Arvicola amphibius (Eurasian water vole): 119809712
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Entry
119809712 CDS
T08327
Name
(RefSeq) cadherin-10 isoform X1
KO
K06802
cadherin 10, type 2, T2-cadherin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119809712
Cell adhesion molecules [BR:
aamp04515
]
Cadherins
Major cadherins
119809712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
Cadherin_4
Stevor
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
119809712
NCBI-ProteinID:
XP_038178685
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All DBs
Position
3:complement(16744382..16860153)
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AA seq
792 aa
AA seq
DB search
MTIYQFLRLFVLWACLPHFCSPELMFRRTPGLQQMIAEARVPRSDGKILHRQKRGWMWNQ
FFLLEEYTGSDYQYVGKLHSDQDKGDGSLKYILSGDGAGTLFIIDEKTGDIHATRRIDRE
EKAFYTLRAQAINRRTLRPVEPESEFVIKIHDINDNEPTFPEEIYTASVPEMSVVGTSVV
QVTATDADDPSYGNSARVIYSILQGQPYFSVEPETGIIRTALPNMNRENREQYQVVIQAK
DMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESSPVGTAVGSVKATDADMGK
NAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRRLYTLKVEAENTHVDPRFY
YLGPFKDTTIVKISIEDVDEPPVFSRSSYLFEVHEDIEVGTIIGTVMARDPDSTSSPIRF
TLDRHTDLDRIFNIHSGNGSLYTSKPLDRELSQWHNLTVIASEINNPKETTRVSVFVRIL
DVNDNAPQFAVFYDTFVCENARPGQVSNQLIQTISAVDKDDPLGGQKFFFSLAAVNPNFT
VQDNEDNTARILTRKNGFNRHEISTYLLPVVISDNDYPIQSSTGTLTIRVCACDSQGNMQ
SCSAEALLLPAGLSTGALIAILLCIIILLVIVVLFAALKRQRKTEPLILSKEDIRDNIVS
YNDEGGGEEDTQAFDIGTLRNPAAIEEKKLRRDIIPETLFIPRRTPTAPDNTDVRDFINE
RLKEHDLDPTAPPYDSLATYAYEGNDSIAESLSSLESGTTEGDQNYDYLREWGPRFNKLA
EMYGGGESDKDA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgacgatctatcagttcttgagactttttgttctctgggcatgcctaccccacttctgt
tctccagaattaatgttcagaaggactcctgggcttcagcaaatgattgcagaagcccgc
gtcccaagaagtgatggtaaaatccttcaccgccaaaaacgtggctggatgtggaaccag
ttcttcttactggaagaatatacaggatctgattatcaatatgtaggcaagcttcattca
gaccaagataaaggagatggatcgctcaaatatatcttatctggagacggagctggtact
ctttttattattgatgagaaaacaggtgatattcacgccacaaggcgaattgatagggag
gaaaaggccttctatactctacgtgctcaagctattaacagaagaactctgaggccagtc
gaaccagagtctgaatttgtgatcaaaatccacgatatcaatgacaatgagccaacattc
ccagaggaaatttatactgccagtgttcctgaaatgtctgtcgtaggtacttctgtggtg
caagtcacagctactgatgctgacgacccttcctatgggaacagcgccagagtcatatac
agcatacttcaagggcagccttatttctctgtggagccagaaacaggtatcatcaggaca
gctttaccaaatatgaaccgagagaacagggaacagtaccaggtggtcatacaggccaag
gacatgggtggccagatggggggtttatccggaaccaccacagtgaacatcacacttaca
gatgtcaatgacaacccgcctcgctttcctcagaataccatccatcttcgagttcttgaa
tcctctccagttggaacagctgttggaagcgtaaaagcaaccgatgctgacatggggaaa
aatgctgaagtagattaccgcattattgatggagatgggacagatatgtttgacattata
actgagaaggacacacaggaaggcatcattactgtgaaaaagccacttgactatgagagc
cggagactttatactctgaaggtcgaggcagaaaatacccatgtggatccacgtttttat
tatttaggaccattcaaagatacgacaattgtgaaaatttccatagaagatgtggatgag
ccccctgttttcagccgatcctcctatctgtttgaagttcatgaggacattgaagtgggc
acaatcattggcactgtcatggcaagagacccagattctacttccagtcccatcagattc
actttggatcgccatactgaccttgacagaatctttaacattcattctggaaatggatcg
ctttatacttcaaagcccctggatcgtgaactgtctcaatggcacaatcttactgttata
gcttctgagatcaataatcccaaagagacaactcgtgtgtctgtttttgtgaggattttg
gatgtgaatgacaatgctccacaatttgctgtgttttatgacacatttgtatgtgaaaat
gccagaccagggcaggtgagcaaccagctgatacagactataagtgcggttgacaaagat
gatcccttaggtggtcagaagtttttcttcagtttggctgctgttaatcctaatttcaca
gtacaggataatgaagataacactgccagaattttaaccagaaaaaacggcttcaaccga
cacgaaataagcacctatctattgcctgtggtgatatccgataatgattacccaattcag
agcagcactggcaccctgaccatccgagtgtgcgcctgcgacagccaaggcaacatgcag
tcctgcagcgcagaagccctgctcctgcctgctggactcagcacgggtgccttgatagcc
attctcctctgcatcataattctgctggttatagtagtcctctttgcagccctgaaaagg
cagcggaagaccgagcctctgatcttatccaaagaggatatcagagacaacattgtgagc
tataatgatgaaggtggtggagaggaggacacccaggcatttgatattggtaccttgagg
aatcctgcagctattgaggagaaaaagctccggcgtgatattattcctgaaacgttattt
atacctcggaggactcctacagcccccgataacacggacgtccgggatttcattaacgag
cggctcaaagagcatgatctggaccccactgcgcctccctacgactcactggctacctat
gcctatgaaggaaacgactccatcgctgaatctctgagctccttagaatcaggtaccact
gaaggagaccaaaactacgattacctccgagaatggggacctcggtttaataaactagca
gaaatgtatggtggtggcgagagcgacaaagacgcttag
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