Arvicola amphibius (Eurasian water vole): 119810653
Help
Entry
119810653 CDS
T08327
Symbol
Rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119810653 (Rnf180)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119810653 (Rnf180)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119810653 (Rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
119810653
NCBI-ProteinID:
XP_038180165
LinkDB
All DBs
Position
3:42853964..42998062
Genome browser
AA seq
592 aa
AA seq
DB search
MKRSKESTAKQTSDDQAGTLRCWKCRRCVASSACLMNCLENQVIEDRHESVDAPRTCRLW
HMNVESLPEWINRLIQKAQWTVGKLNCPFCGARLGGFNFVSTPKCSCGQLAAVHLCKSRT
DHQPAPAGNLMRPALEYLSHPGVQAGCDKETLVTGGGSKIRNHRLFNMTRNNNGLGRLTE
ALCLEVRATYFEMKNEKLLFKAPDPKYQPFVPQRAAGRRSSRASHRKSQSLDLNINEKLP
LLPTLYETHSKTTTYPRLNETQPIDLSALALPCSRSDCSFQNPPSFDPNLLLHRLSVAPH
ETQAQRGREFQCGLEASSLYSDHANANSLTFLMDLPSSGRSVLDASDQEEHLSPLDFLRS
ASFPLGTINHRLNSRERSKLRTLRRQRRRHERWLQKQGKYSGVGLLDHMTLSNEMSTDDE
NECTEEKDSYICAVCLDVYFNPYMCYPCRHIFCEPCLRTLAKDNPASTPCPLCRTIISRV
FFQTELNNATKTFFTKEYLKIKQSFQKSSSAKWPLPSCRKGFHLFGGFHRHAAPVTRRQF
PHGAHRMDYLHFEDDSRGWWFDMDMVIIYIYSVNWVIGFVVFCFLCYFFFPF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaagcaaagagtcaacggccaaacaaaccagtgacgatcaagcaggtactctt
cgttgttggaaatgtagaagatgtgttgcaagttctgcctgcctcatgaattgccttgag
aatcaagtgattgaggacagacatgagtcggttgacgccccacgcacttgtcgtctgtgg
cacatgaatgtagagagccttccggagtggataaaccgcctaatacagaaggcccagtgg
acagttgggaaactgaattgtcctttctgtggggcccgcttagggggctttaattttgtc
agcactccaaaatgttcctgtggccagcttgcagctgtacatctctgcaagagccggact
gatcaccaaccagcaccggcgggcaacctaatgaggccagcgctcgaatacttgtctcat
cccggagtccaggcaggttgtgataaggagactctggtgacaggtggtggctccaaaatc
agaaaccacaggcttttcaacatgacccgaaacaataacggccttggaagactaacagaa
gccctctgcctggaggtgcgagcgacatattttgagatgaagaatgagaaactgctcttc
aaagccccggacccaaaataccagccttttgttcctcagagagcggctggcaggcgctct
tccagagcttctcatagaaagtcacagagtttggacctgaacatcaatgagaagctgcct
ttgttacccactttatatgaaacccatagtaagactactacctatcccaggctaaatgaa
acacagcccattgacctctcggccttggctttgccgtgtagtagaagcgactgttccttt
caaaacccacccagttttgatcctaatctgctgctgcacagactttccgtggctccccat
gagacccaggcacaaagaggaagagaatttcagtgtggcctagaagcttcttccctatac
tctgatcatgctaatgctaacagcctgacattcctgatggatctgccctcatcggggagg
agcgtgctggatgcctcagaccaagaagaacacctctcccctctggactttctgcgctcg
gccagtttccccttgggcaccattaaccacaggctgaatagcagagagaggagcaagctg
aggactctaagaaggcaacggaggaggcatgagagatggctccagaagcagggtaaatac
tcaggagtggggttgctggatcatatgaccttgagtaatgagatgagcacagatgatgag
aatgagtgcacagaggaaaaggacagctacatctgcgccgtgtgcttggatgtgtacttc
aacccctacatgtgctacccttgccgtcacatcttctgcgagccctgccttcggactctg
gccaaagacaaccccgcaagcactccctgcccactctgccggaccatcatctctagagtc
tttttccagacagaactgaacaatgccacaaagaccttcttcaccaaggaatatttgaaa
ataaaacaaagctttcagaaatccagttctgccaagtggcccctgccaagctgtaggaaa
ggattccatcttttcggaggattccacaggcatgcagctccagtgacacggaggcagttc
ccacacggggcgcacaggatggactacctgcacttcgaggacgatagccgtggatggtgg
tttgacatggatatggtgatcatctacatttactccgtgaactgggtcattggattcgtt
gttttctgcttcctttgctattttttctttccgttttag
DBGET
integrated database retrieval system
