KEGG   Arvicola amphibius (Eurasian water vole): 119809993
Entry
119809993         CDS       T08327                                 
Symbol
Wdr48
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    119809993 (Wdr48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aamp03400]
    119809993 (Wdr48)
DNA repair and recombination proteins [BR:aamp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     119809993 (Wdr48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 119809993
NCBI-ProteinID: XP_038179196
LinkDB
Position
3:185391087..185427007
AA seq 676 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAVWVATTKSTVNKWTLKGIHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHVT
PMDEEENEVNHVSGEQESRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETEAM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKPEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHFI
WKSGGDLTLHYRQKST
NT seq 2031 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacacagccgggcggaggaaagtgcaggtttcctatgtt
attcgagatgaagtggagaagtacaatcgcaatggagttaatgccctgcagctggaccca
gcactcaacaggctcttcaccgcagggcgggactccatcatcagaatatggagtgtcaat
cagcacaagcaagatccatacatagcatccatggagcaccacaccgactgggtgaatgat
gtcgtactctgttgcaatgggaaaacgttaatatctgcctcctctgacacgacagtcaaa
gtgtggaatgcacacaaaggattctgcatgtccacactcaggacacacaaggactatgta
aaggccctagcatatgccaaggataaagagctggtagcatcggctgggttggacagacaa
atattcctttgggatgtgaatactctgacagcattgactgcctcaaataacactgtcaca
acttcttccttaagtgggaacaaagattccatttatagcctggccatgaaccaactggga
acaatcattgtatccgggtccactgagaaggttctaagagtgtgggatccaagaacctgc
gcgaagctcatgaagctgaaagggcacacggacaatgtgaaggcgctgctgctgaacagg
gacggcacacagtgcctatctgggagttctgatgggacaattcgcctgtggtcccttggc
cagcagagatgtatagcaacgtaccgagtacacgatgaaggcgtttgggccctccaagtc
aatgatgccttcacacatgtgtattctggaggacgggacaggaagatttactgcacagac
ctaagaaaccctgacattcgggtgctgatttgtgaagaaaaggcaccagttctcaagatg
gagcttgacagatcagcagatccccctcctgcagtctgggttgcaacaacaaagtccaca
gtaaacaagtggacactgaagggaattcataatttccgagcctctggtgattatgacaac
gactgtacaaatcccataacccccctctgcacacagcccgaccaggttattaaaggtggc
gctagtatcattcaatgccacatccttaatgataagagacatatattaaccaaagataca
aataacaacgtggcatattgggacgtgttgaaggcatgcaaagtggaggatttgggcaaa
gtggacttcgaagacgaaattaagaaaagatttaaaatggtgtatgttccaaattggttc
tcagtagatctgaaaacagggatgctgacgattactctggatgaaagtgactgctttgct
gcctgggtttctgccaaagacgccggctttagcagtcccgacggctcagacccaaaattg
aacttaggaggactcctactacaggcacttctggagtactggccgagaacacacgtgact
cccatggatgaagaagaaaatgaagtcaaccacgtgagcggggagcaggaaagcagagtc
caaaagggaaatgggtatttccaagtgcccccacacacccctgtgatctttggtgaagct
ggaggtcgtacactgttcaggctgctctgccgggattccgggggcgagactgaggcgatg
cttctcaatgagacagtaccacaatgggtaattgacatcactgtggataaaaatatgccc
aaattcaacaaaattcctttctacctccaacctcatgcatcttcaggagcaaaaacttta
aaaaaagacagactctctgccagtgacatgctgcaggtccggaaggtgatggagcatgtc
tatgagaagatcatcaacctggacaacgagtctcagaccaccagctcgtcgaataacgaa
aagccagagcaggagaaggaagaggatattgctgtgttggcagaggagaaaattgaactt
ctgtgccaggaccaggttttggacccaaatatggaccttcgaacagtaaagcacttcata
tggaagagtggtggagacctcacactccattaccgtcagaagtccacgtga

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