Arvicola amphibius (Eurasian water vole): 119810309
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Entry
119810309 CDS
T08327
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119810309
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119810309
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119810309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_11
zf-RING_Vps41
HIP1_clath_bdg
Fez1
Crescentin
GAS
zf_RING_Vps8
OVT1
zf-RING-like
BRE1
WEMBL
HMMR_N
zf-RING_16
zf_RING_Vps8_fungal
Zn_ribbon_8
DUF3450
RING_XB3-XBAT31
RINGv
FANCL_C
SAT
Tropomyosin
AAA_13
MscS_porin
Motif
Other DBs
NCBI-GeneID:
119810309
NCBI-ProteinID:
XP_038179649
LinkDB
All DBs
Position
3:174336654..174364258
Genome browser
AA seq
469 aa
AA seq
DB search
MPIRALCTICSDFFDHSRDVAAIHCGHTFHMQCLIQWFETAPSRTCPQCRIQVGKKAIIN
KLFFDLAQEEDSVLDAEFLKNELDSIRAQLSQKEREKRDSQAIIDTLRDTLEERNATVES
LQNALDKTEMLCSTLKKQMKFLEQQQDETKQAREEARRLKSKMKTMEQIELLLQSQRSEV
EEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARRASGELADKLKKDLASSRSKLKTVY
TELDQAKLELRSTQKDLQNADKEIASLRKKLTMLQGTLNLPPVTSETVSRLVLESPAPME
MLNPKLHRPSFGDEIDFNTTFDVDTPPSQTSSSQHRPKKPCLERARSPVQDVLKKIPKVS
RQEPQLSLGGQRCVGEPDEELAGAFPLFIRNAVLGQKQPNRTTAASRCSTDVVRIGFDGL
GGRTKFIQPTDTAIIRPMPVKPKARSKQKVRIKTGNSSSQPKLDTFLWQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgcgctctgtgcactatctgctccgacttcttcgatcattcccgcgacgtg
gctgccatccactgtggccacactttccacatgcagtgtctaatccagtggtttgagaca
gcaccaagtcggacctgcccacagtgtagaatccaggttggcaaaaaggctattatcaac
aaacttttctttgaccttgcccaggaagaggatagtgtcttggatgcagaattcttaaag
aatgaactggacagtattagagcccagctttcccagaaagagagggagaaacgggacagc
caggccattatcgacactctacgggacacattggaagaacgtaatgccactgtggagtcc
ctgcagaacgccttagacaaaacagagatgctgtgctccactcttaaaaaacagatgaag
ttccttgagcagcaacaggatgagaccaagcaagctcgggaggaggcccgccgactcaag
agcaagatgaaaaccatggagcaaattgagctcctactccagagccagcggtctgaggtg
gaggagatgatccgagacatgggtgtgggacagtcagcggtggagcagctggctgtgtac
tgcgtgtccctcaagaaagagtatgagaatctgaaagaagcacggagggcctcaggagag
ctggctgacaagttgaagaaggacctggcctcctctaggagcaagctgaagactgtctac
actgagctggatcaggccaagttagaactgaggtcaacccagaaggatttacagaatgct
gacaaggagatcgcgagcctaagaaagaagctaacgatgctacagggaaccttgaacctg
cctccagtgaccagtgagactgtcagccgcctggttttggagagcccagcccctatggag
atgctgaacccgaagctccaccggccatccttcggtgatgagattgatttcaatactacc
ttcgatgtagatacccctccaagccagacctccagctcccagcaccgccccaagaaaccc
tgcctggagagggcacgctcccccgtgcaggatgtcctcaagaagatacctaaagtctcc
aggcaggagccccagctctcactgggtggccagcgctgtgtaggagagccagacgaggaa
ctggctggtgccttccctctcttcatccggaatgctgtcctgggtcagaaacagcccaac
aggaccacagcagcttcccgttgcagcacagatgtggtaagaataggcttcgatggactt
ggaggacgaacaaaattcatccagcctacagacacagccattatccgaccaatgccggtt
aagcccaaggccaggagtaaacagaaagtgagaataaagactgggaattcttcctcccag
cccaagctggatacctttctgtggcagtga
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