Arvicola amphibius (Eurasian water vole): 119810107
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Entry
119810107 CDS
T08327
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119810107
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
119810107
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
Mucin2_WxxW
Ig_3
CILP_5th
TSP_1
I-set
Ig_2
ig
CarboxypepD_reg
TSP1_CFP_C
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
119810107
NCBI-ProteinID:
XP_038179366
LinkDB
All DBs
Position
3:133773318..133788343
Genome browser
AA seq
1250 aa
AA seq
DB search
MAAIKTWVLSFLVLEFTIVLGRQTMLTQSVRRVRPVKRTSNAFAKPADSLDSPGEWTTWF
NIDHPGGQGDYERLDAIRFYYGERVCARPLRLEARTTDWMPAGSTGQVVHGSPREGFWCL
NREQRPGQNCSNYTVRFLCPPGSLRGDSERIWSPWSPWSKCSAACGHTGVQTRTRTCLAQ
TVSLCGEASEEGQLCVSPACTACDLTCPMGQVNADCDACMCQDFMLYGAISLPGGAPAPG
ATVYLLTKAPKMLTRTDSRGRFQVPGLCPDGKSILKITKTKFAPIVLTMPKTGLKSATIN
AEFVRAETPYIVMNPETKARRAGESVSLCCKATGKPSPDKYLWWVNNTLLDPSLYKHESK
LVLRNLQQDQAGEYFCKAQSDAGAVKSKVAQLMVIAHDESPCNPTPESYLIRLPHTASRC
HNSFYYDVGRCPIKTGAGQQDNGNPVPGLPWRTAVCISRTEEREIQCSGYNAAHQVAMEC
SCQRCTETRSIIRGRVSAADNGEPMRFGHVYMGETVLSMTGYKGKRSPLHIPQDTERLXL
TFVDRLQKFVNTTKVLPFNRKGSAVFHEIKMLAGRKEPITLEAMETNIIPLGEVGWXRPL
AELEIPSKSFYRHNGEPFTGKVRASVTFLDPRNISTATAAQSDLNFITMKETTLPLRTYG
MFSVTSGMRATSESLNAGKVEGPPDSNQVKDAQSMCQLXTLWSLNPDTGLWEEEGDFKFE
SQRRNKREERTFLVGNMEIRERRLFNLDVPESRRCFIKVRTYRSERFLPSEQIQGVVVSV
INLEPKTGFSSNPRAWGRFDSVITGPNGACLPAFCDDHSPDAYSVYVLASLSGEELEAVE
SSPKFNPNAIXVPQPYLNKLKXPSDRHEDPRVKKTAFQISMAKPRPNSSEESNGPXYAFE
NLRACEEAPPSAPHFRFYQIEGDRYDYNTVPFNEDDPMSWTEDYLAWWPKPMEFRACYIK
VKIVGPLEVNVRSRNMGGTHRQTVGKLYGIRDVKSTRDRDQPXVSSACLEFKCSGMLYDQ
DRVDRTLVKVIPQGSCHRASVNSMLHEXPGQPPSPXQSNNDTSEYTMLAPLDPLGHNYGI
YTVTDQDPRTAKEIALAGALDGTSDGSSRIMKSNVGVALTFNCAXRQVGRQSAFQXPPKR
PARPSXVPSCGHGPGRVPSMRQQRASRGGLRRRGELAPLRYSGVGQQTSEQLSVGVLHSF
LCPPHVTTVVRQLHRLSLVNLNRFVLVQLASVCLYLLSLSCDTGWHMPPK
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaatcaagacctgggtactctctttcctggtcctggagttcaccattgtgctc
gggagacagactatgcttacccagtcagtgagaagagtccgacctgtgaagaggacctct
aacgcctttgccaagccggctgactccctggacagtcctggtgagtggacaacttggttt
aacatcgaccacccaggtgggcagggtgactatgagcgattggatgctattcgcttctac
tatggggagcgtgtgtgtgcccgtcccctgcggctagaggcccggaccactgactggatg
cctgcgggcagcactggccaagtggttcatggcagtccccgtgagggcttctggtgcctc
aacagggaacagagaccaggccagaactgctccaattatacagtgcgcttcctctgccca
ccagggtccttgcgaggagattcagagcgcatctggagtccttggtctccatggagcaag
tgctcagctgcctgtggtcacactggggtccagacccgtacccgcacctgcttggctcag
acagtgtctctgtgcggtgaggcctccgaggaaggccagctttgtgtgagtccggcctgc
acagcctgtgacctgacctgtcccatgggccaggtgaatgctgactgcgacgcctgcatg
tgccaggacttcatgctttatggggccatctccctccccggaggtgccccagctccaggg
gccactgtctacctgttgaccaaggcaccaaagatgttgacccggacagacagcagaggg
aggtttcaagttcctggcttgtgtcccgatggcaagagcatcctgaaaatcaccaagacc
aagtttgctccaattgtgctcacgatgcccaagactggcctgaagtcagccaccatcaat
gcagagttcgtgagggcagagactccatacattgtcatgaaccctgagacgaaagcacgg
agggccggggagagtgtgtccttgtgttgcaaggcgacaggaaaacccagtcccgacaag
tacctctggtgggtcaacaatacattgctggatccctctctctacaagcacgaaagcaag
ctggtgctgaggaacctgcagcaggaccaggcaggggagtatttctgtaaggcacagagt
gatgctggagctgtgaagtccaaggtcgcccagctgatggtaatcgcacatgatgagagt
ccttgcaacccaacccctgagagctaccttatccggctgccccatactgcttccagatgc
cacaactccttctactatgatgtaggccgctgcccaatcaagaccggtgcagggcagcaa
gacaatgggaatccggtgccgggattgccatggagaactgctgtgtgcatctccagaaca
gaggagagggagatccagtgcagtgggtacaacgctgcccaccaagtggccatggagtgc
agctgccagcgatgtacagagacacggagcatcattaggggccgagtcagtgctgctgac
aatggggagcccatgcgctttggccatgtgtacatgggggaaaccgtgttgagcatgact
ggctacaagggcaaacgttcacccctccacatcccccaggatacagagagactgngtctc
acatttgtggacaggctacagaagtttgtcaacactaccaaagtgctgcccttcaacaga
aaggggagtgccgtgttccatgagatcaagatgcttgcgggcagaaaagagcccatcaca
ttggaagccatggaaaccaatatcatccccctgggagaggtgggttggtgaagacccttg
gctgaacttgagattccatccaaaagtttctataggcataatggggagcccttcacagga
aaggtgagggccagcgtgaccttcctggaccctcggaatatatccacggccacagctgcc
cagagtgacctgaacttcatcacgatgaaggagacaaccttgccccttcgaacatacggt
atgttctcggtgacttcagggatgagggccacttctgagtcactgaatgctggcaaggtg
gaaggcccacctgactcgaaccaggtgaaagatgcccagagcatgtgtcagctatgaaca
ctctggtcgctcaacccagacacaggactgtgggaagaggaaggtgatttcaaatttgaa
agccaaaggaggaacaagagggaagagaggacctttctagtgggcaacatggagatccgt
gagagaaggctctttaacctggatgtccctgaaagccgaaggtgcttcatcaaggtgagg
acttaccggagtgagaggttcttgcctagtgagcaaatccagggggttgtagtctcggtg
atcaacctggagcccaaaactggcttctcctctaaccccagggcctggggccgatttgac
agtgtcatcaccggccccaacggagcctgcctgcctgccttctgcgatgaccattcccct
gacgcttactccgtctatgtcttggcaagcctttctggagaagaactagaggctgtagag
tcttctcctaaattcaacccaaatgccatcngtgtccctcagccctacctcaacaaactt
aaataaccgtcggacagacatgaggatccacgtgttaaaaagacggctttccaaatcagt
atggccaagccaaggcctaactcatctgaagagagcaatggcccantctacgcttttgag
aaccttcgggcatgtgaagaggcgccgcccagtgcgccccacttccggttctatcagatt
gagggggatcgctatgattacaacacagttcctttcaatgaagatgaccccatgagctgg
actgaagactacctggcatggtggcccaagccaatggagttcagggcctgctacatcaag
gtaaagatcgtggggcccctagaggtgaatgtacgatcccgtaacatggggggcacgcac
cggcagactgtaggaaagctctatgggatccgagatgtgaagagtactcgggacagagac
cagccanatgtctcatctgcctgcctggagttcaagtgcagtggaatgctctatgaccaa
gaccgcgtagaccgcacattagtgaaggtcatcccccagggcagctgccatcgagccagt
gttaactctatgctgcatgagtaacctggtcaaccaccttccccctagcagtcaaacaat
gacaccagtgagtacaccatgctggcacccctggaccctctgggccacaattacggtatc
tacactgtcacggatcaggaccctcgtacagctaaggagattgcattggccggtgctttg
gatggtacttccgacggctcctccagaatcatgaagagcaatgtgggagttgccctgacc
tttaactgtgcanagaggcaggtaggccgccagagtgccttccagtaacctccaaagcgc
ccggccaggcccagctaggtccccagctgcgggcacggcccaggaagagtgccgtccatg
aggcaacagcgggcaagcaggggtggcctgcgccggcgtggagaattggcccccctgaga
tattctggggttggtcagcaaacctctgagcaactaagtgttggggttcttcatagtttc
ctctgtccgcctcacgtgacaacggttgtgagacagttgcacagattgtcacttgttaat
ttaaacagatttgttttggtgcagcttgcttctgtgtgcctttacttattgtccttatct
tgtgatactggctggcacatgcccccaaaatga
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