Arvicola amphibius (Eurasian water vole): 119810208
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Entry
119810208 CDS
T08327
Symbol
Trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119810208 (Trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119810208 (Trip13)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
119810208 (Trip13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
AAA_16
nSTAND3
AAA_18
Viral_helicase1
AAA_14
AAA_25
AAA_33
AAA_28
AAA_5
TsaE
IstB_IS21
ATPase_2
NPHP3_N
Cytidylate_kin
RuvB_N
RNA_helicase
DUF815
AAA_11
AAA_17
ABC_tran
NACHT
AAA_7
bpMoxR
AAA_30
AAA_RNF213_4
AAA_24
TIP49
Mg_chelatase
ATPase
PduV-EutP
AAA_19
Rad17
PhoH
nSTAND1
nSTAND6
NB-ARC
SLFN-g3_helicase
AAA_3
Motif
Other DBs
NCBI-GeneID:
119810208
NCBI-ProteinID:
XP_038179504
LinkDB
All DBs
Position
3
Genome browser
AA seq
432 aa
AA seq
DB search
MDEAVGDLKQALPCVVESPAVHVEVLQRRSSTAKKEDIKLSVQKLLNRHNIVFGDYTWTE
FDEPFLTRNVQSVSIVDTELKVKDSQPIDLSACTIALHVFQLNEDGPTSENLDEETENII
AASHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTRMFQKIQDLI
DDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSN
ITEKIDVAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYIQAPSVTIEGFLQALSLAVDK
QFEEKKKLSAYV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcggtgggcgacctgaagcaagcgcttccctgtgttgtcgagtcgcccgcg
gttcacgtggaggtcctgcagcgccgcagcagtactgcaaaaaaagaagacataaagctg
agtgttcaaaaactgctcaacaggcataatattgtgtttggagattacacgtggactgag
tttgatgaaccttttctgaccagaaatgtccagtctgtttctattgttgacacagaatta
aaggtcaaagactctcagcccattgatttgagcgcatgcaccatcgcacttcacgtcttc
cagttgaatgaagacggccccaccagtgaaaatttggatgaagagacagaaaatataatt
gcagcaagtcactgggttctgcctgcagctgaatttcatgggctttgggacagccttgtg
tatgatgtggaggtcaaatcacatctccttgattatgtgatgaccaccttactgttctca
gacaagaatgtggacagcaaccttatcacctggaaccgggtagtgctactgcacggtcct
ccaggaactggaaaaacttccctttgtaaggcattagcacagaaactgaccatcagactg
tcaagcaggtaccggtatggccagttgattgaaataaacagccacagcctattttctaag
tggttttcagaaagcggcaagttggtaactaggatgttccagaagattcaggacttgatt
gatgataaggaagctctggtgtttgtgctgattgatgaggtggagagtctcacagctgct
cgaaatgcttgcagggcaggcgcagagccatcagatgctatccgtgtagtcaatgctgtc
ttgacgcaaattgaccagattaaaaggcattccaatgtggtaattctgaccacttccaac
atcactgagaagattgacgtggcttttgtggacagagctgacatcaagcaatacattgga
cccccttctacagcagccatcttcagaatctacctctcttgtttagaagaactgatgaag
tgtcagatcatatatcctcggcagcagctgctcaccctccgagagctggaaatgattggc
ttcattgaaaataatgtgtcaaagctgagcctccttttgagtgaaatttcaagaaagagt
gagggcctcagtggccgggtcctgagaaaactccctttcctggctcatgcactctacatc
caggctcctagcgttaccatcgagggtttcctccaggccctgtctctggcagtggacaag
cagtttgaggagaaaaagaagctttcagcttatgtttga
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