Arvicola amphibius (Eurasian water vole): 119810312
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Entry
119810312 CDS
T08327
Symbol
Exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119810312 (Exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119810312 (Exosc7)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119810312 (Exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
119810312 (Exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119810312
NCBI-ProteinID:
XP_038179661
LinkDB
All DBs
Position
3:188503010..188528987
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AA seq
291 aa
AA seq
DB search
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSMD
LRSLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGAKDI
ELSDDPYDCIRLSVENVPCIVTLCKIGCRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMESSKRVGKVLHMSLQSVLHKEESLGPERPKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtggcgctgagcgaggctgagaaggtctacatcgttcatggagtgcaggaa
gacctccgggtggatggccgtggctgtgaggactaccgctgtgtggaagtggagacggac
gtcgtgtccaacaccagtgggtctgccagagtcaagctgggtcatacagacatcttggtg
ggagtgaaagcagaaatggggacaccgaagctggagaagccaaatgaaggctacctggaa
ttctttgttgactgttcagccaatgctaccccagaatttgaagggcgaggaggtgacgac
cttggcaccgagatcgctaacaccctgtaccggatcttcaacaacaagagcagcatggac
ctgaggtccctctgcatcagtcctcgggagcactgctgggtcctctatgtggatgtgctg
ctcctggaatgtggtgggaatttgtttgatgctatttccattgctgtgaaggctgctctc
ttcaatacaaggataccaagggttcgcgttctggaggatgaagagggggcaaaggacatt
gaactgtctgacgatccttatgactgcatccgactgagtgtagagaatgtcccctgtatc
gtcaccctgtgcaagattggctgccgacatgtggtagatgccacacttcaagaggaagcc
tgctccttggccagtttgctagtgtcagtgaccagcaagggagtcgtgacatgcatgagg
aaagtgggcaagggaagcctggatcctgagagcatctttgaaatgatggagagcagcaag
cgagtgggcaaggtgctgcacatgtccttgcagagcgttctgcacaaggaagaaagcctg
gggcccgagaggccgaaggtcgggttcctgggatga
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