KEGG   Arvicola amphibius (Eurasian water vole): 119810991
Entry
119810991         CDS       T08327                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119810991 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aamp03041]
    119810991 (Sf3a1)
Spliceosome [BR:aamp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    119810991 (Sf3a1)
 Complex B
    119810991 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    119810991 (Sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 119810991
NCBI-ProteinID: XP_038180479
LinkDB
Position
1:68296369..68319009
AA seq 793 aa
MPAGPVQAVPPPPPVATEPKQPVEEEATSKEESTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFAKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPAAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPPSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQGLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMASGAV
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcctccgccgcctccagtagctactgagcccaaa
cagccagttgaagaagaagcaacatcaaaggaggaatccactccttccaagccagtggta
gggattatttaccctcctccagaggtcaggaatatcgttgacaagactgccagttttgtg
gccagaaatgggcctgaatttgaagccaggatccgacagaatgagatcaacaaccccaag
ttcaacttcttaaatcccaatgacccttaccatgcctactaccgccacaaggtcagcgag
tttaaggaggggaaggctcaggaaccctcagctgccatccccaaggttatgcagcagcag
cagcaagccacccaacaacagctgccccagaaggtccaagcccaggtgatccaagagacc
atagtaccgaaggaaccccctcctgagtttgaattcatcgctgatcccccttccatctca
gccttcgacctggatgtagtgaagctgacagctcagtttgtggccaggaatgggcgccag
tttctgactcagctgatgcagaaagagcagcgcaactatcagtttgactttctccgtccg
cagcacagcctcttcaactacttcacaaagctggtggagcagtatacaaagatcttgatt
ccacccaaaggcttatttgcaaagctcaagaaagaggctgaaaacccccgagaagttttg
gaccaggtgtgttaccgagtggaatgggccaaattccaggaacgtgagaggaagaaggaa
gaagaagagaaagagaaggaacgagtggcctatgctcagatcgactggcatgattttgta
gtggtggagacagtggatttccaacccaatgagcaaggaaacttcccacccccaacaaca
ccagaggaactgggagcccgaatcctcattcaagagcgctatgagaagtttggggaaagt
gaggaggtggagatggaagttgagtctgatgaggaggatgagaagcaggaaaaggctgaa
gagcctccttcccagctggaccaggatactcaagtacaggacatggacgagggttcagat
gatgaagaagaaggacagaaagtgcctccacccccagagacacccatgcctccacctctg
cccccaactccagaccaagtcattgtgcgaaaggactatgatcctaaagcttccaagccc
cttcctccagctcctgctcctgatgagtatcttgtatcccccatcactggggagaagatt
cctgccagcaaaatgcaagaacacatgcgtattgggcttcttgatccccgttggctggag
cagcgagatcgctccatccgagagaaacagagtgatgatgaggtctatgcaccaggtctg
gatattgagagcagcttaaagcagttggctgagcgccgtactgacatctttggggtagaa
gaaacagctattggtaagaagattggtgaagaggagatccagaagccagaggaaaaggtg
acttgggatggccattcaggtagcatggcccggacccagcaggctgcccaggccaacatc
accctccaggagcagattgaggccatccataaggctaagggcctggtgccagaagacgac
actaaggagaaaattggccctagcaagcccaatgaaattccccagcaaccaccacctcca
tcttcagccaccaacatccccagctcagcacccccgatcacatcagtgccccggccacct
gcaatgccgcctccagttcgtaccactgttgtgtctgcagtacctgtcatgccccggcca
cccatggcatctgtggtccggctgcctccaggctcagtgatcgccccaatgccacccatc
atccatgcacccaggatcaatgtggtacctatgcctcctgctgcacctcccatcatggca
ccccgcccacctcccatgattgtgccaacagcctttgtgcctgccccacctgtggctcca
gtcccagccccagcaccaatgcctcctgtacaccccccacctcctatggaagatgagcct
ccatccaagaaactaaagactgaggacagcctcatgcctgaggaagagttcctgcgcagg
aacaagggtccagtgtccatcaaagtgcaggtacccaacatgcaggataagacagaatgg
aagctgaatggacagggactggtctttactctcccactcacagaccaggtttctgtcatc
aaagtgaagattcatgaagccacaggcatgcctgcagggaaacaaaaactacaatatgaa
ggcatcttcatcaaggattccaactccctggcttactacaacatggccagtggtgctgtc
atccacttagccctcaaggagagaggtggcaggaagaagtaa

DBGET integrated database retrieval system