Arvicola amphibius (Eurasian water vole): 119811096
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Entry
119811096 CDS
T08327
Symbol
Shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp00260
Glycine, serine and threonine metabolism
aamp00630
Glyoxylate and dicarboxylate metabolism
aamp00670
One carbon pool by folate
aamp01100
Metabolic pathways
aamp01200
Carbon metabolism
aamp01230
Biosynthesis of amino acids
aamp01240
Biosynthesis of cofactors
aamp01523
Antifolate resistance
aamp04981
Folate transport and metabolism
Module
aamp_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
119811096 (Shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
119811096 (Shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
119811096 (Shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
119811096 (Shmt1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
119811096 (Shmt1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
119811096 (Shmt1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
119811096
NCBI-ProteinID:
XP_038180600
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All DBs
Position
4:60203306..60223442
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AA seq
475 aa
AA seq
DB search
MDITLWSSHEKMLTQPLKDSDAEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCL
NNKYSEGYPGQRYYGGTEFIDELETLCQKRALQAYHLDPQCWGVNVQPYSGSPANFAVYT
ALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVHPDTGYINYDQLEEN
ASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFEHCH
VVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKEIHYELESLINSAVFPGLQGGPHNHAI
AGVAVALKQAMTTEFKIYQLQVVANCRALSEALTDLGYKIVTGGSDNHLILVDLRSKGTD
GGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGI
ELTLKIQSDMPGRATLKEFKEKLAGDEKYQSALRTLREDVESFASNFLLPGLPDF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaccctgtggtcgtctcacgagaagatgttgacacaacccctcaaggacagt
gatgccgaggtttacaacattattaaaaaagagagcaaccggcagagggttggattggag
ctgattgcctcggagaatttcgccagcagagctgtgttggaggccctgggatcttgctta
aataacaaatactctgaggggtatccaggccaaaggtattacggtgggaccgagttcatt
gatgagctagagacactgtgtcagaagcgtgctttgcaggcctatcatctggatcctcag
tgctggggagtcaatgtccagccttattcaggctcccctgcaaacttcgctgtgtatact
gccctggtagagccccatgggcgaatcatgggcttggacctgccagatggaggtcatttg
actcatggcttcatgacagacaagaagaagatctctgctacatctatcttctttgaatct
atgccttataaggtacacccagacactggctacatcaactatgaccagctggaggagaat
gccagcctctttcacccgaagctaatcatcgcagggaccagctgctactctcggaacctg
gactatgcgcgtctgcggaagattgctgatgacaatggggcgtatctcatggcagacatg
gcacacatcagtgggctggtggcagctggcgtggtaccctctccttttgaacactgccat
gttgtgaccaccacaacgcacaaaaccctgagaggctgccgtgctggtatgatattctac
agaaagggtgtacgcagtgtggatcccaagactggcaaagagattcattatgaactggag
tcactcatcaattctgctgtgttcccaggcctccagggggggccccacaaccatgccatt
gctggtgttgctgtggccctgaagcaagccatgaccacagaattcaaaatctaccagctc
caagtggtggccaactgcagggctctgtctgaggccctcacagacctaggctacaaaata
gtcacaggtggttctgataatcatttgatcctagtggatctccgttctaagggtaccgat
ggtggaagggctgagaaggtactagaagcctgttctattgcatgcaacaagaatacctgc
ccaggtgacaagagcgcattacggcccagtggactgcgactggggaccccagcattgaca
tcccgtggacttttggaggaagacttccagaaagttgcacactttatccacagagggata
gagctgactctgaagattcagagcgacatgcccgggagggccacactgaaagagttcaag
gagaagctggcgggagatgagaagtaccagagtgctctgaggactctccgggaagacgtg
gagagttttgcttccaacttcttactccctggcttgcccgacttctga
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