Arvicola amphibius (Eurasian water vole): 119811265
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Entry
119811265 CDS
T08327
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03013
Nucleocytoplasmic transport
aamp05014
Amyotrophic lateral sclerosis
aamp05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119811265 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
119811265 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
119811265 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119811265 (Nup98)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119811265 (Nup98)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119811265 (Nup98)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119811265 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
119811265
NCBI-ProteinID:
XP_038180964
LinkDB
All DBs
Position
1:complement(104166005..104258970)
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GASTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSGFSYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTPNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPSTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNNSGSSIF
GSKPAPGTLGTGLGTGFGTALGAGQASLFGNSQPKIGGPLGTGAFGAPGFNTTTAILGFG
APQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNHDSEDLASPSEYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYT
NPIAKPIPQTPESSGNKNNSSSSVDDTIVALNMRAALRNGLEGSSEETSFHDESLQDDRE
EIENNAYHIHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPPKTT
SKKLKTAPLPPASQAAPFQMTLNGKPAPTPQSQSPEVEQLGRVVELDSDMVDITQEPVLD
SVLEESMPEDQEPVSASTHIASSLGINPHVLQIMKASLLVDEEDVDAVDQRFSHFPSKGD
TVQEICSPRLPISASHSSKSRSIVGGLLQSKFASGAFLSPSASVQECRTPRTSSLMNVPS
TSPWSVPLPLATVFTVPSPAPEVQLKTVGIRRQPGLVPLEKSVTYGKGKLLMDMALFMGR
SFRVGWGPNWILANSGEQLHGSHEPESHQVADSMDYGFLPNPVAVKSLSESPFKVHLEKL
GLRKRKVDEDLQLYQTPLELKLKHSTVHVDELCPLVVPSPGVSVIHDYADWVKEAPRDLP
EVQTLKHWSLTWTLCEALWGHLKELDSQLDEPTEYIQVLERRRAFSRWLSRTAAPVIEEE
VSLTRRDSPIEAVFSYLTGSRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLAD
WHQLQADCFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRALAVHLWYLLPPTAS
ISKALSMYEEAFQNTSEGDKYACSPLPSYLEGFGCIVEEEKDTRRPLQDVCFHLLKLYSD
RHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVFLHIENSGMREKAVRELLTRHCQLTETPESWAKETFLTQKLCVPAEWIHEAKA
VRAHMESDKHLEALYLFKAGHWNRCHQLVIRHLASDAIINENYDYLKGFLEDLAPPELSS
LIQDWETSGLVYLDYIRVIEMLHRIQQVDCSGYELEHLHTKVTSLCSRIEQIPCYSAKDR
LAQSDMAKRVANLLRVVLSLQHAPDATSNSTPDPQRVPLRLLAPHIGRLPMPEDYALEEL
RGLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaaccccctttgggggtgggacagggggctttggcacaact
tcaacatttggacaaaatactggctttggtactactagtggaggagcatttggaacatcc
gcatttggttctagcaacaatactggaggcttattcggaaattcacagaccaaaccaggt
ggtttatttggtaccaattcattcagccagccagcaacttccacaagcactggctttggg
tttggtacatcaacaggaacatcaaatagtttgtttggaactgcaagtacagggaccagt
cttttctcatcccagaacaatgcatttgcacaaaataaaccaactggctttgggaatttt
ggagcaagtactagcagtggaggactctttggaactacaaataccacctctaaccctttt
ggtagcacatctggctccctctttgggccaagtagttttacagcagcacctacaggaact
accattaaatttaatcctcccactggtacagatactatggtcaaagctggagttagcact
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgagagcaagtcacta
gaggaacttcgtttggaggattatcaggctaaccggaaaggcccacagaaccaagtggga
gcaggtaccacagctggcttatttgggtcttctccagcaacttccagtgcaacaggactc
ttcagctcctccaccactaattcaggcttttcatatggtcagaataaaactgcctttgga
actagcacaactggatttgggacaaatccaggtggtctctttggccaacagaatcaacag
actaccagtctcttcagcaaaccatttggccaggctacaaccaccccgaatactggcttt
tcctttggtaatactagtactcttggacagccgagcaccaatactatgggcctatttgga
gtaacccaagcctcacaaccaggaggtctttttgggacggctacaaacaccagcactggg
acagcatttggaacaggaacaggtctctttgggcagcccagtactggatttggtgcagtt
ggttcgaccctgtttggcaataacaagcttacaacttttggaaccagcacaaccagtgct
ccttcctttggtacaaccagtggcgggctcttcggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggcacaaataacagtgggagtagtattttt
ggaagtaagcctgcacccgggactctgggaactggacttggtacaggatttggaacagct
cttggtgctggacaggcatctttgtttggaaacagtcaacctaagattggagggcctctt
ggtacaggagcctttggggcccctggatttaatactacgacagccattttgggctttggc
gccccccaggccccagtagctttgacagatccaaatgcttctgctgcccagcaggctgtt
ctccagcagcacctcaatagtctaacatactcaccctttggagactcccctctcttccgg
aatcctatgtcggatcctaagaagaaagaagagaggctgaaaccaaccaatccagcagct
cagaaggctcttaccacacctactcattataaacttacacctcgccctgccaccagagtc
agaccaaaggctttgcaaacaactggtacagccaaatcacatctctttgatggactggat
gatgatgaaccatccttagccaatggagcattcatgcccaagaagagcatcaagaagttg
gttttgaaaaatcttaacaatagcaatctcttttctcctgttaatcatgattcagaagac
ctagcttcaccatctgagtatccagaaaatggagagagatttagcttcctgagtaaacct
gttgatgagaaccatcagcaggatggagatgatgattctcttgtatcacgtttttacact
aatcctattgccaaacccattcctcaaaccccagagagttctggaaacaaaaataacagc
agcagcagtgtggatgataccattgttgcgttgaatatgcgtgctgctttgcgcaatgga
ctcgaaggaagcagtgaggaaacgtctttccatgatgagtcattgcaagatgaccgagaa
gaaatagaaaataatgcttaccatatacatccagcaggtattgttctcacaaaagttggt
tactatactattccatctatggatgaccttgctaaaattacgaatgaaaagggagaatgc
attgtttcagatttcaccattggtcgtaaaggatatggctccatctattttgaaggagat
gtaaatttgacaaatctaaatttggatgatattgtgcatatccgaaggaaagaagttatt
gtctatgtagatgataaccaaaagccccctgtgggtgaagggctaaataggaaggctgaa
gttacattggatggagtttggccaacagataaaacatcccggtgtttaataaagagccca
gatcgacttgctgatatcaattatgaggggagattggaagcagtctcaaggaagcaggga
gcccaattcaaggagtaccggcctgaaactggttcttgggtgtttaaggtctcccatttt
tctaaatatggccttcaggattctgatgaagaagaagaagaacacccacccaaaaccact
tcaaagaagttgaagactgcccctttgccccctgcaagccaggcagctcctttccagatg
actcttaatggcaaacccgcacctacacctcagagccagagcccagaagtcgaacagtta
gggagggttgtggaactggacagtgacatggtagatatcacccaggagccagttttggat
tctgtgttagaagagagcatgcctgaggatcaggagcctgtgtctgcttcaacacacatt
gcatcttcactgggaattaatccacatgtcttacagatcatgaaggcatccttgcttgtt
gatgaagaagatgtagatgccgtggatcagcgcttcagtcacttcccctccaaaggagat
actgttcaagaaatctgttctcctagactccccatttcagcctcccactcatcaaaatcc
cgctcaatagttggtgggttgctgcaatcaaaatttgcaagtggagcttttctttcacca
agtgcctctgtccaagaatgtcgtactcccagaacttcatctctaatgaatgtcccatcc
acatccccctggtcagtccccctgccgctggccactgtgtttacagtgcccagcccagct
cctgaggttcagctgaaaacagtagggatacgcaggcaaccaggcctagtccctcttgaa
aaatctgttacatatggcaaggggaaactcttgatggacatggccctgttcatgggacgt
tcatttcgggttggttggggccccaactggattcttgctaacagtggagaacaactgcat
ggctctcatgaaccggaaagtcatcaggttgccgattctatggattatggattcctgccc
aatccagtggctgttaaatctctgtctgaatccccattcaaagttcatttggaaaaactc
ggtttgagaaaaaggaaggtggatgaggatctgcagttataccagactcctctggagctc
aaattaaagcatagcactgtccacgtagacgagctgtgtcccctcgttgtccccagccct
ggggtgtcagtcattcatgactatgcagattgggttaaagaggcacccagagatttacca
gaagtacaaactctgaagcactggagcctgacgtggacattatgtgaagccctatggggc
cacctaaaagagcttgacagccagctggatgaacccactgaatacattcaggttctggag
cgaagaagagctttttcccgctggctgtcgcgtactgctgcacctgtgattgaagaggaa
gtttccttaacccgaagagacagtcccatagaagctgtcttcagctacctcacaggcagt
aggattagtgaggcctgttctctggcacagcagtcaggtgaccatcgccttgcccttctt
ttgtctcagttggtgggcagccagtcagtccgagagttgctcaccatgcagttagccgac
tggcatcagctccaggctgactgcttcatccaggatgagagattgcgcatatttgcccta
ttagctggaaaaccggtgtggcagctctctgaacagaagcaaatcaatgtatgctcccag
ctggattggaagcgtgcgcttgctgttcatctttggtacttgcttccaccaacagcctcc
atttccaaggctctcagcatgtatgaagaagcatttcagaatacttctgagggtgataaa
tatgcctgctcccctcttccttcatacctggaggggtttggttgtatagtagaggaagaa
aaagacacacggagaccacttcaggatgtttgcttccaccttctgaaactctacagtgac
agacattacgatctcaatcagctgttggaacctcgaagcataactgcagatcctttggac
taccgcctcagctggcacctttgggaagtgctgcgggctctcaactatacccatctctcc
gaacagtgtgagggtgtgctacaggccagttatgctggccagctggaaagtgaagggctc
tgggaatgggccatctttgtcttcctacacattgagaactcaggcatgcgtgagaaggct
gtccgcgagctgctgactcggcactgccagctgacggaaaccccggagtcctgggctaaa
gagactttccttacacagaagctctgtgtgcctgctgagtggattcatgaggccaaagca
gttcgagcacacatggaatccgataagcacttggaggccctctatttatttaaggccggc
cactggaaccgctgccaccaacttgtcattcgccatcttgcttctgatgctattattaat
gagaactatgactacctgaaagggttcttagaagacctggcacctccagagctcagcagc
ctaattcaggactgggaaacatctgggcttgtttacctggattatattcgcgtaattgaa
atgctccaccgtattcagcaggtggattgctcaggctatgaactagagcacttacacacc
aaagtcacttcactgtgcagccggatagagcagattccatgttacagtgctaaggaccgc
ctggctcagtcagatatggccaagcgtgtcgccaacttgctgcgggtagttctgagcctg
cagcatgctcctgatgccacctccaactcaacaccagaccctcagcgagttcctttgcgt
ttgttggctccccacattggcagactccccatgcctgaggactatgccttggaggaactt
cgtggtctcacacagtcctaccttcgagaactgactgttgggagccagtga
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integrated database retrieval system
