Arvicola amphibius (Eurasian water vole): 119809703
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Entry
119809703 CDS
T08327
Symbol
Col6a5
Name
(RefSeq) collagen alpha-5(VI) chain
KO
K06238
collagen type VI alpha
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04151
PI3K-Akt signaling pathway
aamp04510
Focal adhesion
aamp04512
ECM-receptor interaction
aamp04518
Integrin signaling
aamp04820
Cytoskeleton in muscle cells
aamp04974
Protein digestion and absorption
aamp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119809703 (Col6a5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119809703 (Col6a5)
04518 Integrin signaling
119809703 (Col6a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119809703 (Col6a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119809703 (Col6a5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119809703 (Col6a5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
119809703 (Col6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119809703 (Col6a5)
00536 Glycosaminoglycan binding proteins [BR:
aamp00536
]
119809703 (Col6a5)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119809703 (Col6a5)
Glycosaminoglycan binding proteins [BR:
aamp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119809703 (Col6a5)
Hyaluronan
Extracellular matrix or blood plasma proteins
119809703 (Col6a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
VWA_CoxE
vWA_SIBA-E
Copine
Motif
Other DBs
NCBI-GeneID:
119809703
NCBI-ProteinID:
XP_038178664
LinkDB
All DBs
Position
3:complement(172106272..172204703)
Genome browser
AA seq
2624 aa
AA seq
DB search
MKLQLIVFVLILWTETLAYQSPGPGPEYADVVFLVDSSDDLGSKSFPFVRTFLSKLISSL
PIEADKYRVALAQYSDALHNEFQLGSFKNRNPMLNHLKKNFQFIGGSLKIGNALQEAHRT
YFSAPTNGRDKKLFPPILVVLASSESEDDVEEASEALREDGVKIISVGVQKASEENLKAM
ATSQFHFNLRTVRDLSAFAANMTQIIKDVTKYREGTAVALITPPAPITPATLSTAATDAG
KTVPVPISCQRDSLADIIFLVDESVGTTQNLRDLQSFLENVTSSVDVKDKCMRLGLMSYS
DRVQTIASLKSSANQSEFQQQIQKLSLRAGGSNVGAAIEKMRREGFSESGGSRKAQGVPQ
IAVLVTHRPSDDAVREAALDLRLDGVTMFALGIQGANSTQLEDIVSYPSKQSISTHRSYS
NLESYSGNFLKKIHNEIWTQVSTYAEQIELDKTGCVDTKEADIYFLIDGSSSILKKQFEQ
IQIFMSSVIDMFPIGPNKVRVGVVQYSHKNEEEFPISLYMDAIALKKAIFNIKQLKGRTF
TGKALDFILPIIKKGKSERADEIPCYLIVLTDGKSEDGVLEPADRLRAEHVTIHAVGIGE
ANKTQLQQIAGNDERVNFGQNFDSLKNIKNEIVHRICSEKGCEDMKSDIMFLVDSSGSIG
DVNFETMKTFMKNLVGKIQIGANKTQVGVVQFSDYNKEEFQLNTFFTHKEIYTAIDRMSP
INRNTLTGSALTFVNEYFDLPKGGRPGVRKFLILLTDGQAQDEVGGPAMALRNKSVTIFS
VGVYGANRAQLEEISGDGSLVFHVENFDHLKAIESKLIFRVCALHDCKRIELLDIVFVLD
HSGSINSQQQESMINLTIHLVKKADVGRDRVQFGALRYSNDPEILFYLNTYSSKSDIIEH
LRRRRDTGGGTYTAKALQHANILFTEEHGSRLKQNVRQLMIVITDGESHDRNKLNATAWG
LRDKGITIFAVGVGDANQDELQAMAGKKENTIHVDSFDKLRDIYMPLQETLCNSSQETCN
LQEADVIFLCDGSDMVSDSEFVTMTTFLSDLIDNFDIQSQRMKIGMAQYGSRYQEIIELE
SSLNKTQWKSRIQAVAKSQGFPRIDFALKHVSDMFHPSVGGRRNAGVPQTLVVITSGSPR
YDVADAVKALKDLGICVLALGIGDVYKEQLLPITGNSEKIITFQDFNKLKNVDVKKRMVR
EICRSCGKSNCFVDVVIGFDLSSHLQGQPLFQGHPRLESYLPNILADITSIRGVSCGAGA
EAQVSLAFTVNSNQEFPAKFQIYQKAVFDNLLQVTVRGPTHLNAQFLQSLWDVFEEKSAS
RGQVMLIFSDGLQGESISMLEQQSDRLREAGLDALLVVSLDALAQDEFSSFEFGKGFDYR
THLTIGMTDLGKTLSQYLGNIAERACCCTFCKCPGIPGLQGTRGLQASKGSSGLKGSRGH
RGEDGDPGRRGEIGPQGDRGIIGCQGTRGQKGVKGFSGAQGEHGEDGLDGLDGEDGFYGL
RGGKGEKGDAGSQGSPGSRGAPGEDGAKGFPGDPGNPGRDSTIKGQKGAKGDRGSQGRTG
PKGTQGSPSSGGSRGMEGRRGPQGPSGEAGDLGPQGTQGPEGLQGPQGSSGNRGEKGEKG
SQGYQGPQGSPGPAGPRGSIGRPGFWGRKGELGVPGGPGPAGPPGQRGEQGDHGIPGYGQ
TGQKGVKGPTGFPGDPGQKGDSGDPGSPGGPGPKGFKGLTLSQGLKGETGRPGSQGPPGP
RGPKGTAGQPTYSHCDLIQFLRSHSPCWKEKCPVYPTELVFALDQSSGITERRFNETRDI
ITSIVSDLNIRENNCPIGARVVVVSYDSDTSYLIRGSDYQSKKHLLQLLSQIKYQVPQKA
RDIGNAMRFVARNAFKRTSSGSNVRRVAVFFSNGQAASRESILTATMEFSALDISLAVFA
YNERVFLDEAFGFDDTGTFQVIPVPPAGNYEPLERLRRCTLCYDKCFPNTCAEDTFFPEN
SYMDVALLLDNSRHIANDDFQAMKTLVSSVIDNFHITSNPSASDRIALLSYSPSENSRKK
SKVKTEFEFTTYDNQAIMKNYVHTSIQQLNGDVTVGLGLQWAMENLFPGTPNPRKHKVII
VISAGENHEEEEFMRMVSLRAKCQGYVIFVVSLGSTPRDELEQLASYPRDHHLIQLGRMH
KPDLNYIVRFLKPFVYSVRRRFNQYPPPMLEGDCRRLNIERGDALHGSLRLAANLHEVSA
SKSSLLGQELSTGKDSSFMLEDHGGDHLVYMANQMLKPETLVSHYENDQGSAAMASLTSE
HENHGREELGLADEPGEASLQDYYMDVAFLIDASQRVGNDVFQEVKTLTTSVLDYFHIAP
DPLTSVLGDRVAVLTYSPPGYLPNTGECPVYMEFDLVTYNRVHQMKHHLQESLKQLNGDV
FLGHALQWTIDNVFVGTPNLRKNKVIFIISAGETSPLDKEVLQKASLRAKCQGYTIFVFS
FGPVHNDMELEGLASHPLDHHLVQLGRIHKPDMDYIIKFVKPFVHSIRRAINKYPTRDLQ
AKCANITFPSPENVGAEDSFFLFPEVYKIETRDSEQVGDSSSQEQHFFVLGDNHGNHSGT
TADLIHKLYLLFSSEEVMVNDKEEAHWEETAAPVNDKQDGEDAR
NT seq
7875 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccaactaattgtattcgtcctaatcctctggactgaaacgctggcatatcag
agtccaggaccgggccccgagtatgcagatgtggtgtttctggtggacagctctgatgac
ctggggagtaagtccttcccatttgtgagaactttcctcagcaagctgatcagcagcctc
cccatagaggccgacaagtaccgtgtggccctggcccagtacagcgatgctctccacaac
gagttccagctgggctccttcaagaacaggaaccccatgctgaaccacctgaagaagaac
ttccagttcatcggtgggtccctgaagatagggaacgccctgcaagaggctcacaggacc
tatttctctgcccccacaaatggaagagacaagaaactgttccccccgatcctggtggtg
ctggcttcatccgagtctgaggatgatgtggaagaggcttcggaggccctgagggaagat
ggggtgaagatcatctcggtgggggtgcagaaggcttctgaggaaaacctgaaggctatg
gccacatcccagttccatttcaacctcaggacggtcagagacctcagtgcgtttgccgca
aacatgacacagatcatcaaggacgtaactaagtacagggaaggaacggctgtggccctg
atcacgccgccagccccaattacacctgcaaccctaagcacagcagcaactgatgctgga
aagacagttcctgttcccatatcctgccagagagactccctggctgacatcatattcttg
gtggacgagtcagtggggaccacacagaatctgagggaccttcagagcttcctggagaat
gtcaccagctctgtggacgtgaaggacaagtgcatgaggcttgggctgatgagctatagc
gacagggttcagactattgcgtccctgaagtcaagtgccaaccagtctgaattccagcag
caaattcagaaactctccctccgggctggggggtcgaatgtgggggccgccatcgagaag
atgaggagagaaggtttctcagagtccggtggcagcaggaaggcacagggcgtccctcag
attgctgtgctggtcacccacaggccatcggatgatgcagtgcgcgaggctgcactggac
cttcgcttggatggcgtaactatgtttgctctgggcatccaaggggccaacagcacgcag
ttggaagacatagtgtcctacccttccaagcagagcatttccacacacagatcctacagt
aacttggaatcatacagtgggaacttcctgaagaagatccacaatgaaatctggacccaa
gtttctacctatgctgaacaaatagaactcgataaaactggctgtgtggatacaaaggaa
gcagatatctacttcctcattgacggctcgtccagcatccttaagaaacagtttgagcaa
atccagatatttatgtcctctgtgatagacatgtttcccattggtcccaacaaagtccga
gtaggagtcgtgcagtattcacataagaatgaagaggaatttcccatctctctctacatg
gatgccatagccttgaagaaggctatttttaacatcaagcaactcaagggtcgcacattc
actgggaaagccttggatttcatactgccaataataaagaagggaaaatcagagcgggca
gatgaaatcccctgttacctcatcgtactgactgatgggaagtcagaagacggtgttcta
gaacccgccgacagactcagggctgaacatgtcaccattcatgcagttgggattggtgag
gcgaataagacccaacttcaacaaattgccgggaacgatgaaagggtcaactttgggcag
aattttgattccctaaagaacataaaaaatgaaattgtccaccgcatctgctctgaaaaa
ggatgtgaagacatgaagtctgatatcatgtttttggtggacagttctggaagcataggg
gatgtaaattttgagacaatgaaaacctttatgaaaaacctggtggggaagatccagatt
ggtgccaacaaaacgcaagttggcgttgttcagttcagcgattacaataaggaagaattc
cagctgaatacattcttcacacacaaagaaatttatactgccatagacaggatgtcgcct
atcaacagaaacacgttgacgggaagcgcactcacctttgtgaatgaatactttgacctt
cccaaggggggccgtcccggggtcagaaagtttctcatcctcctcacagatggacaagcc
caagatgaagtagggggtcctgcgatggctctcaggaacaaaagtgtgaccatcttttct
gtgggtgtgtatggtgccaatagggctcagctggaggaaatcagtggggatggcagcctg
gtctttcatgttgagaactttgaccatctgaaggcgatagagagtaaactcatcttccgc
gtgtgtgctctgcatgattgcaagaggattgaactcttagacatcgtgtttgtcctggac
cattcaggcagcataaattcacaacaacaagaaagcatgattaacctcaccatccacttg
gtgaagaaggcagatgttggcagggaccgagtccagtttggagctctcagatactccaac
gatcctgagattcttttctatcttaacacatactcaagcaaatcagacatcattgagcac
ctgagacgacgcagggacaccggagggggaacctacactgccaaggctctccagcatgca
aacatcctgttcacagaagagcatggcagccgcctgaagcagaacgtgaggcagctgatg
attgtcatcacggatggcgagtcccatgaccgaaataaactcaatgccacagcatgggga
ctaagggacaaaggcatcaccatctttgcagttggtgtaggagatgccaaccaagatgaa
ctgcaggccatggcagggaagaaggaaaacactatccatgtagacagtttcgacaaactg
agagacatttacatgcctctgcaagaaactctgtgcaacagttcacaagagacctgtaac
cttcaggaagctgatgtgatcttcctttgtgatggctctgacatggtgtctgattcagag
tttgttaccatgacaactttcttgtcagacttaattgataattttgacattcagtctcaa
agaatgaaaatcgggatggctcaatacgggagccggtatcaggaaatcattgagttggag
agctccctgaacaagactcagtggaagtctaggatccaagctgtggccaagagccagggc
tttccacgaattgactttgctcttaagcatgtgagcgacatgtttcatccctctgtcggt
gggaggagaaatgctggtgttcctcagactttggttgtcatcacgtctggctctccccgc
tatgatgtggcagatgcagtaaaagccctgaaagacctcggcatctgtgtcctggctctg
ggcattggagatgtttataaggaacaacttctgcccatcacaggcaactcagaaaaaata
attactttccaagactttaataaattgaagaatgtggatgtgaagaaaagaatggtccgc
gaaatctgccggagctgcgggaaatccaattgctttgtggatgtagtgattgggttcgac
ctttccagtcacctccagggccagcctttgttccagggtcatccccgcttagaatcatac
ctcccaaacatcttagcggacatcacctccatcagaggggtgagctgtggagcaggcgca
gaggcacaggtgagcctggcctttacggtgaacagtaaccaagagttcccagccaagttc
caaatctaccagaaagcagtgtttgacaacttgctgcaagtcaccgtccgtggcccaact
catctgaacgcccagttcttgcagtcactctgggatgtgtttgaggagaaatctgcctcc
aggggccaggtgatgcttatcttctcagatggtctccagggcgaaagcatcagcatgctg
gagcagcagtcggacaggctcagagaagcaggactggatgctttgttggtggtgtccctt
gatgcattggctcaggatgagttttccagctttgaatttggaaaaggatttgactatagg
actcacctgaccattggaatgacagacctgggcaagacactttcccagtatctgggaaac
attgcagagagggcttgttgctgtacgttttgtaaatgtccagggattccaggacttcaa
gggacccggggacttcaagcctccaagggttcttcaggcctgaaaggcagccgaggacac
aggggagaggacggagaccctggaagacgaggagaaattggacctcaaggagacagaggg
atcataggatgtcaggggactcgaggccaaaagggcgtcaaaggattttctggagcccag
ggagaacacggagaagatgggcttgatggactagatggagaagatggattttatggactt
cgtgggggaaagggggaaaaaggtgacgctggctctcagggcagcccaggttccagaggt
gcccctggagaagatggagcgaagggcttcccaggggatcccggtaacccaggacgagac
agcaccatcaaaggccagaagggtgccaaaggagaccgaggaagccaagggagaactggg
ccgaaggggacacaaggcagtcctagctccggaggaagcaggggaatggaaggccggagg
ggaccccagggtccctcgggggaagcaggagacctggggcctcaaggtacacagggacca
gaaggactacaaggcccacaggggtccagtggaaaccgaggcgagaaaggagaaaaagga
agccaagggtaccagggacctcagggttctcctgggccagcaggacctagagggagcatt
ggaagacctggattttgggggagaaagggggagctcggagttcctggaggccccggacca
gctgggccccctggacagcgaggagaacagggagatcatggcatcccaggctatggccag
acaggacaaaaaggagttaagggcccaacaggattccctggggatccagggcagaagggt
gactctggagatcctggaagtcctgggggacctggacccaaaggattcaagggactgact
ctctctcaaggcttgaaaggtgagactggaagaccagggtctcaaggccctcctggacca
agaggtcctaaaggcacagcagggcagcctacgtattctcactgtgatctgatccagttc
ctgcggagccacagtccctgttggaaagaaaagtgtcccgtgtatccaacagagctggta
tttgctctggaccagtcctctggaattacagaaagaagatttaatgaaacaagagacatc
attacgtccattgtcagtgacctcaacatcagggaaaataactgtcctatcggagcccgg
gttgttgtggtttcctatgactcagacaccagctacctcatccgtgggtctgactaccag
agcaagaaacatctccttcagcttctttcccaaataaaataccaagtcccccagaaagcc
agggacattggcaacgcgatgaggtttgtggcccgcaatgctttcaagcggacatcttca
ggatccaacgtcaggagagttgcagtgttcttcagcaatggccaggcagccagtagagag
tccattctcacggccaccatggagttcagtgccctggatatcagccttgccgtcttcgct
tataatgaaagagttttccttgatgaggcctttgggtttgatgacactgggacatttcag
gtgattccagttcctccagctgggaattatgagcccctggaaaggcttcggcgctgcaca
ctttgctacgacaagtgttttccaaatacttgtgcagaagacactttctttcctgaaaat
tcatacatggatgtagcgttgctcttagacaattcccgtcatatagccaatgatgacttc
caagccatgaagacattggtgagctcagtgattgacaacttccacatcacttcaaaccct
tcagcctcggacaggattgctttgctgagctattctccctcagagaattccagaaagaaa
agcaaggtgaagacagagtttgagtttacaacctacgacaaccaagccatcatgaagaac
tacgtccacacttccatccaacaactaaatggagatgtgactgttggtcttggcctacag
tgggccatggagaatctcttcccaggaacccccaatccaagaaaacacaaggtcatcatt
gtgatttcagctggagagaatcatgaggaggaggaatttatgaggatggtatctttgagg
gccaaatgtcaaggctatgtcatatttgtggtttctctgggctccacaccaagagatgag
ttggaacagttagctagctacccacgcgatcaccatctgatacaactcgggaggatgcac
aagccagatctgaattatattgtgaggtttctaaagccatttgtatactctgtcagacgt
cgcttcaatcagtacccaccgccgatgctggagggcgattgcaggcgcctcaatatagag
aggggagatgccctacacggcagcctccgattggctgctaatctgcatgaggtttccgca
agcaagagcagccttcttggtcaagagctgagcactgggaaagactcgtcttttatgttg
gaggatcatggaggcgaccatttggtttacatggcaaaccaaatgctgaagccagaaact
ctagtgagtcactatgaaaatgatcagggatctgcagcaatggcaagtctcacgtctgaa
catgaaaatcatggccgagaagaactgggtcttgctgatgagcctggggaagcttctctt
caagattattatatggatgtggccttcctcatagatgcttctcaaagagtaggaaatgat
gtgtttcaggaagtgaaaactcttacaacttcggtactggattactttcacatcgcccca
gatccgctgacctctgtcttaggagacagagtggctgtcctgacctactctcctccaggc
tatctgccaaacactggagagtgcccagtctacatggaatttgatttggtcacttacaac
agggtacaccaaatgaaacatcatctccaagagtctcttaagcagctcaatggagatgtt
ttccttggtcacgctcttcagtggacaattgacaatgtctttgtaggaacccccaatctg
aggaaaaacaaagttatctttataatatctgctggtgaaaccagtcctctagacaaagaa
gtcttacagaaggcatctctgagagccaagtgccaaggctacaccatatttgtattttcc
tttggtcctgtacacaatgacatggagttagaaggattagcgagccaccccctggatcat
cacttagtccagcttggtcggatacacaagccagatatggactatatcataaagttcgtc
aagccatttgtccattcaatcagacgtgctatcaacaaataccccaccagagatctgcaa
gccaagtgtgcgaacatcaccttccccagtccagagaatgttggcgcagaagacagtttc
tttctcttcccagaggtgtacaaaattgaaacaagagacagcgagcaggttggagactcc
agttcccaggagcaacatttctttgtactaggggacaatcatggtaaccattcggggacc
actgctgatttgatccacaagttgtacttgctcttctcctctgaagaagtgatggtgaat
gacaaggaggaggcacactgggaagaaactgcagctcccgtgaacgacaagcaagatggc
gaggatgcaagataa
DBGET
integrated database retrieval system
