KEGG   Arvicola amphibius (Eurasian water vole): 119810257
Entry
119810257         CDS       T08327                                 
Symbol
Wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04140  Autophagy - animal
aamp05014  Amyotrophic lateral sclerosis
aamp05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    119810257 (Wdr41)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    119810257 (Wdr41)
   05022 Pathways of neurodegeneration - multiple diseases
    119810257 (Wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aamp04131]
    119810257 (Wdr41)
Membrane trafficking [BR:aamp04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    119810257 (Wdr41)
SSDB
Motif
Pfam: Beta-prop_WDR41 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_C WD40_CDC20-Fz Beta-prop_EML_2 EIF3I ASA1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st PAC11 CFAP251_N Beta-prop_IP5PC_F Beta-prop_DCAF12 DSE1_N Beta-prop_NOL10_N Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 119810257
NCBI-ProteinID: XP_038179573
LinkDB
Position
3:complement(52698079..52736712)
AA seq 459 aa
MLRWLIGGGREPQGLAEKAALQTIGEDQSQNPYTELLVLSAHRDIVRFLVQLDDNRFASA
GDDGIIVVWNAQTGEKLLDLRGHTQKITAIIAFPPLDSCEQGHQLILTASADRTVGVWDC
DTGRQIQSVSCFQSTVKCLTVLQGLDVWLSGGNDLGVWNRKLDLLCKTNHLSDTGISALV
EIPRNCVVAAVGKELIIFRLVAPTEGLLEWDIIEVKRLPDHQDNILSLVTINDTSFVTGS
HVGELIIWDALDWTVQACERSFWNPSPQPDAQQEIKLCQKQNDISINHFTCDEENIFVAV
GRGLYVYNLQLKRVIACQKTAHDSTILHIDRLPNRQLISCSEDGSVRIWEVREKQQLAAE
PVPTGFFNMWGFGRVNKQASQPVKKQQENGTTCSLELIGDLIGHSSSVEMFLYFEEHGLV
TCSADHLIILWKNGERESGLRSIKLFQKLEEDGDLHPAV
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgctgcgctggctgatcgggggaggccgcgagccccagggcctggccgagaaagctgct
ttgcagacgataggagaagaccagagtcagaacccctacactgagctgctggtcctgagc
gcgcaccgggacattgtccggttcctggtgcagctggatgacaacagatttgcatctgct
ggcgatgatggcattatagttgtgtggaatgcccagacgggagaaaagctcctggatctc
agaggacacacccagaagatcacggccatcatcgcatttcccccgctcgactcttgtgag
cagggccatcagctcatcctgacagcctctgcagacaggaccgtcggtgtgtgggactgc
gacactggcagacagatccagagcgtctcctgcttccagtccaccgtgaagtgcttaact
gttcttcagggactagacgtttggctctcgggtggtaatgacttaggtgtgtggaaccga
aaattagatctgctgtgtaagaccaaccacctttctgatacagggatcagtgctttggtt
gaaatccctaggaactgtgttgtggcagcagttggcaaagaactgataatttttaggtta
gtagcacctacagaaggcttgctggaatgggacatcattgaagttaaacggcttcctgat
caccaggataatattctgtcactggttaccatcaatgatacaagtttcgtcaccggttcc
catgtcggagagctgatcatctgggatgccctggactggactgtgcaggcctgtgagcgt
agcttctggaacccgtctccacagcccgatgcccagcaagaaataaaactctgccaaaag
caaaatgacatttctattaatcatttcacatgtgatgaagagaacatatttgttgctgtt
ggaagggggctatacgtgtacaacctacagctgaagcgtgtgattgcctgccagaaaact
gcacatgactccaccatcctccatatcgacagacttcccaacagacagttaatctcatgc
tcagaagacggcagtgtgcgcatttgggaggtccgagagaaacagcagctggcggctgaa
cctgtcccaacagggttttttaatatgtggggctttggaagagtgaacaaacaagccagc
cagcctgttaagaagcagcaagaaaacggcactacgtgttccctggagctcattggagac
ttgattggccactcatcctctgtggagatgtttctatactttgaagagcatggactggtg
acatgttctgcagatcatctcattatcttgtggaaaaatggagagcgagaatctggactc
cgaagtataaagttatttcagaaactagaagaggatggtgacctacaccccgctgtctag

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