Arvicola amphibius (Eurasian water vole): 119810186
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Entry
119810186 CDS
T08327
Symbol
Zc3h12c
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119810186 (Zc3h12c)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
119810186 (Zc3h12c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
DUF3723
Motif
Other DBs
NCBI-GeneID:
119810186
NCBI-ProteinID:
XP_038179476
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All DBs
Position
3:complement(120336936..120396989)
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AA seq
884 aa
AA seq
DB search
MAAEKTLQEYGVLCIQEYRKSSKVESSVRNSFMGLKDHLGHDLGHLYMESTDPQMSAAVP
WPMAEKPTMDTVNSGKEEKEVSEENVSSGDSEESTNSDHESGQLSSLSVEPCLLTKAHRQ
LCRSPCLEPHLLKHSDILQDFKPDGSQTPSKEVKKPPDVVREYQTKLEFALKLGYSEEQV
QLVLNKLGTDALINDILGELVKLGNKSEADQTVSTINSVMREASSLESQRSESPMQEIVT
DDGENLRPVVIDGSNVAMSHGNKEVFSCRGIKLAVDWFLERGHKDITVFVPAWRKEQSRP
DALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDL
ANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYG
KKCTYGHKCKYYHPERGSQPQRSVADELRAMSRNTAAKTPNEGGLVKSNSVPCSTKVDST
SDGKRGAPKRQSDPSIRTHVYQDIEEKLPTKNKLETRSVPSLVSIPATPTAKPQSTTSLS
NGLPSGVHFPPQDQRPQGQYPPMMMATKNHGTPMPYEQYPKCDSPVDIGYYSMLNAYSNL
SISGPRSPERRFSLDTDYRVNSVASDCSSEGSMSCGSSDSYVGYNDRSYVSSPDPQLEEN
LKCQHMHPHSRLNSQPFLQNFHDPLTRVQSYSHEEPKFHPKPPLPHLAMHLQHPAVGARS
SCPSDYPSPPSSTHSKAPHLGRSLVATRIDSISDSRLYDSSPSRQRKPYSRQEGLGSWDR
PSYGMDAYGYRQTYSLPDNSTPPCYESITFQSLPEQPEPTWRIPYCGMPQDPPRYQDNRE
KIFINLCNIFPPELVRLVMKRNPHMTDAQQLAAAILVEKSQLGY
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagaagacactgcaggaatacggggtgctgtgcattcaagaatacaggaaa
agtagcaaagtagaatcaagtgtgcggaacagcttcatgggcctgaaggatcacctgggg
catgaccttggtcacctttatatggagagtactgacccgcagatgagcgcagctgtgccg
tggcctatggcagagaagccaacaatggatacagtcaattcagggaaggaagaaaaagag
gtgtctgaagagaatgtgagctccggtgactctgaagaaagcacaaattctgatcatgag
tcaggacaactgagtagcctttcagtagagccatgcttattaaccaaggctcacagacag
ttatgtcggtctccctgcttagagccccacctactcaaacacagtgacattttgcaagac
tttaaaccagatgggtcccagactccatccaaggaagtaaagaaaccccctgacgtagtt
cgagaataccaaacaaaactggagtttgcactgaaattaggttattctgaagagcaggtc
caacttgtgctgaacaaacttggtactgatgctttaatcaatgacatattgggagaactt
gtcaaacttggaaataaaagtgaagcggatcaaacagttagtactataaacagtgtaatg
agggaagcatcgtctctggaatctcagaggtctgagtctccaatgcaagagattgtaaca
gatgatggtgaaaatctgagaccggtcgttattgatggcagcaatgtggcaatgagccat
ggaaacaaagaagtattctcctgccgaggaataaaattagcagtggattggtttttggaa
agaggccacaaagatattacggtttttgtccctgcttggagaaaagagcagtcccgacct
gacgctctcatcacagaccaggaaattctgcggaaactagagaaggaaaaaatcctggta
tttacaccttcccggcgcgtccaaggcaggcgagtggtatgctatgatgaccggttcatc
gtgaagctggcctttgagtctgatggtataattgtgtccaatgataactacagagatttg
gcaaatgagaaaccagaatggaagaagttcatagatgaacggttattaatgtattccttt
gtcaatgacaaattcatgccccctgatgaccctcttggaagacatggcccaagtctggat
aattttctgcgaaagaaacccatcgttcctgagcacaaaaagcaaccttgtccatatgga
aagaagtgcacctacggacacaagtgcaaatattaccacccagagaggggcagccagcct
cagcggtcagtagctgatgaacttcgtgccatgtctagaaacacagcagccaagactcca
aacgaaggaggactggtgaagagcaacagtgtcccttgtagcacgaaggtggacagcact
tcagacggtaaacgaggtgctccgaagaggcagtcagacccaagcataaggactcacgtc
taccaagacatagaggaaaagcttcccaccaaaaacaaattggaaaccaggtctgtacct
tccttagttagtataccggccactcctactgcaaaaccccaaagcactacatctttaagc
aatggccttccatctggagttcatttcccacctcaggatcaaagaccacagggacagtac
cctccaatgatgatggcaaccaaaaatcatggaacgccaatgccttatgaacagtatcca
aaatgtgactctcctgttgacattggatattattccatgttgaatgcgtattcaaatctg
agtatctcaggcccccgaagtcctgaaaggcgtttctcattagacactgactatcgagtg
aattctgtagcttcagactgcagcagtgaaggaagcatgagctgtgggagcagcgactcc
tatgtggggtacaatgaccgttcctatgtcagctctcctgacccacaactagaagagaat
ctgaagtgtcaacacatgcaccctcacagccgccttaattcccagcccttcctgcagaat
ttccatgaccccttaaccagagtgcaaagttacagtcacgaagaaccaaagttccatccc
aagcctccccttccgcacttggctatgcatctgcagcaccctgctgtgggtgcccggtcc
agctgtcccagtgattacccctctccaccaagctccacacactcgaaggcaccacacctc
gggaggtccctagtggccacgagaatagacagcatttctgattctcgactctatgatagt
tctccttcaagacaaagaaagccttactcacgccaggaaggcctaggaagctgggatagg
ccaagctatgggatggatgcctacggctatcggcagacttactccttacccgataactcg
acacccccgtgttacgagtcaatcaccttccagagcctgcctgagcagccggagcccacc
tggcgaatcccgtactgtggcatgccacaagatcccccgaggtaccaggacaaccgagag
aagatttttatcaatttgtgcaacatcttcccccctgaacttgtgaggctcgtcatgaaa
aggaatccccacatgacggatgctcagcagcttgccgcagccatcctcgtggagaaatcc
cagctggggtattga
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