Arvicola amphibius (Eurasian water vole): 119809652
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Entry
119809652 CDS
T08327
Symbol
Ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03420
Nucleotide excision repair
aamp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119809652 (Ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
119809652 (Ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119809652 (Ercc8)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119809652 (Ercc8)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119809652 (Ercc8)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
119809652 (Ercc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD_LRWD1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Beta-prop_HPS5
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
119809652
NCBI-ProteinID:
XP_038178549
LinkDB
All DBs
Position
3:complement(40177788..40214834)
Genome browser
AA seq
397 aa
AA seq
DB search
MLSFLSARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENASRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQVADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLLTLDQHNGKKSQAVESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNDSRKGLKFTVS
WGCSSEFVFVPYGSTIAVYAVHSGERLTVLKGHYKSVDCCVFQPHFQELYSGSRDCNILA
WVPSLYEPIPDDDDEATTKSQLNPAFVDAWSSSDEEG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttgagctttctgtccgctcgacagtcgggtttggaggaccctcttcgtttgcggaga
gcgcagtccacacggagggtcctgggactggagttaaacaaagacagagatgttgaaaga
atccattgcagtggcgtgaacactcttgacattgagcctgttgaaggaagatacatgtta
tcgggtggttcagatggtgtgattgtactctatgaccttgagaacgccagcagacaaccc
tattacacatgtaaagcagtgtgttccgttggcagaagccatcctgatgttcacaaatac
agcgtggagactgttcagtggtaccctcatgacacgggcatgttcacttccagctcattc
gataaaactctgaaagtgtgggatacaaatacattgcaggttgcagatgtgtttaacttt
gaggaaacggtttatagccatcacatgtctccagcagccaccaagcactgtctggtagca
gttggtactagaggacccaaggtacaactttgtgatttaaagtctggatcctgttctcac
attctacaaggtcacagacaagaaatattggcagtttcctggtcaccacgctatgactat
atcttggcaacagccagtgctgacagtagagtgaaattatgggatgtgagaagagcatca
ggatgtttgctcactcttgatcagcataatgggaagaagtcacaagctgttgaatcagca
aacactgctcacaatgggaaagttaatggcttatgttttacaagtgatggacttcacctg
ctcactgttggcacagacaaccgaatgaggctctggaatagctccaatggggagaacaca
ctggtaaactatgggaaggtctgtaacgacagcaggaaaggactgaagttcactgtctcc
tggggctgcagctcagagtttgtttttgttccatatggcagcaccattgctgtctatgca
gttcactcgggagagcggctgactgtgcttaagggacattataaaagtgtcgactgctgt
gtgttccagcctcatttccaggaactgtacagtggtagcagggattgcaatattcttgct
tgggtaccatctttatatgaaccaatacctgatgacgatgatgaagctacgactaaatcc
cagttgaatccagcgtttgtggatgcgtggagcagcagtgacgaagaagggtga
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