Arvicola amphibius (Eurasian water vole): 119811149
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Entry
119811149 CDS
T08327
Symbol
Pkd1l1
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamp03037
]
119811149 (Pkd1l1)
04040 Ion channels [BR:
aamp04040
]
119811149 (Pkd1l1)
Cilium and associated proteins [BR:
aamp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119811149 (Pkd1l1)
Ion channels [BR:
aamp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119811149 (Pkd1l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PKD_4
PLAT
GPS
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119811149
NCBI-ProteinID:
XP_041911012
LinkDB
All DBs
Position
1
Genome browser
AA seq
3042 aa
AA seq
DB search
MQQAYDSMSLPSVMIRSIGNSTSPRFCLRWLCQSERAHASFSGLQQGALCSPKKGVLCCK
ELCSAEDLSKKLLLRSVTXEVPTRVVTATQTRTQAALWHPTGPIPVKQPENTGHFAINYF
PDTDAQAPPALGIRVHPASGTLLRLLVDFGDGCRAEMRLCTMTGAAAVTSCHRYRKEGVY
KLRAVVHDVHGADVELGPYYVNIGHENVSVFMNSSSTHEGEALSFADFLPLQKGTVVMHC
FSSTSSYNVSFVSQPSVGSGRAWLGVTVGYKMQSVSVYTHSTVFAADTDITFVAVTKETI
PLEFVWYFGDDPPVRTSSRSLTRRLSIPQRYHVIVEASSRIGSVVSESHLISIQKRIMAN
RLMSPASALVNANVSFECRLNFGTDVAYLWNFGDGTIETGNSSCSHVYSREGEFTVEVLA
FNNISSAVLRKPLFIVHEPCQPPPVKNMGPKKVQIWRSQPLRLAVTLEAAVLCNISQGLS
YTWAIADAEATVITLPAAVNTLGQTIVLPSYTLECGNYTATAKVQIKGSMVYSNYSVGVE
VRARAPVSVISEGTHIFIPRATTTSIILRGFQSYDPDNPGAALRYHWTCTAASSPRWPCF
EDSTPYQVDTQAPAISFPAKWLSGCCDQFLVTLTVSSNGQNSSQALTFLSTHSDPDFRFV
HILWVNFRDIRVNWNEELSLRAVCEDCDDIPDLTYSWDLFLVNATEKNTMEGNMATLFLM
NTKRVMYWLPRHQATTMCLGLDLASGFHGRLVYSSTMLPGKAGTSVQSPQMWHQDTPLMS
SPLKSGASLEDNLWLGEIAGVSGMNSGALSLLLLGSFGSQAPTASVLFHFLCFQDYVRYC
SHLSLEVAMVNPNSQTISLPRSTMGLLGVSASGAILKLSQSDLQSSLRGSLSRHSQERLP
MPPSWTALHNQGSISAESTAGGHHILAVVGPMAGSGEPMEDSSPLSPAPGSLDEEALMMS
TPEGSWPPSSSSPAFDDFEAYYSDIQEDVPSPGRQPGTSTSFRESGPSMNAEKSTSDGDN
LLGPFLHTGRTKPALMIDWPKAQVSRAVFHSYTSSGTMGPDVTIRPFSLISGEMYVLQAS
VASKKVLLGKAQLYITVNQVPQDMSCQVRPHSGMEAHTIFSVFCMSGKPDFHYEFHYRVG
NTSPHTLYSGRDTQYYFRLPAGEPSDNYKVIVSTEITDGQGSKVQPCSVEVTVLPRYHGN
DCPDKDLYNSTLDTLSSLQLVGSYTEVRNYIAMTTVILNRLYVESRNTSTCGLWAQIQDV
LISSACRVPFTDQEAMVDSIHILRDLISFPNKLSFMSAVHILEYAQMLLAQGPFSRKLLV
NKNLGVELIFLISGVWEAAKEDMRKEDSLQEEGMKIISDMLLTCLSLSHQLQLHISTGKM
EFWTLLHHSFQKSSQNLGFIWVHFPGYLTLRRPAQEASQSPCYISQLMLFTNSPYPEGRG
PGQVGSVVSPRFYSCKSRSPILRGRLETPVTVEFGEEDHLVKTRHPTVFTLLRDEVNLHR
FTGLSENPQETLQIRIRFLKPRTRAFPVMLLVRFSKKATPSDFLVKQVYFWDEQTVQIYV
PAVPRKGADVGYLSLLDADYDRRPPNKYLAGAVNYTVHFQWIQCVFWDKTEWRSEGLCPQ
PGTSPERVNCSYHRLAPFSVLRRKLNATFEVSSLSEFRSDPRNLLPGIFSVFLLVLYGIL
VTKSRCIGCQKKKKPGCIFLEGDTPPGHQLYAVIVDTGFRSPAQFTSKVFIVLCGETGLS
VTKELCCPEMSLFGRNSRHIFILSTPNQLGPLQKIRLWHDNSGPSPNWFVSHVMVKELHS
GQGWFFPAQCWLAVSLCDGRVQRELFCLRNGLGFWKLFYAKFTEYLEDFHIWLSLYSQPP
SSSYLHTQRLAVAFCLLCVYSCLTALVTVGVHEQRPLGVGPTLESFRLGLLCTFLACPAA
QLLSLLFRFSKSHTCSPTPTGPDRNGRPGLRQPSQHPASDILPGTDRPWRMAANSSGVTC
SPFLAPREKSHHPPPSSQAPSGGFEGLVPRWSRVCLRWSSSVVWAICGVVSLACDLGTGF
LGYRFVPEQCIWWLHLLLLSVVCCVFVTQPLMICLAALDFAWKKKHDSQFFTESLRDATK
DLDLELEEYSRTHLPLSPSSHSPESAEEAERVLAARQRDRHLRWAQPPSRAKFRVTRERL
RKENQMQAALRGISTHSLMLLLLLFITYGRVCPGEYSLNQAIRKAFTRNARHSFGDLNST
DGWWDWTLSMLLDGLHPEGPSAGARGAQPGALGGQCHLIGPAVIKQLRVSSGTACTPSRP
VSEATEDAPPTQSHDLDLENLKLTPSGPEACGAKKKISVYSLGRTRHDVHVALTALRTGR
WVDQRTRAMSIHFILYNPPTRLFTSVTLAAELLPTGGLVPSSLVESISIYGDSAPRYLLM
LSELAFLVLNVTHLCFQLWGMVTKGVLSYWRKPRPWLELSTVGVALAYYTASGHLTTLAE
NVTDQFHKGLRQMFVDLSLMVSWNQRVRWLRGSLLFLWMLKCAHLLGLLSSRAAFSAVTR
SSLSRALAPALLGALSLAAYSHLCRFLLFTGMQSPGTSTDAFPELLLQFLGRNQKDSLHN
RLESGRRAMACYCGALFLLVAALCFGMLRASLLTLFRKRKSAQRKSHVTLTNVAVYAWHK
VLTILGLETTLEETEVVTDQNYYLDEFSSLLDELLVKIDGLSDSLELSSLENQWRRTVES
RTEESPLIGIPGYHATALCPPRRTQLPAAEKSQKDEQGSGNFCIHLALGAMGFFHEMERG
HEHRQENDSKDKTILDIRFLQLPAIFSPAVFARGHQPETSLREILHRGLRTANNRVQPAP
AAGPENTVIRKVPETHSSRLQEAVFRQSSEDPLHWPISLAKITLDIGSPKPKVDQLFVAS
SALNFENRSVKETNRRLVGSGLPSSGGEAHGIANDIHWTAIRKPGIRKKNQGSVAVSSPS
HQQMETTTDRQLVKIQRTVGHPAETSPTQPLYLPRARRTSRKRAEKDEKGQKTRESVARL
RVLDMHGNCTHEIAARGLPKQGQHQLMCQCGWGNLTALFPYR
NT seq
9129 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagcatatgacagcatgtctctgccttctgtcatgatcaggagcatcgggaac
agcaccagtccccgcttctgtctccggtggctgtgtcagtctgaaagagcacatgcatca
ttctctggtctgcagcagggcgccctctgcagcccgaagaagggagttctttgctgcaaa
gaactgtgctcagcggaagacctgtccaagaagctgcttttgaggtctgtcaccnaggag
gtccccaccagggtggtcacagccacacagaccagaacccaggcagctctctggcatcct
actgggcctatcccagtgaagcagcctgaaaacactgggcactttgccatcaactacttc
ccagacacagacgctcaggcgcctccagctctgggaatccgtgtccaccctgcttccgga
acacttcttcgtctgctggtggacttcggggacggttgcagagctgagatgagactatgt
acaatgacaggtgcagctgcagtgactagctgccacaggtacaggaaagaaggagtctac
aagctcagggctgttgtccatgacgttcatggagctgatgtggaactggggccgtattac
gtgaacattggccatgagaatgtgtctgtattcatgaactccagctctacccacgagggt
gaagccctttcctttgccgacttcctcccactgcagaaaggcacagtcgtgatgcactgc
ttttcatctacatcctcatacaatgtgtcctttgtttctcagccctcagtgggcagcggc
cgggcttggcttggtgtgactgtcgggtataagatgcaatctgtgtccgtctacacccac
agcactgtgtttgctgcagacacagacatcacatttgtggctgttaccaaggaaaccata
cccctggagtttgtatggtatttcggagatgacccacccgtgaggacatcttccagaagc
cttacaagaaggctgagcatccctcagaggtaccacgtgatagtcgaggccagcagcagg
atcggcagtgtggtgtctgagtcccacctcatcagcatacagaagaggatcatggccaat
cggctcatgtccccggcctcagccctggtaaatgccaacgtgtcctttgagtgcaggctc
aactttggcacggatgtggcctatctttggaactttggagatggtaccatcgagacgggc
aacagctcctgcagccatgtttacagcagggagggtgagtttacagttgaagtcctggcc
ttcaataacatcagctccgccgtcctaaggaagccgcttttcatcgtgcacgagccttgc
caaccacctccggtgaagaacatggggcctaagaaggtgcagatatggcgctctcagccc
ctgagattggcagtgacactggaagctgcagtcctctgtaacatttcccaagggctttcc
tacacctgggccattgcggatgctgaggcgactgtcatcaccctccctgctgccgtcaac
accctcgggcagaccattgtgctccccagctacaccctggagtgtgggaactacactgct
acagccaaggttcagatcaagggaagtatggtgtatagcaactacagtgttggtgtggaa
gttcgagccagggctcctgtcagtgtgatctctgaaggcacccacatcttcatccccagg
gccaccacgacctccatcatcctcagaggcttccagtcctatgaccctgacaacccaggg
gctgctctcaggtatcactggacttgcaccgcagccagttcaccaaggtggccctgcttt
gaggactctactccataccaagtagacactcaggctcctgccatttccttcccggcaaaa
tggctcagtgggtgctgtgaccagttccttgtgaccctgacagtctccagcaatgggcag
aactcttctcaggccttgacattcctgtccacccattcagacccagacttcagattcgtc
cacatcttgtgggtcaactttagagacatccgtgtaaactggaatgaagaactgtctctc
cgggctgtgtgtgaagactgtgatgatatacccgacctcacttattcctgggatctcttc
ctggtcaacgcaacagaaaagaacaccatggaaggtaacatggctactctttttctgatg
aatacaaaaagggtcatgtattggcttcctcggcaccaggccacaaccatgtgcctgggt
cttgatctggcatcggggttccatggcaggcttgtttacagcagcaccatgcttcctggg
aaggcgggaacaagtgttcagtcaccccagatgtggcaccaagacacacccctgatgagc
agtccactcaagtcaggagcatcactggaggacaacctgtggttaggagaaatagctgga
gtctcaggtatgaattctggggccctctccctgcttctgctagggagttttggcagccaa
gcccccaccgcctctgtcctgtttcacttcttgtgtttccaggactatgtaaggtactgc
agccacctcagccttgaggtggcaatggttaacccaaactctcagacaatatctttgccc
cgcagcaccatggggctgctgggtgtttcggcatctggcgctattctgaagttgtctcag
tcagacctgcagtcaagcctgagaggatccctgtcacgacactcacaagagcggttgccc
atgcccccgagctggacagctcttcacaaccagggaagcatttctgctgagtccacagca
ggaggacaccacattcttgctgtggtgggtcccatggcaggctcgggggagcccatggag
gactccagcccattgagtccagcaccaggttctctggatgaggaagctttgatgatgagc
accccagagggaagctggcctccttctagctcctcccctgcctttgacgattttgaagcc
tattatagtgacatccaagaagacgtgccatcccctggaagacagccagggaccagtacc
agtttccgggaatcaggaccaagcatgaatgctgagaagagtaccagtgatggggacaac
ctgctgggccctttcctacacacaggcagaacaaagccggctctcatgattgactggccc
aaggcccaggtcagccgagctgtcttccacagctacacctcctcaggtaccatgggaccg
gatgtgacaataagacccttctcactcatcagtggcgagatgtatgtcttgcaggcttct
gtagcttcaaagaaggtcttactaggcaaagctcagctctacataacggtcaaccaagtt
ccacaggacatgtcctgtcaggtgcgaccccacagtggtatggaggcacataccatcttc
agtgtcttctgcatgtcagggaaaccggacttccattatgaatttcactaccgggtagga
aacacttctccacataccctgtacagcggacgagatacccagtactactttcgattgcca
gctggtgagccctcagacaattacaaagtcattgtttctactgagatcacagatggccaa
ggctccaaggtgcagccatgcagtgtggaagtgactgtgctaccccgttaccatggaaat
gactgccctgacaaggacctatacaactccaccctggacaccctgtcttctctccagctg
gtggggagttacacagaagtcaggaactacatcgccatgaccactgtgatcctgaatcgt
ttgtatgtggagagcagaaacacatctacctgtggcctatgggcacagatacaggatgta
ttgatttcttcagcatgcagagtaccttttacagaccaggaagcaatggtagactctatt
catatactgagagacctcataagcttccctaataagttgagctttatgagtgctgtgcac
atcctcgaatatgcacagatgctcctggcccaaggcccgttctccaggaagttgctggtc
aacaaaaacctgggagttgagcttatttttctcatctctggagtctgggaagctgccaaa
gaagatatgagaaaggaggactctctgcaggaagaaggcatgaagatcatctctgacatg
ttactaacctgtctctccttgagccaccagcttcagcttcacataagcactgggaagatg
gaattctggacccttctccatcacagcttccagaagtctagtcagaacctgggcttcatc
tgggtccatttccctggctacctgaccttgcgccgtcctgctcaagaggcatcccaaagc
ccatgctacatcagccagctcatgctcttcacgaatagcccttacccagagggacgaggt
cctggacaggtgggcagcgtggtgagccctagattctacagctgcaagagtagaagcccc
attctcagaggacggctggagacacctgtgacagtggagtttggggaggaagaccacctg
gtaaagacaagacatccaaccgtgttcaccttgcttcgggatgaggtgaatctccaccgg
ttcactgggctttctgaaaacccccaggaaaccttacagatacgcatcagattcttgaag
cccagaacaagagccttccccgtcatgctgctagtaaggttctccaagaaggccacgcct
tcggattttcttgtgaagcaggtgtacttctgggatgagcagactgtgcaaatttatgta
cctgctgttccgcggaaaggagctgatgtggggtatttgtccctattagacgctgattat
gacaggagacctccaaacaaataccttgctggggcagtaaactacacagtgcatttccag
tggatccagtgtgtgttttgggacaagacagagtggagatccgaaggtctctgtccgcag
cccggaacttctcctgagagagtcaactgtagctaccatcgcctggcgcctttctctgtc
ctcagaagaaagctgaatgccactttcgaagtgagcagcctttctgagtttcggagtgac
ccacgtaatttgcttcccgggattttcagtgtgtttctcttggttctttatggaattctg
gtgactaaaagcagatgtataggttgtcaaaagaaaaagaaacctggctgtatttttctg
gaaggagacaccccacctggccaccagctgtatgcagttattgttgacactggcttccgg
tcaccagcccaatttacgtcaaaggttttcattgttttatgtggtgaaactggactctca
gtaaccaaagaactctgctgcccagagatgtctttatttggaaggaattccaggcacatc
tttatactgagcacccctaaccagctgggtccactccagaaaatccggctgtggcacgac
aacagtggaccgtccccaaactggttcgtcagccacgtgatggtgaaggagctacactca
ggccaaggctggttcttccctgcccagtgctggctggctgtgagcttatgcgacggccgt
gtgcagcgagagctcttctgcctgcgcaatggtcttggcttctggaagcttttctatgcc
aagttcacggagtacctggaggatttccacatttggctctcactgtacagccagcccccc
tccagcagctacctgcacacacagcggcttgccgtggccttctgtctcctgtgtgtctat
tcgtgcctcactgccctggtcactgtgggagtccatgaacagcgcccgctgggtgtgggg
cccactctggaatccttccgtctgggcctcctgtgcacctttctggcctgtccggctgcc
cagctattgtcgctgctcttcaggttcagcaagtcacacacttgttcccccaccccaaca
ggccctgatcgcaatgggagaccaggtttgaggcagccatcccagcatcctgcatcagac
attctcccagggactgacagaccttggaggatggcagccaatagcagtggtgtgacctgt
tcaccctttcttgctccgagagagaagagccaccaccctcctcctagttcacaagctccc
agcggtggttttgaagggctcgtgccccggtggtcaagggtctgtctgcgctggtcaagc
tctgtggtctgggccatttgtggggtggtgtccctggcctgtgacttggggacaggattc
ctaggctacaggtttgtgccagagcagtgtatatggtggctgcacctgctgcttctctct
gtggtctgctgcgtatttgtcacccagccactcatgatctgtttggcagcactggacttt
gcttggaaaaagaaacatgacagccagttttttacggagtctttacgtgatgcaaccaag
gatctagatttggaattggaagaatactccagaacccaccttcctctttctcccagctcc
cacagtcctgagagtgctgaggaggccgaaagggtcttggctgcaagacaacgagatcgc
cacctgcgctgggctcagccaccatccagggccaagttcagagtgaccagggagagactg
aggaaagagaaccaaatgcaggcagcactgagaggcatttccacgcacagcctcatgctg
ctgctgcttttgtttataacatatgggagagtctgcccgggtgaatattctctcaaccaa
gccatcaggaaggcatttacaagaaatgccagacactcctttggggacctgaacagcaca
gacggctggtgggactggactctgagcatgttgctggatgggctgcacccagaaggaccc
tctgctggagcccggggggctcagcctggagctctcggagggcagtgccacctcataggc
cctgcggtgatcaagcagctcagggtttcatctggtactgcatgcacgccttccaggcca
gtctcagaggccacggaagatgcaccacctacccagagtcatgaccttgaccttgagaac
ctaaaactgacccctagtggtcctgaggcctgtggggcgaagaagaagatctccgtgtac
agcctaggaagaacaaggcacgacgtccacgtagccctgactgccctcaggaccggcagg
tgggtggaccagcgcacgagggccatgtctatacacttcattctctacaaccctcccacg
cgactcttcaccagtgtgaccctagctgcagagcttctccccacgggaggtcttgtcccc
tcatccctggtggaatcaatcagcatctatggtgactcagccccacgctaccttcttatg
ctttctgagctggcgttcctagtcctcaacgtgacccacctctgtttccagctctgggga
atggtcaccaagggcgtcctcagctactggagaaaaccaagaccctggctggagctctct
acggttggggtagccctggcctactatacggcctctggtcacctcactacccttgccgag
aatgtcactgaccagttccacaaaggacttcgtcagatgtttgtggacctaagtctgatg
gtgtcatggaatcagagggtaagatggctccggggaagcctgctgttcctctggatgttg
aaatgcgctcacctcctcggcctcctaagcagcagggcagccttctccgcagtgacgcgt
tcatctctctccagagccctggcacccgcactgttaggggccctgtcgctggctgcctat
tcccacttgtgccgctttctgctcttcaccgggatgcaatcacccggcacctctacagat
gcatttcctgagctgctgcttcagtttctgggaagaaaccaaaaggactcacttcacaat
cgcttggagtctgggcgtcgagccatggcttgttactgcggggccctgtttctgctggtg
gccgctctgtgttttggaatgctgagggcttccctcctgactttgttccgaaaaagaaag
tctgctcaaagaaaatctcatgtgacacttacaaatgttgccgtttatgcatggcataaa
gtcctcaccattctggggctggaaacaactctggaggagactgaggtggttacggatcag
aattattacctggatgaattttcaagcctattggatgaacttctggtaaagattgatggt
ttgtctgacagcctagaactctctagcctagaaaaccagtggaggaggacagtggagtca
aggacagaggagagtcctctcattggcattccagggtaccatgctactgcgttgtgtcca
ccaaggaggacacaactcccagcagcagaaaaatctcagaaagatgagcaaggatcgggc
aacttttgtatccatttagctctgggtgcgatgggcttcttccatgaaatggaaaggggc
cacgaacacagacaagagaatgacagtaaagacaagactatcctagacatcaggtttctc
cagctcccagccatcttctccccagctgtgtttgcaagagggcatcaaccagaaacaagc
ctgcgagagatcctacacagaggactcaggacagcaaacaacagagttcagcctgcccca
gcagcaggtccagagaatacagttatcaggaaggtaccagaaactcacagcagcaggtta
caggaagctgtgttcagacaatcaagtgaagacccacttcattggccaatctcattagcg
aagataacactggatattggtagtcctaaacccaaagtggatcaactttttgtggcaagc
tctgctctcaactttgagaacagatcagtgaaggagaccaacagaaggcttgttggtagt
ggcttaccttccagtgggggggaggcacatgggatagcaaatgacatacactggacggct
atcaggaagccgggtatcaggaagaaaaatcaaggaagtgtggctgtcagctccccttca
caccagcagatggagaccactacagacagacaactagtgaaaatacagagaactgtgggg
cacccagctgagacatctccaacacaaccattgtatctacctagagctcggagaacatca
aggaagagggcggagaaagatgaaaagggccagaagaccagggagtctgttgcaagatta
agagttctagatatgcatggaaattgcacccatgagattgcagcaagaggactacctaaa
caaggacaacaccagttgatgtgccagtgtggatggggaaatctgacagctcttttcccc
tacagatga
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integrated database retrieval system
