Arvicola amphibius (Eurasian water vole): 119811084
Help
Entry
119811084 CDS
T08327
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04064
NF-kappa B signaling pathway
aamp04622
RIG-I-like receptor signaling pathway
aamp05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
119811084
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119811084
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
119811084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119811084
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119811084
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119811084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
EGF_integrin
PRY
DCR
zf-Nse
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
119811084
NCBI-ProteinID:
XP_038180581
LinkDB
All DBs
Position
4:complement(6447245..6454900)
Genome browser
AA seq
598 aa
AA seq
DB search
MQKVSRPVQDQAPPQLSSQPSKVSQIQLLTSSNSSQHMLEDQVLCPICLEVFRNPVTTAC
GHNFCMICLQSFWDHLAAAGETYYCPQCRETFPTRPHLCKNVILGEMVACFTQAKSQTSG
PLWNLAGPTDVPCDFCSSQKLRSVKSCLQCMASLCEKHLRSHFEDQLFQDHQLLEPVWDL
KNRLCRKHRKLRQLYCRTEGSCVCGTCLLEEHKNHDTTPLEDERAHKKVEVRKIQANVEN
QMPIVTSDSQKHHGRVSFLSKLIQTMRDEVNNCFSEILHEIKQLQIKVLEFVEKEEAAAL
GKLGSSIQQSHNRLLTLEGDSVWLQSLLTNRSDEQFLQEFPRLKHYPACMEPLMGTSCEE
MHCFLQLPETLAQLRTRLLDIGLSFVNQLLLKGIKMNAYEVLPSAVDRKTLLQSYCNLNF
DPATASEELFLFKETNSVLNLGILLEPSTTNSPLPGFKQWPQVLCCPGLSEGCHYWEAEV
SNSWMCLGVTYRHCPPLGSRPRRNIVYLLGRNPYSWCLEWDSLKFSVWHNNTQTVLHGSY
HHTLGVALDFGAGCLSFYGVTGGMSLLYRFLTSFLEPLYPAVMVSSGASLTLKQYPEA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagtctcacggccagtccaggaccaagctcccccacagctctcttcccagccc
tccaaagtgtctcaaatccagctcctgacgagcagcaacagcagccaacacatgctggag
gaccaagtcctctgtcccatttgcctggaggttttccgaaatcccgtcaccaccgcctgt
ggccataacttctgcatgatttgcctccagagtttctgggaccacctggctgccgctggg
gagacgtactattgcccccagtgcagagagacctttcccaccaggccccacctctgcaag
aatgtcatccttggggagatggtggcttgcttcacacaggccaagagccaaacctcaggg
cccctgtggaacctggctggccccacagacgtgccctgtgacttctgctcctcgcagaag
ctgaggtcagtcaagtcatgcctgcaatgcatggcttccttgtgcgagaagcacctgcgc
agccactttgaggaccagctgttccaggaccaccagctgctggagcctgtgtgggacctc
aagaaccgcttgtgccgcaaacaccgcaagctccggcagttatactgccgcaccgagggc
agctgcgtgtgcggaacctgcctgctggaggagcacaagaaccatgacaccaccccgctg
gaggatgaacgggcccacaagaaggtggaagttcggaagattcaggccaatgtggagaac
cagatgccaatcgtcacctctgacagccagaagcaccacggacgagtaagctttctctcg
aaactgatccagacaatgcgagatgaggtgaacaactgcttctcagagatccttcatgag
attaaacagctgcagataaaggtcttggagtttgtggagaaagaggaggcggctgccttg
ggaaagctgggcagctctatccagcaaagccacaaccggctcctgacgttggagggggac
agcgtctggctccagagcctgctcaccaacaggagcgacgagcagttcctgcaggagttc
cccagactgaagcactaccctgcctgcatggaacccttgatgggcaccagctgtgaggag
atgcattgcttccttcagctgccagagactctggcccagctccgcacccggctgttggac
ataggcctcagcttcgtcaaccagctgctcttgaagggcatcaagatgaacgcctatgag
gtgctaccctcagctgtggacaggaaaacactactccagagttactgcaacctgaacttc
gaccctgccacagccagcgaggagctcttcttgttcaaggaaacgaactcggtgttgaac
ttgggcatccttctggaaccctcgaccaccaacagccctttaccaggcttcaagcagtgg
ccccaggtgctgtgctgccccggcctgtcggagggttgtcactactgggaggccgaggtg
tccaactcgtggatgtgcctgggtgtcacgtaccgccactgccctccgctgggcagccgt
ccccgtcgcaacatcgtctacctgctgggccgcaacccctactcgtggtgtctagagtgg
gactcgctcaagttctcggtgtggcacaacaacacgcagacggtgctgcacggctcctac
caccacacgctcggcgtggcgctggacttcggcgccggctgcctgtccttctatggggtg
acgggtggcatgagcctcctttatcgcttcctcacctccttcctcgagcctctgtacccc
gcggtcatggtcagcagcggagcctcgctcacactcaagcagtaccccgaggcatag
DBGET
integrated database retrieval system
