Arvicola amphibius (Eurasian water vole): 119809744
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Entry
119809744 CDS
T08327
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119809744 (Myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119809744 (Myo5a)
04131 Membrane trafficking [BR:
aamp04131
]
119809744 (Myo5a)
03029 Mitochondrial biogenesis [BR:
aamp03029
]
119809744 (Myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119809744 (Myo5a)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119809744 (Myo5a)
mRNA cycle factors
P-body specific factors
119809744 (Myo5a)
Membrane trafficking [BR:
aamp04131
]
Others
Actin-binding proteins
Myosins
119809744 (Myo5a)
Mitochondrial biogenesis [BR:
aamp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119809744 (Myo5a)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119809744 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
DUF5382
nSTAND3
MC7
Motif
Other DBs
NCBI-GeneID:
119809744
NCBI-ProteinID:
XP_038178747
LinkDB
All DBs
Position
3:143554045..143708941
Genome browser
AA seq
1877 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYRLDPKTKELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGNADGFHYTKQGGSPMIEGVD
DAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVGFASRDSDSCTIPPKHEPLIIF
CDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFSWIVDHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVFEEQINVLKSSKFKMLPELFQDDEKAIS
PTSATSSGRTPLTRVPVKPTKGRPGQMAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKKYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRRYKIRRAA
TIVLQSYLRGYLARNRYRKILREHKAVIIQKRVRGWLARTYYKRTMQAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGVYNSE
TEKLRNDVERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTRSEKKSIEERADKYKQET
EQLVSTLKEENTLLKQEKETLNHLIVEQAKEMTETMERKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMLNVPKPGHKRTDSTHSSNESEYTFSSEFAETEDIAPRT
EEPSEKKVPLDMSLFLKLQKRVTELEQEKQIMQDELDRKEEQMFRSKAKEEERPPIRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRSST
MDYQELNEDGELWLVYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQ
LLAQNLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYRISLYKRMIDLMEQ
LEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLE
YKREDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTIN
SIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEY
RQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGT
YTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAITLNNLLLRKDMCSWSKGMQ
IRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCSALTTAQ
IVKVLNLYTPVNEFEERVSVSFIRTIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLAL
ETIQIPASLGLGFIARV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtccgagctctacaccaagtttgccagggtttggattcctgatcctgaggaa
gtgtggaagtcagcagagttgctcaaagattataagcctggagataaagtgctgctactt
caccttgaggaagggaaggatttggaataccgtctagatccaaagaccaaggagctgcct
cacttgcggaaccctgacatacttgttggggaaaatgatctcacagccctcagctatctt
catgagcctgctgtgctgcataatctccgcgttcgcttcattgattccaaacttatttat
acatattgtggaatagtcctagtagctataaatccctatgaacagctgcctatttatgga
gaagatattattaatgcatacagtggccagaacatgggtgacatggatcctcacatcttt
gcagtagctgaagaggcttataaacaaatggcaagggatgaacgaaatcaatccatcatt
gtaagcggagagtcgggtgcaggaaagactgtctcagctaagtatgccatgcgatacttt
gccactgtaagtggttctgccagtgaggccaatgttgaggaaaaggtcttggcctccaac
cccatcatggagtcaattggaaatgctaaaacgaccaggaatgataatagcagccggttt
gggaaatatattgaaattggttttgacaagagatatcgaatcatcggtgccaatatgaga
acttacctcttagagaaatccagagtggtattccaggcagaagaggagagaaactaccat
atcttctatcagctctgtgcgtcagcgaagttacctgagtttaaaatgctgcgattagga
aatgcagatggttttcattacacgaagcagggaggcagtcctatgattgaaggagtggat
gacgcgaaggagatggcgcacaccaggcaggcctgcactctgctgggaataagtgaatct
taccagatgggaatttttcgaatacttgctggcatccttcacttaggcaatgttggattt
gcatctcgagattcagacagctgcacaatacctcccaagcatgagccacttatcatcttc
tgtgacctcatgggtgtggattatgaagagatgtgtcactggctctgccaccgaaagctg
gctactgccacagagacatatatcaagcccatctccaagcttcaggccacaaatgcccga
gatgctttagcaaagcacatctatgcaaaactctttagctggattgtagatcacgtcaat
caggctctccattctgctgtcaagcagcactctttcattggcgtgctggatatttatgga
tttgaaacttttgagataaatagttttgaacagttttgcataaattatgcaaatgaaaaa
ctgcagcaacaattcaacatgcatgtcttcaagttggaacaggaggaatacatgaaggaa
caaattccatggacactcatagatttttatgataatcagccttgtatcaatcttatagaa
tctaaactgggaattctagatttgctggatgaggagtgtaagatgcctaaaggcacagat
gatacatgggcccaaaagctgtacaacacacatttgaacaaatgtgctctctttgagaag
ccccgtatgtcaaacaaagctttcatcatcaaacattttgctgacaaagtggagtaccaa
tgtgaaggctttcttgaaaagaataaagacactgtttttgaagaacaaattaatgtcctt
aagtcaagcaagtttaagatgctaccagaactatttcaagatgatgagaaggccatcagt
cctacctccgctacctcttcagggcgcactcctctcactcgagtgcctgtaaagccgacc
aagggccgacctggccagatggccaaagaacacaagaaaacagtggggcaccagtttcga
aactcccttcacctgcttatggaaaccctcaacgccacgactcctcactatgtacgctgc
attaagcctaatgatttcaagttcccattcacctttgatgagaagagggcagtgcagcaa
ctgagagcatgtggtgtcctggagactatccgaatcagtgcagcaggttttccctcacgg
tggacttatcaagagtttttcagccggtatcgggtcctaatgaagcagaaagatgtgctg
ggagatagaaagcaaacatgcaagaatgtattagagaaactgatattggacaaggacaaa
taccagtttggtaagacaaagatcttttttcgtgctggtcaagttgcctatctagaaaaa
ttgagagctgacaaactgagggctgcctgcatccggatccagaagaccatccgtgggtgg
ctgctaaggaagaaatatttgtgcatgcagagggcagccatcacagtgcagcgatacgtg
cggggctatcaggctcgatgctatgctaagttcctacgcagaaccaaggcagcaaccacc
attcaaaagtactggcgcatgtatgtggttcgcaggaggtacaagattcgacgagctgcc
actattgttcttcagtcttatttgagaggctatttggcaagaaatagatatcgcaagata
cttcgtgagcataaagcagtcatcattcagaaacgtgttcgtggctggctggctcgtaca
tattataagagaaccatgcaagccatcatctaccttcagtgctgtttccggcggatgatg
gccaagcgtgagctgaagaaactgaaaattgaggctcgctctgtggaacgctacaagaag
cttcatattggcatggaaaacaagattatgcagctgcagcgcaaagtggatgagcagaat
aaagactacaaatgcctcatggagaaactgaccaatctggaaggagtatacaactctgag
actgaaaaactacgaaatgatgtagaacgtcttcagttaagtgaggaggaagctaaggtt
gccactggtcgggtcctcagtctccaggaagaaattgccaagctccgcaaagacctggaa
caaactcgatcagagaaaaaatccattgaagaacgagcagataaatacaaacaagaaact
gagcagctggtgtctactctgaaggaagaaaacactttgctcaaacaggaaaaggagacc
ctcaatcacctcattgtggagcaagctaaggagatgacagaaactatggagagaaagtta
gtagaagagacaaaacagctggagcttgacctaaacgatgaaaggttgaggtatcagaac
cttctgaatgagtttagtcgtctggaggagcgctatgatgacctcaaggaggagatgacc
ctgatgctgaatgtgcctaagccaggacacaagagaacagactctactcacagcagtaat
gagtctgaatacaccttcagctctgaatttgcagaaactgaagacattgcaccaaggaca
gaggagccaagtgagaagaaggtgcctctagacatgtcattgttccttaagctccagaag
cgtgtcacagagctggaacaggagaagcaaataatgcaggatgagctggaccgaaaggaa
gagcagatgttccgcagcaaggcaaaggaagaagaaagaccaccaattagaggtgcagaa
ctggaatatgagtccctcaagcgtcaagaactggagtcagaaaacaaaaaactgaaaaat
gaactgaacgagttacgcaaagccctcagtgagaaaagtgccccagaagtgactgcacca
ggtgctcctgcctaccgtgtcctcatggaacagctgacctctgtgagtgaggagctcgat
gttcgaaaggaagaagttctcatcttacggtctcagctggtgagccagaaagaagccatc
caacccaagaatacaatgacagattccacaatacttttggaagatgtacagaaaatgaaa
gacaaaggtgaaatagcacaagcatatattggcttgaaagaaacaaacagatcatctact
atggattaccaggagttgaatgaggatggagagctctggctggtttatgaagggttaaaa
caagccaacaggctcttggaatcccagctacagtcgcagaagaggagccatgagaatgag
gccgaggccctccgtggggaaatccagagcctaaaggaagaaaacaaccggcaacagcag
ctactggcccagaacctgcagctgccccctgaggcccgcattgaagccagcctgcagcat
gagatcacacggctgaccaatgaaaacctgtattttgaggaattatatgcagatgaccct
aagaagtatcaatcatatcggatttcactttacaaaaggatgattgatttgatggaacaa
cttgaaaaacaggataaaactgtccggaaactgaaaaaacaactgaaagtctttgccaaa
aaaattggtgaacttgaagttggtcagatggagaacatctctccaggacagatcattgat
gagcctatccggccagtcaatattccccggaaagagaaggatttccaaggaatgctggag
tacaaaagggaggatgagcagaagcttgtgaagaacctgattctagaattgaagccacgt
ggtgtggctgtcaatttgattccagggttaccagcatacatcttatttatgtgtgtacga
catgctgattacctgaacgatgatcagaaagtaagatcattgctgacatcaacaattaac
agcatcaaaaaagtcttgaagaaaagaggtgatgattttgaaactgtctccttctggctc
tctaacacatgccgatttttgcactgtttgaagcaatatagtggagaagagggcttcatg
aaacacaacacatctcgccagaatgaacactgcctcaccaattttgaccttgccgaatat
cggcaagtgctaagcgacttggccattcagatctaccagcagcttgtgagagtgttagag
aacatccttcagccgatgatagtctcaggcatgctagagcatgaaacaattcagggtgta
tccggagtgaagcccacaggactcagaaagcgaacctccagtatcgcagacgagggcacc
tacacgctggactccatcctacgtcagctcaactccttccactcagtcatgtgtcagcat
ggcatggacccagagctaatcaagcaagtggtcaagcagatgttctacattgtgggcgcc
atcaccctcaacaacctcctcctgcgcaaggacatgtgctcttggagcaaaggcatgcag
atcaggtacaatgtcagtcaattggaagaatggctacgtgacaagaatctaatgaacagt
ggggccaaagagactctggaacctctcattcaggctgctcagcttttgcaagtgaagaag
aaaaccgatgatgacgcagaggccatctgctccatgtgcagcgccctgaccactgcccag
atcgtcaaggtattgaacctgtacaccccagttaatgagtttgaagaaagggtctctgtc
tcattcatccgcactatacagatgcggttacgagacaggaaagattctccacagctgctc
atggatgctaaacacatctttcctgtcacatttccctttaacccatcctccctggcccta
gaaaccatccagatcccagccagcctaggcttgggcttcattgcacgggtctga
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integrated database retrieval system
