Arvicola amphibius (Eurasian water vole): 119809887
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Entry
119809887 CDS
T08327
Symbol
Taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119809887 (Taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119809887 (Taf6l)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119809887 (Taf6l)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119809887 (Taf6l)
Coactivators
SAGA/TFTC/STAGA complex
119809887 (Taf6l)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119809887 (Taf6l)
STAGA complex
119809887 (Taf6l)
TFTC complex
119809887 (Taf6l)
SAGA complex
119809887 (Taf6l)
SLIK complex
119809887 (Taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
119809887
NCBI-ProteinID:
XP_038179014
LinkDB
All DBs
Position
1:complement(151867173..151882560)
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AA seq
625 aa
AA seq
DB search
MLGLQSSTETMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQN
SSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLV
ELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLG
DDAQLTKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLIRNPHLC
LGPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQIL
LSLQKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSNAQ
VKADGHKVYGAILVAVERLLKMKAQAAEPIRGGLGRRGCHRAEDLPWDSLLLESSPGGGA
EPGFGSGLPLPPGGARLEDPSSLTLAEIYRELYAFFGDSLATRFGTGQPAPTVPRPPGDK
KEPVAAPDSVRKMPQLTASAVVSPQGDESPLGGGPATASAASESRPLPRVHRARGAPRQQ
GPGTGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQK
LPMIGRTGRPARRWALSDYSLYLPL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcttgggctgcaaagctccactgagaccatgtcggagagagaagagcggaggtttgtg
gagatccctcgggagtcagttcgactcatggcagagagcacagggctggagctgagtgac
gaggtggcagctctgttggctgaagatgtgtgctaccgtctccgagaggccacacagaat
agctctcagttcatgaagcacaccaagcggaggaagctgacagtagaggatttcaacagg
gctctccggtggagcagtgtggaggctgtgtgtggctatgggtcccaggaggcactgccc
ttgcgccctgcaagagagggtgagctctactttccagaagaccgagaagtgaacctcgtg
gagctggcattggctaccaacatccccaagggctgtgcagagacagcagtcagagttcat
gtctcctatctggatggcaaaggaaaccttgcacctcagggatcagtgcccagcgcagtg
tcttcactgacagatgaccttctcaagtactaccagcaagtcacacgggctgtcctgggg
gacgatgcgcagctgacgaaggtcgccctccaggacctgcagacaaactccaagattgct
gcactcctgccttactttgtgtatgtggtcagtggggtcaaatctgtaagccacgacctg
gagcagctacaccgactactgcaggtggcacggagcttgatacggaacccacacctctgc
ttggggccctatgtccgatccctggtggggagtgtgctctactgcgtcttggagccactg
gccgcctccatcaaccctttgaatgaccactggactcttcgggatggggctgcgcttcta
ctcagccacatcttctggactcatggggaccttgtaagtggcctctatcagcagattctg
ctatccctgcagaaggtcctgacagaccctgttcggcctctctgttctcactatggggct
gtggtagggctgcatgctctgggctggaaggcagtagaacgagtcctctacccacatcta
cccacttactggacaaacttgcaggccgtgctggatgactattcggtatctaatgcccag
gtcaaagcagatgggcacaaagtctatggagctattctggtggccgtagagcgactactg
aagatgaaagcccaggcagcagagcccattcgcggtggccttggccggagagggtgccat
cgtgccgaggacctgccttgggacagccttctcctagagtcttccccgggaggcggtgcc
gaaccaggctttgggtctggtcttcccttgccgccaggaggcgcccggttagaggaccct
tcttccttgaccctggcagaaatctaccgagagttgtacgctttcttcggtgacagcttg
gccacacgcttcggcactggccagcccgcgcccacggtcccgcgcccacccggagacaag
aaggagccagtggccgccccggactcggtgcggaaaatgccgcagctgaccgctagcgcg
gtggtcagcccgcagggagacgagagcccgctcggcgggggccccgcgaccgcctctgcc
gcctcggagagcaggccgctgccgcgcgtgcaccgggcgcggggcgctcctcgtcagcag
ggtcctggcaccgggacgcgcgacgtcttccagaagagccgctttgcgccccgcggtgcc
cctcacttccgttttatcatcgctgggcgtcaggccgggcggcgctgccgcgggcgtctc
ttccagactgctttccccgcgccctacgggcccagcccggcgtcccgctacgtgcagaag
ttgcccatgatcggccgcaccggccgcccggcccgccgctgggcgctctcggactattcg
ctgtacctgcccctgtaa
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