Arvicola amphibius (Eurasian water vole): 119811272
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Entry
119811272 CDS
T08327
Name
(RefSeq) solute carrier family 22 member 5 isoform X1
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
119811272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119811272
Transporters [BR:
aamp02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
119811272
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
119811272
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Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
119811272
NCBI-ProteinID:
XP_038180931
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Position
4:67078418..67156872
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AA seq
557 aa
AA seq
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MRDYDEVTAFLGDWGPFQRLIFFLLSASIIPNGFNGMSIVFLAGTPEHRCLVPDTVNLSS
AWRNHSIPLETKDGRQVPQKCRRYQLAAMVNFSALGLEPGLDVDLEQLEQESCLDGWEYS
KDIFLSTIVTEWDLVCNDDWKGPLTTSLFFVGVLLGSFISGQLSDRFGRKNVLFLTMAMQ
TGFSFLQVFSVNFEMFTVLFVLVGMGQISNYVAAFVLGTEILSKSIRIIFATLGVCIFYA
FGYMVLPLFAYFIRDWRMLLLALTVPGVLCGLLWWCIPESPRWLVSQGRIKEAEVIIRKA
AKINGIVAPSPIFDPDELQDLNTKTPQSHHIYDLIRTRNIRILTIMSIILWLTISVGYFG
LSLDTPNLHGNIYMNSFLSAAVEVPAYVLAWLLLQYLPRRYSISAALFLGGGVLLFMQLV
PSELFYLSTALVMVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYF
VYLGAYDRFLPYILMGSLTILTAILTLFFPESFGVPLPDTIDQMLRVKGIKQWQAQSQTR
MLKDGEESPTVLKSTAF
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcgagactacgacgaggtgaccgccttcctgggagactggggacccttccaacgcctc
atcttcttcctcctcagcgccagcatcatccccaatggcttcaatgggatgtcaatcgtg
ttcctggcggggaccccggagcaccgttgcctggtgcctgacaccgtgaacttgagcagc
gcgtggcgcaaccacagcatcccgttggagacgaaggacggacgacaggtgccccagaaa
tgtcgccgctaccaactggctgccatggtcaacttctccgcgctaggactggagccggga
ctggacgtggacctggagcagctggagcaggagagttgcctggatggctgggagtacagc
aaggacatcttcctgtctaccatcgtgaccgagtgggacctggtgtgtaacgatgactgg
aaaggccctctcaccacctccttgtttttcgtgggtgtgctcttaggctccttcatttca
ggacagctctcagacaggtttggtcggaagaatgtgctgtttttgaccatggccatgcag
actggcttcagcttcctgcaggttttctctgtgaacttcgagatgtttactgtgctcttt
gtccttgttggcatgggacagatctccaactacgtggcagcatttgtcctgggaacagaa
attctctccaagtcaattcgaattatattcgccacattaggagtgtgcatattttatgca
tttggctacatggtgctgcctctttttgcatacttcatcagagactggcggatgctgctg
ctggcactcactgtgccaggggtgttgtgtggtcttctctggtggtgtattcctgagtcc
ccccgatggctcgtctctcaaggccgaattaaagaggcagaggtgatcatccgcaaagct
gccaaaatcaatggaattgttgcaccttcccctatctttgatccagatgagttacaagac
ctaaataccaagacacctcagtcacaccacatttatgatctgatccgaacccggaatatc
aggatcctcaccatcatgtccataatcctgtggctgaccatatcagtgggctatttcgga
ctttctcttgacactccgaacttgcatggaaacatctatatgaacagcttcctttcggcg
gctgttgaagtcccagcctatgtgttggcctggctgttgctgcagtacttgccccggaga
tattccatctctgctgccctcttcctgggtggcggtgtacttctcttcatgcagctggtg
ccctcagaattgttttatttgtctactgccctggtgatggtgggcaagtttggaatcacc
tctgcctattccatggtctacgtgtatacagctgagctgtaccccactgtggtcagaaac
atgggtgtgggggtcagctccacagcatcccgccttggcagcatcctgtctccctacttt
gtttaccttggtgcctatgaccgcttcctcccttacatccttatgggaagtctgaccatc
ctcacagctatcctcaccttgttcttcccagagagctttggtgtccctctcccagatacc
atcgaccagatgctaagggtcaaaggaataaaacaatggcaagcccaaagccagacaagg
atgctaaaagatggtgaagaaagtccaacagtcctaaaaagcacagccttttaa
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