Arvicola amphibius (Eurasian water vole): 119811019
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Entry
119811019 CDS
T08327
Symbol
Sec24a
Name
(RefSeq) protein transport protein Sec24A
KO
K14007
protein transport protein SEC24
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119811019 (Sec24a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119811019 (Sec24a)
Membrane trafficking [BR:
aamp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119811019 (Sec24a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Sen15
Motif
Other DBs
NCBI-GeneID:
119811019
NCBI-ProteinID:
XP_038180493
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All DBs
Position
4:69138116..69202378
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AA seq
1082 aa
AA seq
DB search
MAQPGIPAARGAAARLQAQNGAASASGSPYTNGPVQNTSQVSSSQGYDSQLPGSYLRPMP
AKTLNPFSAHSNYGGSQGSGQTLNRPLVASSPVPPSLHGGPVPRVPLPASQNPAATPMPS
GSFLPGANPPPPLNWQYNYPSTGPQTNHFPHVAQPTISGNTNLTADHQYVSPGDPALQTS
FVKPGSALPLQSPPLPTAFQPGAPPGPPPTGGPPSQKAPPRAALLPSLNSTVNQEGITSN
ANSGSMVAHSTYDEIEGGGFLATPQLINQNPKTSRSVGYAYPSLPPGYQNAAPPSAAGMP
PSSLNYPSGPQAFTQTPLGANHLTASMSGLSLHPEGLRVVNLLQERNMLPSTPLQPPVPN
LHEDIQKLNCSPELFRCTLTGVPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRC
RSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFMYNPLTRVYGEPHRRPEVQNATIEFM
APSEYMLRPPQPPVYLFVFDVSHNAIETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDS
TIHFYSLQEGLSQPQMLIVSDIDDVFIPMPENLLVNLNESKELVQDLLKSLPQMFTKTLE
TQSALGPALQAAFKLISPTGGRMSVFQTQLPTLGVGALKPREEPNPRSSAKEIHLTPSTD
FYKKLALDCSGQQAAVDLFLLSGQYSDLASLGCVSRYSAGSVYYYPSYHHQHNPVQVQKF
QKELQRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSV
EESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMA
VDRSVTASLSDARDALVNAVIDSLSAYRSSVLSSQQPGLMVPFSLRLFPLFVLALLKQKS
FQTGTNARLDERIFAMCQVKNQPLVHLMLTTHPSLYRVDNLSDEGALNINDRTIPQPPIL
QLSVEKLSRDGAFLMDAGSVLMLWVGRNCAQNFLSQVLGVQNYASIPQKMTDLPELDTPE
SARTIAFISWLREQRPFFPILYVIREESPMKAAFLQNLVEDRTESALSYYEFLLHVQQQV
NK
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcccgggatcccggctgcccgcggcgccgcagcccgtctccaggcccagaac
ggggccgcctcggcctcagggtctccctacaccaacggtcctgtccaaaatacatcacaa
gtgtcatcaagccaaggatatgattcccagcttccaggatcctaccttcgtccaatgcca
gcaaagactttgaatccattctctgcacattcaaactatggtggttctcagggatctggg
cagactcttaatagaccacttgtggcttccagtccagtaccaccttcacttcatggtggt
cctgttccccgagtgccactacctgcttctcagaacccagctgctacaccaatgccttct
ggtagctttcttcctggagccaacccaccaccacctctgaattggcaatataattatcca
tctacaggaccacagactaaccattttcctcatgtagctcaaccaactatatctggtaat
acaaatttaacagcagaccatcagtatgtttctcctggagaccctgcacttcaaaccagc
ttcgtcaagccaggttctgcacttcccttacagagtccacctctgcccactgcttttcag
ccgggagctcctcctgggccccctcccactggaggtccaccctcccagaaagcacctcct
cgggctgcactcctaccttcattgaattcaactgtcaaccaagagggtattacatcaaat
gccaatagtggatctatggtggctcatagtacttacgatgaaattgaaggaggtggcttc
ttggcaacaccacagcttattaatcagaaccccaaaacaagccgaagtgtgggatatgca
tacccctccctaccacctggctaccagaacgcagcgccacctagtgcagctggaatgcca
ccctcctccttgaattacccaagtggccctcaggcctttactcagactcccttaggtgct
aatcatttaactgcaagcatgagtggattaagtctacatccagagggtctaagagttgtc
aatcttcttcaagaaagaaacatgcttccctcgacacctttgcagcctccagttccgaat
ttgcatgaagacatccagaaactcaactgtagcccagagttatttcgatgcacactgacg
ggcgtccctcagactcaggccttactgaataaagccaagcttcctttggggctgctgctc
caccctttcaaagaccttgtgcaattgcctgtggtgacctccagcacaattgtgcgatgc
cgctcatgcaggacttacatcaacccttttgtcagctttcttgatcaaagaaggtggaag
tgtaacttatgttatcgagtcaatgatgttcctgaggaattcatgtacaaccctttaacc
agagtttatggagaacctcacagaagacctgaagttcagaacgctactattgagtttatg
gctccttcagagtacatgttacgaccaccacaacctccagtgtacctctttgtgtttgac
gtatctcacaacgcaatagaaactggatacttgaattcggtttgccagagtttgttagac
aatctggatctgcttcctggaaacactaggacaaaaattggcttcataacatttgatagc
actatccatttctacagtcttcaggaaggtctctcccagcctcagatgctaatagtttct
gatattgatgatgtttttatacctatgccagagaacttactagtaaacttaaatgaaagt
aaagagcttgtccaagatttactgaaaagcttgccacagatgtttaccaagacgctggag
acccagagtgctttgggtcctgcccttcaggctgcatttaagttaatatcaccaactggt
ggtcgaatgtctgtcttccaaacacaactcccaactcttggcgtgggagccctgaaacca
cgagaggaacccaacccaaggtcatctgctaaggaaatacacctgacaccgtctactgac
ttctataagaaattagccttggattgttctggacagcaggcagctgttgacttattcctt
ctcagtggacagtattctgatttggcctctctaggctgtgtctctcggtactcagcaggc
agtgtttactactacccctcgtaccaccaccagcacaatccagtccaagtgcagaagttc
cagaaggaactacagagatacctcactcggaagattggctttgaggcagtcatgaggatc
cggtgcaccaaaggtctttccattcatactttccatgggaacttcttcgtccgttctaca
gacttactttctcttcccaacgtcaacccagacgctggttacgcagtgcagatgtcagta
gaggagagcctgactgacactcagctagtttccttccagtcggcactcttgtacacatca
agtaaaggtgaaagaagaatccgtgtccatacgttgtgtttgccagtcgtttccacccta
aatgacgtcttccttggagctgatgttcaagcgatttcaggattactggccaatatggct
gttgataggtcagtgactgccagcctgagtgatgctcgggatgctttggtgaatgccgtc
atcgactctctttcggcttaccgctcttcagtcctgagcagccagcagccaggcctcatg
gttcctttctctttgaggcttttcccactttttgtgttggctctccttaaacagaagtct
ttccagactgggacaaatgcacgtctggatgaacgaatttttgccatgtgtcaagtgaaa
aaccagccgttggttcaccttatgctcacaacacaccccagtttgtacagagttgacaac
ctctcggatgagggagctctcaacatcaatgacaggaccatacctcagccccctattctt
cagctctcggtggagaagttgagcagagatggagctttcctcatggatgcaggctcggta
ctgatgctttgggttggaagaaattgtgcacagaattttctcagccaagttctgggagtt
caaaactatgcatcaattccacagaagatgacagaccttcccgaacttgatacgccagaa
tctgccagaacaatagctttcatctcgtggcttagagaacagaggccatttttcccaata
ctctatgtaatcagggaggagagtccaatgaaagcagccttccttcagaacctggtagaa
gacagaacggaatctgcgctgtcatattatgaattcctcctgcacgtacagcagcaggtg
aacaagtga
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