaagctggggttagaggaataggtcgtggaagagctaatggccaccctcaacagaatggt
gaaggagatcctgtcacattatttgaggtggtgaaactggggaaaagtgcaatgcagtcc
gtggtggatgactggattgaatcatataaacaagacagggacatcgcacttctggattta
atcaacttttttatccagtgttcaggatgtcgaggtactgtcagaatagagatgtttcga
aatatgcagaatgcagaaatcatcagaaaaatgactgaagaatttgatgaggacagtggt
gactatccccttaccatgcctggccctcaatggaaaaaattccgttccaatttttgtgaa
tttattggagtcctgattcgacaatgtcagtatagcataatttatgatgaatatatgatg
gacaccgtaatctcccttttgactggtttatcagattcccaggtcagagcttttaggcat
acaagtactcttgctgccatgaagctgatgactgctctggtgaatgttgccttaaacctc
agtattcatcaggataatacacagaggcagtatgaagctgaaagaaataaaatgattggg
aagagagccaatgaaaggctggagttactacttcagaaacgtaaagagcttcaagaaaac
caagatgaaattgaaaatatgatgaactctatttttaagggtatatttgttcatagatac
cgtgatgcaattgctgagattcgagccatttgtatcgaagaaattggagtatggatgaaa
atgtatagtgatgccttcctaaatgacagttacctgaaatatgtaggatggactcttcat
gataggcaaggggaagtcagactgaagtgtttgaaagctctacaaagcctgtataccaat
agagaattattccccaaattggagctatttacgaatcgattcaaggatcgcattgtatca
atgactcttgataaagaatatgatgttgctgtggaagcaatccgattggttactctgata
cttcatggaagtgaagaagctctttccaatgaagactgtgaaaatgtgtaccatttggtg
tattcagctcatcgccctgttgctgtggcagctggagagtttcttcacaaaaagctattt
agcagacacgatccacaagcagaagaagcattggcaaagaggagaggaaggaacagtcca
aatggaaacctcattaggatgcttgttcttttctttcttgaaagtgagttacatgaacat
gcagcctacttggtggacagtttgtgggagagctctcaagaactgttgaaagactgggaa
tgtatgacagagttgctcttagaagaacctgttcaaggagaggaagcaatgtctgaccgt
caagagagtgctcttatagagctaatggtttgtacaattcgccaagctgctgaggcacat
cctccagtgggaaggggcaccggcaagcgagtgctaacagccaaagaaaggaaaactcaa
attgatgatagaaacaaattaactgagcattttatcattacacttcctatgttactatca
aagtattctgcagatgcagagaaggtagcaaacttgctacaaattccgcagtattttgat
ctagaaatctacagcacgggtaggatggaaaagcacctggatgctttattaaaacagatt
aagtttgttgtagagaaacatgtagaatcagatgttctagaagcctgcagtaaaacctac
agcattttatgcagtgaagagtataccatccagaatagagttgatatcgctcggagccaa
ctgattgatgaatttgtagatcgattcaaccattctgtggaagatctgttgcaagagggt
gaagaagctgatgatgatgatatctacaacgttctttctaccttaaagcgtttaacttct
tttcacaatgctcatgatctcactaaatgggatttatttggcaattgctatagactatta
aagactggaattgaacatggagccatgccagaacagatagtcgtacaagcactgcagtgt
tcccattactcgattctttggcagctggtgaaaattactgacggttccccttccaaagaa
gatttgttggtattgaggaaaacagtgaaatcttttttggctgtttgccagcagtgccta
tctaatgttaatactcctgttaaggaacaggctttcatgctgctctgtgatcttttaatg
atttttagccaccagttaatgacaggtggcagagagggccttcaacctttggtgtttaat
ccagatactggactccaatctgaactcctcagttttgtgatggatcacgttttcattgat
caagatgaggaaaaccaaagcatggagggtgatgaagaagatgaagctaataaaattgaa
gccttacataaaagaaggaacctacttgctgccttcagcaaacttatcatttatgatatt
gttgacatgcatgcagctgcagacatctttaaacactacatgaagtattacaatgactat
ggtgatatcattaaggaaaccctgagtaagaccaggcagattgataaaattcagtgtgct
aagaccctcattctcagtctgcaacagttattcaatgaacttgttcaagaacaaggtcct
aatctggataggacatctgcccacgttagtggtattaaagaactggcacgtcgctttgcc
cttacatttggattggaccagatcaagacccgagaagcagttgccacgcttcacaaggat
ggaatagagtttgccttcaaataccagaatcagaaaggacaagaatatccacctcctaat
ctggcttttcttgaagtactaagtgaattttcttctaaacttcttcgacaggacaagaag
actgttcattcgtatctagagaaattcctcactgagcagatgatggaaaggagggaggat
gtatggcttccactcatttcctatagaaattcattagtcactgggggtgaagatgataga
atgtctgtgaacagtggaagtagcagcagtaaaacgtcctcagtaagaagtaaaaaagga
agacccccactgcacagaaagcgagtagaagatgaaagcatggatcacgcgtggctaaac
aggactgacgccatgattcagacccctggagccctgccaaccccacagctcacctccact
gtgcttagagagaacagccgccccatgggagaacagatccaggaacctgagtctgaacat
ggttctgagccagactttttacacaatccccagatgcagatctcatggttaggccagccg
aagttagaagacttgaatcgaaaggacagaacaggcatgagctacgtgaaagtgcgagcc
ggagtgcggcatgctgttcggggtctaatggaggaagacgctgagcccatctttgaagat
gtgatgatgtcatcacggagtcagttagaagacatgaatgaagaatttgaagacaccatg
gttattgatttgcccccatcaagaaatcggcgagaaagagctgagctgaggccagacttc
tttgattctgcagctatcatagaagatgattcaggatttggaatgcctatgttctga
DBGET
integrated database retrieval system
