Arvicola amphibius (Eurasian water vole): 119810578
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Entry
119810578 CDS
T08327
Symbol
Fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03460
Fanconi anemia pathway
aamp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119810578 (Fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
119810578 (Fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119810578 (Fancl)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119810578 (Fancl)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119810578 (Fancl)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119810578 (Fancl)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
119810578 (Fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
PHD_NSD
zf-RING-like
zf-HC5HC2H
DUF3861
Cys_rich_CPXG
Motif
Other DBs
NCBI-GeneID:
119810578
NCBI-ProteinID:
XP_038180041
LinkDB
All DBs
Position
1:88370506..88443494
Genome browser
AA seq
375 aa
AA seq
DB search
MAETDANLLRHFPLLLPQNREKTAYEGFISAQGSDFHLRIVLPKDRQLKNARLLFSWQLK
NILNEYRQIVQQRLKQSPDLVSFMMELKMLLEVALKNRQELCIRPASRSFCTDLLNEIGA
VGWDKLVCVDTSFSTIKLKAEDASGRKHLITVKLKAKYPVEPPECVVDFPVPFSLSWTPQ
SSLVNVHSQFLAALDSLKAFWDVMDEIDEKTWVLEPEKPPRSATARRIALGHNVSINIEV
DPRHPTMLPEFCFLGADHVIKPLGIKLSGNIHLWDPENSLLQNLKDVLEIDFPARTVLEG
SDFTMDCGICYAHHLNGAIPDQVCDNPQCGQPFHQMCLYEWLRGLSTSRQSFNVLFGDCP
YCSKPITLKMSVRKP
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacagacgctaacctgttgcgccactttccgctgctgcttcctcagaaccgg
gagaaaacagcgtatgagggattcatttcggctcagggaagcgactttcaccttagaata
gtgctgcctaaagatcggcaactgaagaatgcaagattactgtttagctggcaactgaaa
aatatacttaatgaataccgtcagatagtccaacaaagattgaagcagtctcctgatcta
gtgagctttatgatggagttgaagatgcttttggaagttgctttaaagaatcgacaagag
ttgtgtatacgaccagcttctcgcagtttctgcacagaccttcttaatgagataggagct
gtcggctgggataagcttgtgtgtgtggatacttccttcagcaccatcaagttaaaagca
gaagatgcttctggtagaaagcatctgatcactgtcaagttgaaggcgaagtaccctgta
gagccaccagaatgtgttgtggactttccagttccattttctctttcctggacaccacag
agctccttggtaaatgtccacagtcagttcctggcggcactggactcactcaaggcattc
tgggacgttatggatgagattgatgagaagacctgggttctggaaccagaaaaacctcct
cggagtgcaacagcacgcaggattgcattggggcataatgtatccatcaacatagaggta
gaccccaggcaccctaccatgcttcctgagttctgctttcttggagctgatcacgtgata
aaacccctgggaatcaagctgagtgggaacatacatttatgggatccagaaaatagtctg
ttacaaaatttgaaagatgttttagaaattgactttccagctcgtactgtcttggaagga
tctgactttactatggactgtgggatctgttatgcccatcaccttaatggtgccattcct
gatcaagtgtgtgataatccccagtgtggacagcctttccatcaaatgtgcttgtatgag
tggctgagggggctgagcaccagcagacagagcttcaacgtcctctttggtgactgtccc
tattgtagtaagccaattaccttgaaaatgtctgtgagaaaaccctga
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