KEGG   Arvicola amphibius (Eurasian water vole): 119810208
Entry
119810208         CDS       T08327                                 
Symbol
Trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
  KO
K22399  pachytene checkpoint protein 2
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    119810208 (Trip13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aamp03036]
    119810208 (Trip13)
Chromosome and associated proteins [BR:aamp03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Others
     119810208 (Trip13)
SSDB
Motif
Pfam: AAA_lid_TRIP13_C TRIP13_N AAA AAA_22 AAA_16 nSTAND3 AAA_18 Viral_helicase1 AAA_14 AAA_25 AAA_33 AAA_28 AAA_5 NPHP3_N ATPase_2 Cytidylate_kin RuvB_N TsaE RNA_helicase AAA_24 DUF815 AAA_11 ABC_tran NACHT AAA_17 IstB_IS21 AAA_30 bpMoxR AAA_7 TIP49 Mg_chelatase ATPase PduV-EutP AAA_19 Rad17 PhoH SLFN-g3_helicase nSTAND1 AAA_3 NTPase_1
Other DBs
NCBI-GeneID: 119810208
NCBI-ProteinID: XP_038179504
LinkDB
Position
3:436786..455512
AA seq 432 aa
MDEAVGDLKQALPCVVESPAVHVEVLQRRSSTAKKEDIKLSVQKLLNRHNIVFGDYTWTE
FDEPFLTRNVQSVSIVDTELKVKDSQPIDLSACTIALHVFQLNEDGPTSENLDEETENII
AASHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTRMFQKIQDLI
DDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSN
ITEKIDVAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYIQAPSVTIEGFLQALSLAVDK
QFEEKKKLSAYV
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggacgaggcggtgggcgacctgaagcaagcgcttccctgtgttgtcgagtcgcccgcg
gttcacgtggaggtcctgcagcgccgcagcagtactgcaaaaaaagaagacataaagctg
agtgttcaaaaactgctcaacaggcataatattgtgtttggagattacacgtggactgag
tttgatgaaccttttctgaccagaaatgtccagtctgtttctattgttgacacagaatta
aaggtcaaagactctcagcccattgatttgagcgcatgcaccatcgcacttcacgtcttc
cagttgaatgaagacggccccaccagtgaaaatttggatgaagagacagaaaatataatt
gcagcaagtcactgggttctgcctgcagctgaatttcatgggctttgggacagccttgtg
tatgatgtggaggtcaaatcacatctccttgattatgtgatgaccaccttactgttctca
gacaagaatgtggacagcaaccttatcacctggaaccgggtagtgctactgcacggtcct
ccaggaactggaaaaacttccctttgtaaggcattagcacagaaactgaccatcagactg
tcaagcaggtaccggtatggccagttgattgaaataaacagccacagcctattttctaag
tggttttcagaaagcggcaagttggtaactaggatgttccagaagattcaggacttgatt
gatgataaggaagctctggtgtttgtgctgattgatgaggtggagagtctcacagctgct
cgaaatgcttgcagggcaggcgcagagccatcagatgctatccgtgtagtcaatgctgtc
ttgacgcaaattgaccagattaaaaggcattccaatgtggtaattctgaccacttccaac
atcactgagaagattgacgtggcttttgtggacagagctgacatcaagcaatacattgga
cccccttctacagcagccatcttcagaatctacctctcttgtttagaagaactgatgaag
tgtcagatcatatatcctcggcagcagctgctcaccctccgagagctggaaatgattggc
ttcattgaaaataatgtgtcaaagctgagcctccttttgagtgaaatttcaagaaagagt
gagggcctcagtggccgggtcctgagaaaactccctttcctggctcatgcactctacatc
caggctcctagcgttaccatcgagggtttcctccaggccctgtctctggcagtggacaag
cagtttgaggagaaaaagaagctttcagcttatgtttga

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