Arvicola amphibius (Eurasian water vole): 119810225
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Entry
119810225 CDS
T08327
Symbol
Lingo1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119810225 (Lingo1)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119810225 (Lingo1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
119810225
NCBI-ProteinID:
XP_038179525
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All DBs
Position
3:complement(124735904..124751998)
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AA seq
620 aa
AA seq
DB search
MQVSERMLAGGMRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN
LRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIG
TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGN
LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
CRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
KSDAGISSADAPRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagcgagaggatgctggcggggggcatgagaagcatgcccagccccctcctg
gcctgctggcagcccatcctcctgctggtactgggctctgtactatcaggttctgccacg
ggctgcccgccccgctgcgagtgctcagcacaggaccgagcagtgctctgccaccgaaag
cgctttgtggcagtgcccgagggcatccccaccgagactcgtctgctggacctgggtaaa
aaccgcatcaagacgctcaaccaggacgagtttgccagcttcccacacctggaggaactg
gaactcaatgagaacatcgtgagcgccgtggaacccggcgccttcaacaacctcttcaac
cttcggacactggggctgcgcagcaaccgcctgaagctcatcccgttgggtgtcttcacc
ggcctcagcaacctgaccaagctggacatcagtgaaaacaagattgtcatcctgctggac
tacatgttccaagacctatacaacctcaagtcgctggaggtcggtgacaatgacctcgtc
tacatctcccatcgagctttcagcggcctcaacagcctggagcagctgactctggagaaa
tgcaatctgacctccatccccaccgaggcgctttcccacctgcatggcctcatcgtcctg
cggctacgacatctcaacatcaacgcaatcagggactactccttcaaaaggctgtaccga
ctcaaggtcttggagatctcccactggccctacctggacaccatgacccccaactgcctc
tacggcctcaacctgacatccctgtccatcacacactgcaacctgaccgcagtgccctat
ctggccgttcgccatctggtctatctccgcttcctcaatctttcctacaaccccattggt
actatcgagggctccatgctgcatgagctgctgcggttgcaggagatccagctggtgggt
gggcagctggccgtggtggagccctatgcctttcgtgggctcaactacctacgtgtgctc
aatgtctctggcaaccagctgaccaccttggaggagtcggccttccactcagtgggcaac
ctggagacgctcatcctggactccaaccccctggcctgtgactgccggctgctgtgggtc
ttccggcgccgctggcggctcaacttcaacaggcagcaacccacctgcgccacacccgag
ttcgtccagggcaaggagttcaaggactttccggacgttctcctacccaactacttcacc
tgccgcagggcccacatccgggaccgcaaggcgcagcaggtgtttgtagatgagggccac
acggtgcagtttgtgtgccgcgcggatggcgaccctccaccggccatcctttggctctca
ccccgcaagcacttggtctcagctaaaagcaatgggcggctcacagtcttccctgatggc
acgctggaggtgcgctacgcccaggtacaggacaacggcacgtacctgtgcatcgcagcc
aatgctggcggcaacgactccatgcccgcccacctgcatgtgcgcagctactcgcccgac
tggccccatcaacccaacaagacgttcgccttcatctccaaccagccaggcgagggagag
gccaacagcacccgcgccaccgtgcctttccctttcgacatcaagacgctcatcattgcc
accaccatgggcttcatctccttcctgggcgtagtcctcttctgcctggtgctgctgttt
ctctggagccggggcaaaggcaacacaaagcacaacatcgaaattgagtatgtgccccgg
aaatcggacgcaggcatcagctcggccgatgcaccccgcaagttcaacatgaagatgata
taa
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