Arvicola amphibius (Eurasian water vole): 119809827
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Entry
119809827 CDS
T08327
Symbol
Neo1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04350
TGF-beta signaling pathway
aamp04360
Axon guidance
aamp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
119809827 (Neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
119809827 (Neo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119809827 (Neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aamp04515
]
119809827 (Neo1)
Cell adhesion molecules [BR:
aamp04515
]
Immunoglobulin superfamily
DCC/UNC5 family
119809827 (Neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Ig_5
Fn3_VIN3
fn3_2
Tissue_fac
SusE
TMEM154
EphA2_TM
TM_ErbB1
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
119809827
NCBI-ProteinID:
XP_038178907
LinkDB
All DBs
Position
3:complement(127197263..127372746)
Genome browser
AA seq
1462 aa
AA seq
DB search
MAAEREARRLLSTSYSRRCCPTPLLLLLLLPRPLLSGAAAVRSGSPPQSAGASVRTFTPF
YFLVEPVDTLSVRGSSVILNCSAYSEPAPKIEWKKDGTFLNLVSDDRRQLLPDGSLFISN
VVHSKHNKPDEGFYQCVATVDNLGTIVSRTAKLTVAGLPRFTSQPEPSSSVYAGNSAILN
CEVNADLIPFVRWEQNRQPLLLDDRVVKLPSGTLVISNVTEGDGGLYRCIVESGGPPKYS
DEAELKVLPGPEEMPNLVFLMRPSSVSRVTGQNAVLPCVASGLPSPVTRWMKNEEVLDTE
SSERLVLLAGGSLEITDITEDDAGTYFCIADNGNKTIEAQAELTVQAPPEFLKQPANIYA
HESMDIVFECEVTGKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIA
ENDVGNAQAGAQLIILEHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLVST
RFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSQPGEMQVTIQNLMPATVYIFK
VMAQNKHGSGESSAPLRVETQPEVQLPGPAPNIRAHATSPTSITVTWETPLSGNGEIQNY
KLYYMEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLSDV
PSAAPQNLSLEVRNSKSIVIHWQPPSSATQNGQIIGYKIRYRKASRKSDVTETLVTGSQL
SQLIEGLDRGTEYNFRVAALTVNGTGPATDWMSAETFESDLDESRVPEVPSSLHVRPLVT
SIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAF
NNVGEGIPLYESAVTRPHTVPDPTPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDS
RYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGA
TFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE
PVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKALGSAGKGSRLPDLG
SDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVVVVIIAVFCTRRTTSHQKKKR
AACKSVNGSHKYKGNCKDVKPPDLWIHHERLELKPIDKSPDPNPVMTDTPIPRNSQDITP
VDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVVSAHPIHSLD
NPHHHFHSSSLASPARSHLHHPSSPWPIGTSMSLSDRANSTESVRNTPSTDTMPASSSQT
CCTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPPGPPIYDPAL
PSTPLLSQQALNHHIHSVKTASIGTLGRSRPPMPVVVPSAPEVQETTRMLEDSESSYEPD
ELTKEMAHLEGLMKDLNAITTA
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagcgcgaagccaggcgactcctcagcacctcttactcccggcgctgctgc
cccacaccgctgctgctgttgctgttgctgccgcggccgctgctgtccggcgccgcggcc
gtgaggagcggatccccgccgcagtctgcaggagccagtgttcgaacattcactccattt
tattttctggtggagccagtggatacactctcagttagaggctcttctgttatattaaac
tgctcagcatattctgagcctgctccaaaaattgaatggaagaaagatggaactttttta
aacttagtatcagatgatcgccgccagcttctcccagatggatctttattcatcagcaat
gtggtacattccaaacacaataagcccgatgaaggtttctatcagtgtgtagccactgtt
gataatcttggaactattgtcagcagaacagccaagctcacagtagcaggtcttccgaga
tttaccagtcaaccagaaccttcctcctcagtatatgctggaaacagtgcaattctgaat
tgtgaagttaatgcagatttaatcccatttgtaaggtgggaacagaatagacagcctctt
cttctggatgacagggttgtcaaacttccaagtggaacactggttatcagcaacgtgact
gaaggagatggaggactctaccgctgcatagttgaaagtggtgggccaccaaagtatagt
gatgaagctgaattgaaagttcttccaggtcccgaagaaatgccaaacttggtgtttttg
atgcgaccatcttctgtgagcagagttactggtcagaatgcagtgttgccatgtgttgct
tcaggacttccttctccagttactagatggatgaaaaatgaggaagtgcttgacacagaa
agctctgaaaggttggtgttgctagcaggaggtagtctggagatcactgacatcactgag
gatgatgctgggacttatttttgtatagctgataatgggaataagacaattgaagctcag
gcagagcttactgtgcaagctccacctgaattcttgaaacaacctgctaacatatatgct
cacgaatccatggatattgtatttgaatgtgaagtcactgggaagccaactccaactgtg
aagtgggtcaagaatggggatgtggttatcccaagtgattattttaaaattgtaaaggaa
cataatcttcaagttttgggtctggtgaaatcagatgaagggttctatcaatgcattgct
gagaatgatgttggaaatgcacaagctggagcccagctgataatccttgagcatgatgtt
gccatcccaacattacctcccacttcactgaccagtgccactactgaccatctagcacca
gccacaactggaccactgccttcagctcctcgggatgtcgtggcctctctggtctctacc
cgctttatcaaattgacatggcgtacacctgcatcagatcctcatggagacaacctcacc
tactctgtgttctacaccaaagaagggattgctagggagcgtgttgagaataccagtcag
ccaggagagatgcaggtgactattcaaaacttgatgccagcaactgtgtacatcttcaaa
gttatggctcaaaataaacatggttctggagagagttcagctcctctacgagtagaaaca
cagcctgaagttcagctccctggcccagcacctaatatacgagctcatgcaacgtcacct
acttctatcacagtcacatgggaaacaccactgtccggcaatggggaaattcagaattac
aaattgtactacatggaaaaagggactgataaagaacaggatgttgatgtttcaagtcac
tcctacactattaatggactgaaaaaatacacagagtatagtttccgagtggtggcctac
aataaacatggtcctggagtctccacacaagatgttgctgttcgaacattatcagatgtt
cccagtgctgctcctcagaatctgtccttagaagtgaggaattcaaagagtatagtgatt
cactggcagcctccttcttcagccacacaaaatgggcagattattggctacaagattcgt
taccgaaaggcctcccgaaaaagtgatgtcactgagaccttagtaactgggtcacagctg
tctcagctgattgaaggtcttgatcgggggacagaatataacttccgagtagctgctctc
acagtcaatggtacaggaccagcaactgattggatgtctgctgaaacttttgaaagtgac
ctagatgaatctcgtgttcctgaagtgcctagctctcttcacgtccgtccacttgtcact
agcatcgtagtgagctggactcctccagagaaccagaacattgtggttcgaggttacgcc
atcggttatggcattggcagccctcatgcacagaccatcaaagtggactataaacaacgt
tattacaccattgaaaacctggatccaagctctcattatgtgattaccctgaaagcattc
aacaatgttggcgaaggcatccccctttatgagagtgctgtgaccagacctcacacagtg
ccagatcccactcccatgatgccaccagtgggagttcaggcttccattctgagtcatgac
accataaggattacgtgggcggacaactccctgcccaaacaccagaagattacagattcc
cgctactacacagtccggtggaagaccaacatcccagcaaacaccaagtataagaatgca
aatgcaacaactttaagctatttggttactggcttaaagccgaatacgttatatgaattc
tctgtgatggtgaccaaaggtagaagatcaagcacatggagtatgacagctcatggagct
acgtttgaattagttcctacttctccacctaaagatgtgaccgttgtgagtaaagaagga
aaacctaggaccataatagtgaactggcagcctccctctgaagctaacggcaagattaca
ggttacatcatctattacagcacagatgtgaatgcagagatacatgactgggtcattgaa
cctgttgtgggaaacagactgactcaccagattcaagagttaacacttgatacaccatac
tacttcaaaatccaggcccggaactcaaaaggcatggggcccatgtctgaagctgtccag
ttcagaacacctaaagccttaggatcagcaggaaaaggaagccgactgccagatctagga
tctgactacaaacctccaatgagtggcagcaacagccctcatgggagccccacctctcct
ctagacagcaatatgctgctggtcatcattgtctctgttggtgtcatcaccattgtggtg
gttgtgatcatcgctgtcttttgtacccggcgcaccacttctcaccagaagaagaaacga
gctgcctgcaaatcagtgaatggttcccataagtataagggcaactgcaaagacgtgaag
cccccagacctatggatccatcatgagagactggagttgaagcctattgacaagtctcca
gatccaaaccctgtcatgactgatactccaatccctcgaaactctcaagatatcacacca
gtcgacaattccatggatagcaatatccatcaaaggcggaattcatacagagggcacgag
tcagaggacagcatgtctacactggctggaaggaggggaatgagaccaaaaatgatgatg
ccttttgactctcagccacctcagcctgtggttagtgcccatcccatccattccctcgat
aaccctcaccaccatttccactccagcagcctcgcttctccagcccgcagccatctccac
cacccaagcagcccatggcccattggcacatccatgtccctttcagacagggccaattcc
acagaatctgttcgaaatacccccagcacggacaccatgccagcctcctcatctcaaaca
tgctgcactgatcaccaggatcctgaaggtgctaccagctcctcttacttggccagctcc
caagaggaagactcaggccagagccttcccacagcccacgttcgcccttcccatccatta
aaaagctttgctgtgccagcaatcccacccccaggacctcctatctatgatcctgcattg
ccaagcacaccactactgtcccagcaagctctgaaccaccacattcactcagtcaaaaca
gcctccatcgggactttaggaaggagccggcctcctatgccagtggttgttcccagtgcc
cccgaagtacaggagaccaccaggatgctggaagactctgagagtagctatgaaccagat
gagctgaccaaagagatggcccacctggaaggactaatgaaggacctaaatgccatcaca
acagcttga
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