Arvicola amphibius (Eurasian water vole): 119810461
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Entry
119810461 CDS
T08327
Symbol
Sema3f
Name
(RefSeq) semaphorin-3F isoform X1
KO
K06840
semaphorin 3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
119810461 (Sema3f)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
PSI
I-set
ig
Ig_2
Ig_6
V-set
Motif
Other DBs
NCBI-GeneID:
119810461
NCBI-ProteinID:
XP_038179862
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Position
3:complement(174029399..174056768)
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AA seq
785 aa
AA seq
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MLRTGLILWASLLTGAWPAAPIQDQVPATPRVRLSFKELKATGTAHFFNFLLNTTDYRIL
LKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASPQRIEECILSGKDGNGECGNFVR
LIQPWNRTHLYVCGTGAYNPMCTYVNRGRRAQAPPWTQMQVVRGRGSRATDGANRPTPTA
PRQDYIFYLEPERLESGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQ
TAMRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQNPAVYARIGRIC
LNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQDVFVQQTQDVRNPVIYAVFT
SSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPS
MKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTVAVDQVDAADGRYEV
LFLGTDRGTVQKVIVLPKDDQEVEELMLEEVEVFKEPAAVKTMTISSKRQQLYVASAVGV
THLSLHRCQAYGAACADCCLARDPYCAWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRG
FNSNANKNAIESVQYGVAGSAAFLECQPRSPQATVKWLFQRDPSDRRREIRAEDRFLRTE
QGLLLRALQLGDRGLYSCTATENNFKHIVTRVQLHVLGQDAVHAALFPPLAVSVPPPPGA
GLPTPPYQELAQLLAQPEVGLIHQYCQGYWRHVPPNPREAPGALRPPEPQDQKKPRNRRH
HPPDT
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcactggcctcatcctgtgggcttccctgctgaccggggcctggcctgccgcc
cccatccaggaccaggttcccgccacacctcgcgtccgtctgtcattcaaagaacttaag
gccacgggtactgcccacttcttcaacttcctgctcaatactacggactacagaatcctg
ctcaaggacgaggaccatgaccgcatgtacgtgggcagcaaggactacgtgctgtccctg
gacctgcatgacatcaaccgagagcccctcattatccactgggcagcctcgccacagcgc
attgaggagtgcatactgtcaggcaaggatggcaacggagagtgtgggaatttcgtcagg
ctcatccagccctggaaccgaacacacctgtatgtgtgcgggaccggtgcctacaacccc
atgtgcacctatgtgaaccgtggccgtcgtgcacaggccccgccatggacccagatgcag
gtggtcagaggccgaggcagcagggccacagatggtgccaaccgcccgacgcccacagcc
ccacgccaggattacatcttctacttggagcctgagagactggagtcagggaagggcaaa
tgtccatacgaccccaagctggacacagcctcagcccttatcaatgaggagctctatgca
ggagtgtacatcgattttatgggcactgatgcagccatcttccgcacgcttggaaaacag
acggccatgcgcactgatcagtacaactcccggtggctcaatgacccttcatttatacat
gctgagctcatccctgacagcgcggagcggaacgatgacaaactctacttcttcttccga
gagcgctctgcagaggctccacagaaccccgctgtatatgcccgcatcgggcgcatctgt
ctcaatgatgatggcggccattgctgcctcgtcaacaagtggagcacattcctgaaggcg
cggctcgtctgctcggtgccaggggaggatggcatcgagacccacttcgatgaactccag
gatgtgtttgtccagcagacccaggatgtcaggaaccccgtcatttatgctgtctttacc
tcctcaggctccgtgttccgaggctctgctgtgtgcgtctactccatggctgacatccgt
atggtcttcaatgggccctttgctcacaaggagggccccaactaccagtggatgcccttc
tcagggaagatgccatatccccggcctggcacatgccctggcggaacctttacgccgtca
atgaagtccactaaggattatcctgacgaagtcatcaacttcatgcgcagtcatccgctc
atgtaccaggctgtatacccgctgcagcggcgacccctggtggtccgtacaggtgcaccc
taccgcctcaccaccgtcgctgtggaccaggtggatgcagctgatgggcgctatgaggtg
cttttcctgggcacagaccgcgggacagtgcagaaggtcattgtgctgcccaaggatgac
caggaggtggaggagctcatgctggaggaagtggaggtcttcaaggaaccagcagccgtg
aagactatgaccatctcttccaagaggcaacaactctatgtggcctcagccgtgggtgtc
acacacctgagcctgcaccgctgccaggcatatggagctgcctgtgctgactgctgcctc
gcccgcgatccctactgtgcctgggatggccaggcctgctcccgctacacagcatcctcc
aagaggcggagtcgccggcaagatgtccgccacgggaaccccatcaggcagtgccgtggg
ttcaattccaatgcaaacaagaatgccatagagtctgtgcagtatggagtggccggcagc
gcggctttccttgagtgccagcctcgctcaccccaagccactgtgaagtggctgttccag
cgagatcccagtgaccggcgccgtgagattcgtgcagaggaccgcttcctgcgtacagag
caggggctgctgcttcgcgccctgcagcttggtgaccgcggcctctactcctgcacggcc
actgagaacaacttcaagcacatcgtcactcgggtgcagctgcatgtactgggccaggac
gccgttcatgctgccctcttccccccactggctgtgagcgtccctccacctcctggtgca
ggtctccccacacctccttatcaggagctggcccagctcctcgcccagccggaagtgggc
ctcatccatcagtactgccaggggtactggcgtcatgtgccccccaaccccagggaggct
ccaggagctcttagacctcctgaaccccaggaccagaaaaagccccggaaccgtcgtcat
caccctccggacacatga
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