Arvicola amphibius (Eurasian water vole): 119809838
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Entry
119809838 CDS
T08327
Symbol
Neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119809838 (Neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119809838 (Neil1)
Enzymes [BR:
aamp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
119809838 (Neil1)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119809838 (Neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
119809838
NCBI-ProteinID:
XP_038178923
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All DBs
Position
3:complement(125289382..125295557)
Genome browser
AA seq
420 aa
AA seq
DB search
MPEGPELHLASCFVNETCKGLVFGGCVEKSSVSRNPEVPFESSAYHISAVARGKELRLTL
SPLPGAQPPQKPLSLVFRFGMSGSFQLAPADALPPHAHLRFYTAPPAPRLALCFVDIRRF
GHWDPEGEWQPGRGPCVLLEYERFRDKVLRNLSDKAFDRPICEALLDQRFFNGIGNYLRA
EILYRLKIPPFEKARTVLEALQQSRPSPELTLSQKIKAKLQNPDLLELCHLVPKEVVQLG
EAWEAKMASVLCFSSVRYWAAILLTLENGSLLNRPGGKGYGPERGEEDFAAFRAWLQCYG
MPGMSSLRDRHGRTIWFKGEPGPLAPKGGRSRKKKSKETQLGAEVRKEDLPLSSKTISRT
RRDRKHAPKSIAQQSEGTSLQQNQETPTAPKKGKRRGRLAATGRRRPPKSKVDTRSQEAS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccggagggcccagagctgcaccttgccagctgctttgtaaatgagacatgtaagggg
ctggtatttggcgggtgtgtggagaagtcctctgtcagccgcaaccccgaggtgcccttt
gagagcagtgcctaccacatctcagccgtagcccgaggcaaggagctgcgcctgactttg
agccccctgcctggtgcccagccccctcagaagccgctgtcccttgtcttccgctttggt
atgtctggatccttccagctggcacctgcagatgcactgccaccccatgcccatctacgt
ttttacacggccccacctgccccccggcttgccctctgtttcgtggacatccgccgtttt
ggccactgggatcctgagggtgaatggcagccaggccgtggaccctgcgtcttgctggag
tatgaacggttcagggacaaggtacttcggaacctatcagacaaagcctttgaccggccc
atctgtgaggccttgttggaccagagattcttcaatggcattggcaactatctgagagca
gaaatcttgtaccggctgaagatccccccttttgagaaggcccgcacagttctagaggct
ctgcagcagtcccggccgagcccagagctgaccctgagccagaagatcaaggccaaactg
cagaacccagacctgctggaactgtgtcacttggtacccaaggaagtggttcagctgggt
gaggcctgggaagccaagatggccagtgttctctgctttagctctgtgagatactgggca
gctatcctcttgaccctggagaatgggagtttgctaaacagaccagggggcaaaggctat
gggccagagcgtggagaggaggattttgctgcctttcgagcctggctgcagtgctatggc
atgccaggcatgagttccctgcgagaccggcacggccgtaccatctggttcaagggtgaa
cctggacccttggcacccaaagggggcagatcccggaaaaagaagtcaaaggagacacag
ctgggggccgaggtcagaaaagaggaccttccgctttcgagtaagaccatttccaggact
cggagggacaggaaacacgcccctaagagtatagctcaacagtctgaagggaccagcctc
caacaaaaccaggaaacccctacagcccccaagaaaggaaagagaagggggcgactggca
gccacaggtcgccgcagaccccctaagagtaaggtcgatacccgatcccaggaggcctca
tag
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