Arvicola amphibius (Eurasian water vole): 119809856
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Entry
119809856 CDS
T08327
Symbol
Dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119809856 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamp03041
]
119809856 (Dhx15)
03009 Ribosome biogenesis [BR:
aamp03009
]
119809856 (Dhx15)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119809856 (Dhx15)
Spliceosome [BR:
aamp03041
]
Complex A
U2 snRNP components
U2 related factors
119809856 (Dhx15)
Complex B
119809856 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
119809856 (Dhx15)
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
90S particles
Helicases
119809856 (Dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
119809856
NCBI-ProteinID:
XP_038178957
LinkDB
All DBs
Position
1:48673916..48715274
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccgtttggaccttggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagaccgggatagagaccgggatagagaagaccgatctaaagatcgt
gaccgagaacgtgatagaggagatagagagcgggagagggagaaagaaaaggaaaaggaa
ttgagagcttccaccaacgctatgcttatcagtgctggattgccacctttaaaagcttct
cattccgctcattcaacccactcagctcattcaacacattctacacattctgcccattca
acacacaccggacatgcaggacacacatcacttccacagtgcattaatccatttaccaac
ctgccccatactcctcgatattatgatattctaaagaaacggcttcagctccctgtttgg
gaatacaaggataggtttacagatattcttgttaggcatcagtcatttgtacttgttggt
gagactgggtctggtaagacaacacagataccacagtggtgtgtggagtatatgcgatca
ttgccaggacccaaaagaggagttgcctgtacacagcccagaagagtggctgcaatgagt
gtggctcagagagttgctgatgaaatggatgtgatgttaggccaggaagttggatactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatgggatg
ctacttcgtgaagccatgaatgatcccctcctggagcgttatggtgtgataattcttgat
gaggctcatgaaagaacattagctacagacattctcatgggtgttttgaaggaagttgta
agacaaagatcagatttaaaggttatagttatgagtgctaccctagatgctgggaaattc
cagatttactttgataactgtcctctcttaactattcctggccgaacacatcctgttgag
attttctatactcctgaaccagagagagattatcttgaagcagcaattcgaacagtgatc
cagatacatatgtgtgaagaggaggaaggagaccttctccttttcttgactggtcaagag
gaaattgatgaggcctgtaagagaataaagcgtgaagttgatgatttgggccccgaagtt
ggagatattaaaatcattccgttgtattctacacttccaccccagcagcagcaacgcatt
tttgagccaccacctccaaaaaaacagaatggagcaattggaagaaaggtggttgtgtca
actaacattgcagagacctctttgacaatagatggtgtggtgtttgtgattgaccctgga
tttgcaaagcaaaaggtatataatcctagaatcagagttgagtctctcttggtgacggca
attagtaaagcttcagctcagcaaagggctggtagagctggacggaccagacctgggaaa
tgcttccgactttatacagagaaagcttataaaacagaaatgcaggataacacctatcct
gagattttacgctctaatttaggatcagttgtattacaattgaagaagcttggtattgat
gacttggtacattttgattttatggacccaccagctcccgaaactctgatgagagcccta
gaacttctgaattacttggctgctttaaatgatgatggagatctaactgaattgggatcc
atgatggcagagtttcctctagatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccatgcttttaaacaaaatcatgaatct
gttcagtggtgttatgacaacttcattaactaccggtcgctgatgtctgcagacaatgta
cgccagcagctatcaagaattatggacagatttaatttgccccgtcgaagtactgatttc
acaagcagggactattatattaatataagaaaagcattggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggtccag
ttgcatccctctactgtgcttgatcacaagcctgaatgggtgctttacaatgagtttgtg
ctgacaacaaagaattacatccggacatgtacagacatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcattattgcaaaacttcagtccaaggaatattcacagtactga
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