Arvicola amphibius (Eurasian water vole): 119810172
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Entry
119810172 CDS
T08327
Symbol
Drosha
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03008
Ribosome biogenesis in eukaryotes
aamp05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119810172 (Drosha)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
119810172 (Drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119810172 (Drosha)
03009 Ribosome biogenesis [BR:
aamp03009
]
119810172 (Drosha)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119810172 (Drosha)
Enzymes [BR:
aamp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
119810172 (Drosha)
Messenger RNA biogenesis [BR:
aamp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
119810172 (Drosha)
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
90S particles
RNase
119810172 (Drosha)
Prokaryotic type
rRNA processing factors
119810172 (Drosha)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
119810172 (Drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
TPR_14
Motif
Other DBs
NCBI-GeneID:
119810172
NCBI-ProteinID:
XP_038179450
LinkDB
All DBs
Position
3:complement(21324157..21434612)
Genome browser
AA seq
1373 aa
AA seq
DB search
MQGNTCHRMSFHPGRGCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPSG
TYSNSQAPNFMPPRPDFVPFPPPMPPSTQGPVPPCPVRPPFPNHQMRHPFPVPPCFPPMP
PPMPCPNNPPVSGAPPGQGSFPFMVPPPSMPHPPPPPVMPQQVNYQYPPGHSHSFPPPNF
NSFQNNSSSFPPSANNSSSPHFRHLPPYSLPKAQSERRSPERLKHYDDHRHRDHSHGRGE
RHRSLERRERGRSPERRRPDSRYRSEYDRGRTPSRHRSYERSRERERERHRHRDNRRSPS
LERTYKKEYKRSGRSYGLPVAPEAAGCTPESPGEITKNADSWAPAPETAANHRSPSREKK
RARWEEEKDRWSDSQSSVKEKNYTSIKEKEPEEALPDRNEEEEEELLKPVWIRCTHSESY
YSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGNRQEKAKAARPPWEPPKTKLDEDLESSS
ESECESDEESTCSSSSDSEVFDVIAEIKRKKAHPDRLHDELWYNDPGQMNDGPLCKCSAK
ARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRITVSPPTNFLTDRPTVIEYDDHEYIF
EGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCVKGLELFSLFLFRDILELYD
WNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVLSMHQILLYLLRCSKALVPEEEIAN
MLQWEELEWQKYAEECKGMIVTNPGTKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQ
LSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQKLAQREEALQKIRQKNTMRREVTVE
LSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLIGYTFQDRCLLQLAMTHPS
HHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGINTLINIMSRLGQDDPTPSR
INHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRF
MLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEARQLFGRLLFNDPDLREVWLHY
PLHPLQLQEPNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRLLARAFTLRTVGFNHLTLG
HNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYAI
TNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDP
KSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAE
MGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQEREPDEAEDVKK
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggaatacgtgtcacagaatgtcattccacccaggacgagggtgtccccgagga
cgaggaggacatggagccagaccctcagcgccagctttcaggccacaaaatctgagactt
cttcatccgcagcagcctcctgtgcaatatcaatatgaacctccaagtgcaccttcgggc
acgtactcgaactctcaagcccccaattttatgcctcctcgaccagactttgtacctttt
cctccacccatgccgccgtcaacccaaggccctgtgcctccctgccctgttaggccccct
ttccccaaccaccagatgagacaccctttccctgttcctccctgttttccacccatgccc
cctccaatgccttgccctaataacccaccggtctctggagcacctcctggacaaggctct
ttcccctttatggtgcccccaccttccatgccccacccaccaccccctcctgtcatgccc
cagcaggttaattaccagtaccctcctggccactcacacagtttcccacctcccaacttc
aacagtttccagaacaactccagttcttttccacccagtgctaacaatagcagtagccct
cattttagacacctccccccgtactcactcccaaaggctcagagtgagagaaggtcccca
gaaaggcttaagcactatgatgaccaccgacaccgagatcacagtcatgggcgaggtgag
aggcatcggtccctggagcgcagagagcgaggccgcagccccgaaaggagaagacccgat
agccgctaccggtcagagtatgaccgggggagaacgccttctcgccaccgcagctacgaa
aggagcagagagcgggaacgagagagacacaggcaccgggacaaccgcagatcaccatct
ctggagaggacctacaagaaagagtataagagatccgggaggagttacggtttaccagtt
gctcctgaagctgccgggtgcacaccagaatcacctggggagattacaaaaaatgcagat
tcctgggccccagctccagagaccgctgccaatcatcgttctccaagcagggagaagaag
agagctcgctgggaggaggaaaaagacagatggagtgacagccagagctctgtcaaagag
aagaactacacttccatcaaagaaaaagagcccgaggaggcgcttcctgacagaaatgag
gaggaggaggaggagctgcttaaacctgtgtggattcgatgcacacattcagagagctat
tactccagcgaccccatggatcaggtgggagattccactgtcgtcgggacaagtaggctc
cgtgacttatacgacaaatttgaggaagagttggggaacaggcaagagaaggccaaagct
gctcggcccccgtgggaacctccgaagacaaagttagatgaagatttagagagttccagt
gagtctgaatgcgagtctgacgaggagagcacctgctccagcagctcagactccgaggtg
tttgatgtcattgccgagattaaacgcaaaaaggctcaccctgaccggcttcatgatgaa
ctctggtacaacgacccgggccagatgaacgatggaccactttgcaaatgcagcgccaaa
gccagacgcacaggaatccggcacagcatctatcctggagaagaggcaatcaagccctgc
cgtcccatgactaacaacgctggacgtcttttccactaccggattaccgtctccccacct
accaactttttaaccgacaggccaacagttatagaatatgatgatcacgagtatatcttt
gaaggattttctatgtttgcacatgcccccctgaccaatattccactgtgtaaagtgatt
aggttcaacatagactacacgatccactttattgaagagatgatgcctgagaatttttgt
gtaaaaggacttgaactgttttcacttttcctattcagagatattttggaactgtatgac
tggaatcttaaaggtcctttgtttgaagacagtcctccctgctgtccaagatttcatttc
atgccacgttttgtaagatttcttccagacggcggcaaagaagtgttatccatgcaccag
atccttctctacttgctccggtgtagcaaggcgctggtgcctgaggaggagatcgccaat
atgctccagtgggaggagcttgagtggcagaaatatgccgaagaatgcaaaggcatgatt
gttaccaaccctgggacgaaaccaagctctgtccgcattgatcaactggatcgtgagcaa
ttcaaccctgatgtcattacttttccaattatcgtccactttgggatacgccctgcacag
ttgagttatgcaggagacccacagtaccaaaaattatggaaaagttatgtgaaacttcgc
cacctcctggcaaatagtcccaaagtcaaacaaacggacaaacagaagctggcgcagagg
gaggaagcgctccagaaaatacggcagaagaacacgatgcgacgagaagtgactgtggag
ctcagcagccaaggattctggaaaacgggcattcgttccgatgtctgtcagcatgccatg
atgctgcctgttctgacccatcacatccgataccatcaatgcttgatgcacttggacaag
ctgataggatacactttccaagaccgctgtctgctacagctggccatgactcatccgagt
caccatttaaacttcgggatgaatcctgatcatgccaggaactctttatccaactgtgga
attcgacagcccaaatacggagacaggaaagtccatcacatgcacatgcggaagaaagga
attaacaccctaataaatattatgtcacgtcttggccaagatgatccaactccttcaagg
attaatcacaacgaaagattggagttcctgggagatgctgtcgttgagtttctgaccagt
gtccacctgtactatttgtttcctagtctggaagaaggcggcttggcaacctatcggacg
gccattgttcagaaccagcacctggccatgcttgcgaagaaacttgaactggatcgattt
atgctgtatgcccatgggccggacctgtgtagagaatcagacctccggcatgcaatggcc
aattgttttgaagcattgataggagccgtttacttggagggcagcctggaggaagccaga
cagttatttggacgcttactctttaatgacccggacctacgagaagtctggctccattat
cctctccacccactccaactacaagagccaaatacagatcgacaacttattgaaacttct
ccagttctgcagaaacttacagagtttgaagaggcaattggagtaatttttacccacgtt
cgacttctggcaagggcgttcactctgagaactgtgggattcaaccacctgaccctaggc
cacaaccagaggatggaatttctaggggactccataatgcagctggtagccacggagtac
ttgttcattcatttccccgatcatcatgaaggacacctaacattgttgcgaagttctcta
gtgaacaacagaactcaagccaaggtagcagaggagctgggcatgcaggagtatgccatc
accaacgacaaaaccaagaggcccgtggccctgagaaccaagacgctggcggaccttttg
gaatcatttattgcagccttgtacattgacaaggacttggaatatgtccatactttcatg
aacgtctgcttcttcccacggctgaaggagttcattttgaatcaggattggaatgacccc
aagtcgcagctgcagcagtgttgcctgacccttaggacagaagggaaagagccggacatc
cccttgtacaagactctgcagacagtggggccttcccatgctagaacctacactgtggct
gtttacttcaaaggagaaaggataggctgtgggaaaggaccaagtattcagcaggcagaa
atgggagcagcaatggacgcacttgagaaatataactttccccagatggcccatcagaag
cggttcatcgagcggaaatacagacaagagttaaaagaaatgagatgggaaagagagcat
caagagagagagccagatgaggctgaagacgtaaagaagtag
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integrated database retrieval system
