Arvicola amphibius (Eurasian water vole): 119809707
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Entry
119809707 CDS
T08327
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119809707 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119809707 (Myo5c)
04131 Membrane trafficking [BR:
aamp04131
]
119809707 (Myo5c)
03029 Mitochondrial biogenesis [BR:
aamp03029
]
119809707 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119809707 (Myo5c)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119809707 (Myo5c)
mRNA cycle factors
P-body specific factors
119809707 (Myo5c)
Membrane trafficking [BR:
aamp04131
]
Others
Actin-binding proteins
Myosins
119809707 (Myo5c)
Mitochondrial biogenesis [BR:
aamp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119809707 (Myo5c)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119809707 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
119809707
NCBI-ProteinID:
XP_038178672
LinkDB
All DBs
Position
3:143723226..143799978
Genome browser
AA seq
1736 aa
AA seq
DB search
MAVAELYAQYNRVWVPDPEEVWKSAEIAKDYRAGDRVLRLLLEDGTELDYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQAENERNYHIFYQLCACAQQPEFEHLKLRSAEEFNYTRMGGNTVIEGVNDR
ADMVETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQVTTVSNERSSVSEDDSHLKVFCE
LLGLETGKVAQWLCNRKIVTASETVVKPMTRPQAINARDALAKKIYAHLFDFIVERINHA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNPLFEKPR
MSNTSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEILRASKFHLCATFFQETPVASSPF
GAMITVKSAKQVVKPNSKHFRTTVGSKFRSSLSLLMETLNATTPHYVRCIKPNDGKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYGILMTQQELSRGDKKEVCKIA
LHRFIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQSCIVIQKHVRGWLQRRKFLRER
QAALTIQQYFRGQQTVRKAITATALKEAWAAIILQKHCRGYLVRNLYQLIRVATITIQAY
TRGFLARRQYRKLLQEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQRLQKKLED
QSRENHGLVEKLTSLAALRAGDLEKIQKLEAELERAATHRHSYEEKGRRYRDTVEERLSK
LQKHNAELELQKEQAELTLQEKTEELKEQMDKLTRQLFDDVQKEEQQRLLLEKSFELKTQ
AYEKQIASLREEIKALKDERTQLHHQLEEGRVTSDSLKGEVARLTEQAKTISEFEKEIEL
LQAQKIDVEKHVQSQKREMRERMSEVTKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREETGINESIRHE
VTRLTSENMMIPDFKQQISELERQKQDLESRLKEQTEKMEGKPEESLSHLSRARDEEGVW
GKAVEVKGNEGPIDKIQELQETSEFLEKQPEAEEEAKRVLQQEASQLSLENRDLEEELDM
KDRVIKKLQDQVKTLTKTIEKANEVHLPSGPKEYLGMLEYKKEDEAKIIQNLILDLKPRG
VVVNMIPGLPAHILFMCVRYADSLNDADMLKSLMNSAINGIKHVVKEHLEDLEMLSFWLS
NTCHFLNCLKQYSGEEEFMKYNSPQQNKNCLNNFDLAEYRQILSDVAIRIYYQFIIVMEN
NIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYTTMCQNG
LDPELVRQVVKQLFYLIGAVTLNSLLLRKDMCSCRKGMQIRCNISYLEEWLKDKNLQNSS
AKETLEPLSQAAWLLQVKKTTDSDAKEISECCTCLSAVQIIKILNSYTPIDDFEKRVAPS
FVRKVQALLNNRGDSSQLMLDTKYLFQVTFPFTASPHALEMTQIPSSFKLGFLRRL
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgagctctacgcgcagtacaacagggtttgggtccctgatcctgaagaa
gtgtggaagtcggctgaaattgcaaaggactacagagctggtgaccgagtcctccgactc
ctgctagaagatggaacggagctggattaccctgttgacccggggtcactgcctccactt
aggaacccagacatccttgtgggtgagaatgacctcacagccctcagctacctccacgag
ccggcagtgctgcataacctcagaatccgctttgcagaatccaagctcatctacacctac
agcggaatcatcttggtggccatgaatccttacaagcagctgccaatctatggggatgcc
atcatccatgcctacagtggacagaacatgggtgacatggacccacacatctttgctgtc
gcagaggaggcctacaagcagatggccaggaacaacagaaaccaatccataatcgtgagt
ggtgagtcgggagctgggaagactgtgtctgcccgctatgccatgaggtactttgccact
gtcagtaaatccagcagcaacgcccacgtggaggacaaagtcctggcatccaaccccatt
actgaggcggtcggcaatgccaagactacccgcaatgacaacagcagtcggttcgggaaa
tacacagaaatcagctttgatgagagaaatcagatcattggtgccaatatgagaacgtac
ctcctggagaagtccagagttgtctttcaggcagaaaatgagcggaattaccacatcttc
tatcagctctgcgcatgtgcgcagcagccggagtttgagcatcttaagctaaggagcgct
gaagagttcaactacacaagaatgggagggaacactgtcattgaaggcgtgaatgacaga
gcagacatggtggagactcagaagaccttcacactactgggtttcaaggaagattttcag
atggatgtgttcaagattcttgctgccatcctacatctgggtaatgtgcaggtcaccacc
gtgagcaacgagaggtcttcagtcagtgaggatgacagtcacctgaaggtgttctgtgag
ctcttgggcctggagactggcaaagtggctcagtggctatgcaataggaaaatcgtgact
gcctcggagacggtggtaaagcccatgaccaggcctcaggccatcaatgccagggacgca
ctggccaaaaagatctacgctcacctgttcgacttcatcgtagagagaatcaaccatgcc
ctgcacttctcaggcaagcagcacacttttattggtgttttggacatttatggttttgag
acctttgatgtcaacagctttgaacagttctgcatcaattacgctaatgaaaagctgcag
cagcagtttaacctgcatgtctttaaacttgagcaagaagaatacatgaaggaagacatc
ccttggactctgatagacttctatgacaatcaacctgttattgacctcattgaagcaaaa
atgggcattttggagttactggatgaagaatgcttgttgcctcacggaactgatgaaaac
tggcttcaaaagctgtacaacaattttgtcaacaagaaccctttattcgaaaagcctaga
atgtcaaacacatctttcatcatccagcacttcgctgacaaggtggagtaccagtgtgaa
ggcttcctggagaagaaccgagacactgtctatgacatgctggttgaaatcctcagagca
agcaagtttcatctctgcgccacctttttccaagaaacccctgttgcatcttctcccttt
ggggcaatgatcacagttaaatctgcaaagcaggtcgtcaagccaaacagcaagcacttc
cggaccacagtggggagcaagttccgcagctctctgtccttgctcatggagaccctcaat
gccaccacaccccactatgtccggtgcatcaagccaaatgatggcaagttgccctttgag
tttgactccaaacgaatcgtccagcagctgcgagcctgtggcgttttagaaacaattcgc
atcagtgcccagagctacccttccaggtggacatacctcgagttctacagccgctacggc
atccttatgacccagcaggagctttcccgcggtgataagaaggaggtgtgcaagatagct
ctgcacaggttcatccaggattctaaccagtaccagtttggtagaaccaaaatttttttc
agagcgggacaagtggcttatttagagaaactccgcttggataaactgaggcagagttgt
attgtgattcaaaagcatgtgcggggctggctgcagaggaggaagttcctccgagagaga
caagctgccctgacaatccagcagtatttccggggtcagcaaacagtgaggaaggccatc
actgccacggctttgaaagaggcctgggcagccatcatcctccagaagcattgccgaggg
tacctggtccgcaacctgtaccagctgatccgcgtggccaccatcaccatccaggcctac
acacgcggcttcctggccaggaggcagtaccggaagttgctgcaggagcacaaggctgtg
atccttcagaagtacgcgcgggcatggctggcccggcgtagattccagagcatccgcagg
ttcgtgctcaacattcaactgacttacagggtccagcgtttgcaaaagaagctggaggat
cagagcagagagaaccatggactggtggagaaactgaccagcctggctgctctgcgggct
ggtgacctggaaaagattcagaagctggaagcagagctggaacgagcggccacccaccga
cacagctatgaagagaagggcaggagatacagggacaccgtggaagagaggttgtcgaag
ctgcagaagcacaatgcagaactggagttacagaaagagcaagcagagctgactctacaa
gagaagaccgaggagctgaaagaacagatggacaagctcaccaggcagctgtttgatgac
gtgcaaaaagaggaacagcaaagactacttcttgaaaaaagttttgagctgaaaacgcaa
gcctatgagaaacagatagcatctctgagagaagaaattaaagccctcaaggacgagagg
acacagctccatcatcagctggaggagggccgggtcacctctgacagcctgaaaggggag
gtggctcgtctgaccgagcaagcaaagaccatctctgagtttgagaaggagatagagctg
ctgcaggcacagaagatagatgtggaaaaacacgtgcagtcacagaaacgggagatgaga
gaacggatgtcagaggtcaccaaacagcttctggagagctacgacatagaagatgttaga
agcaggctctctgtggaggatctggagcacttaaatgaggatggagaactttggtttgcc
tatgaaggactcaaaaaggcaactcgtgttctggaaagccatttccagtctcagaaggat
tgctacgaaaaagagattgaaggtctgaacttcaaagtagtccacctgagccaagagatc
aaccacctgcagaaactgttccgagaagagacaggcatcaatgaaagtatccgtcacgaa
gtcaccaggctgacatcagaaaacatgatgatcccagacttcaagcagcagatttcagag
ctggaaaggcagaaacaggatcttgagtcgcgcctgaaggagcagaccgagaagatggaa
ggaaaacccgaagagtcactcagtcatctaagtcgagccagagacgaggaaggagtgtgg
ggcaaggcagtggaagtcaaaggaaatgaggggcccatagataagatccaagaactgcag
gagaccagcgagttcctggagaagcaaccagaagctgaagaggaagccaagcgtgttctc
caacaggaggcctctcagctgtcattggaaaacagggatcttgaggaagagttggacatg
aaggacagagtcattaaaaagctacaggatcaagtcaagactttaaccaagacaattgaa
aaagccaatgaagtgcacctgccctcaggacccaaggagtaccttggaatgctggaatac
aagaaagaagatgaggccaagatcattcaaaatctcattcttgacctgaagccccgaggc
gtggtagtgaacatgattcccgggctgccagctcacatcctgttcatgtgtgtgcggtat
gcagactccctgaatgatgccgacatgctcaagtccctcatgaacagtgccattaacggc
atcaagcacgtggttaaggaacatctggaagatttggagatgctgtccttctggctgtcc
aacacttgtcacttcctcaactgcctgaagcagtacagtggcgaagaggaattcatgaag
tataacagcccacagcagaataagaactgcttgaacaattttgatcttgcagaatacaga
cagattctgagtgatgtggctattcggatttattatcagttcatcatcgtgatggagaac
aacatccagcccataatagtgccaggaatgctggagtatgagagcttgcagggcatttcc
ggtctgaagcccaccggtttccggaagcgctcgtccagtatcgatgacacagatgcctac
accatgacatccgtcctgcagcagctgagttacttctacaccaccatgtgtcagaatggc
ctggaccccgagcttgtgaggcaggtggtgaagcagctattctacctgatcggggcagtg
accctcaacagcctcctcctgaggaaggacatgtgctcctgcaggaaagggatgcagatc
aggtgcaacatcagctacttagaagaatggcttaaagataagaacttgcagaacagttcg
gccaaggagacgctggagcccctgtctcaggcagcctggctgctccaggtcaagaagacc
acagacagcgatgccaaggagatctccgagtgctgcacctgcctgtccgctgtgcagatc
ataaagatccttaattcatacacacctatagacgacttcgagaaaagagtcgctccgtcc
ttcgttcgcaaagtgcaggctcttctgaataaccggggtgactcatcccagttgatgctg
gacaccaagtatctttttcaagtcacgtttcctttcacggcttctccacacgccctggag
atgacccagatccccagcagcttcaagctcggctttctccggagactgtag
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integrated database retrieval system
