Arvicola amphibius (Eurasian water vole): 119811288
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Entry
119811288 CDS
T08327
Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04371
Apelin signaling pathway
aamp04613
Neutrophil extracellular trap formation
aamp05034
Alcoholism
aamp05203
Viral carcinogenesis
aamp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
119811288 (Hdac5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
119811288 (Hdac5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
119811288 (Hdac5)
05203 Viral carcinogenesis
119811288 (Hdac5)
09165 Substance dependence
05034 Alcoholism
119811288 (Hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119811288 (Hdac5)
Enzymes [BR:
aamp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
119811288 (Hdac5)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
119811288 (Hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
119811288
NCBI-ProteinID:
XP_038180980
LinkDB
All DBs
Position
4:19319022..19353923
Genome browser
AA seq
1130 aa
AA seq
DB search
MLLVPKAQGLVEMLQTIYETESCFSADGMSGREPSLEILPRTPLHSIPVAVEVKPVLPGA
MPSSMGGGGGGSPSPVELRGTLAGPVDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGSLNHSLPQHPKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQG
GTLTGKFMSTSSIPGCLLGVTLEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSP
LVTGERVASSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQLQ
LGKILTKTGELPRQPTTHPEETEEELTEQQEALLGEGALTMPREGSTESESTQEDLEEEE
DEEEEDEDCIQVKDEEDESGPDEGPDLEESNAGYKKLFTDAQQLQPLQVYQAPLSLATVP
HQALGRTQSSPAAPGSMKSPPDQPTKHLFTTGVVYDTFMLKHQCTCGNTHVHPEHAGRIQ
SIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPIS
QKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGH
HAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISL
HRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEF
SPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAIC
DASEACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIEIQSKHWSCVQRFATGLGCSL
REAQTGETEEAETVSAMALLSVGAEQAQAVATQEHSPRPAEEPMEQEPTL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccaaggcacaggggctcgtggagatgctgcaaaccatctatgagacc
gagtcctgtttctcagcagatggcatgtcaggccgggaaccatccttggaaatcctgcca
cggactcctctgcacagcatccctgtggcagtggaggtgaagccggtgctgccaggagcc
atgcccagctccatggggggtggaggtggaggtagccctagccctgtggagcttcggggg
actctggcaggccctgtggaccctgcgctacgggagcagcagctgcagcaggagctcctg
gtgctcaagcagcagcagcagcttcagaagcagctcttgttcgccgagtttcagaagcag
cacgaccacctgacgaggcagcatgaagtccagctgcaaaagcatctcaagcagcagcag
gagatgctggcagctaagaggcagcaagagctggagcagcagcggcagcgggagcagcag
cggcaagaggagctagagaaacagcggctggagcagcagctgcttatcctgcgcaacaag
gagaagagcaaagagagtgccatcgccagcaccgaggtcaagctgaggctccaggaattc
ctcttgtcaaagtcaaaggagcccacgccaggcagcctcaaccattccctcccacagcac
cccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagcggc
cctcctgggacgcctccctcctacaaactgcctttgcttgggccctatgacagccgtgat
gacttccccctccgcaaaacagcctctgaacccaacttaaaagtacgttcgaggctaaaa
cagaaggtggcggagaggagaagcagtcccctcctgcgtcggaaagacggcactgttatt
agtacctttaagaagagagcagttgaaatcacaggcacgggacctggggtgtcgtccgtg
tgtaacagtgcgcccggctctggccccagctctcccaacagttcccacagcaccatcgct
gagaacggctttactggctcagtccccaacatccccactgagatgctcccccagcaccgg
gccctccctctggacagctccccaaaccagttcagcctctacacgtctccttctctgccc
aacatctccctagggctgcaggccacagtcaccgtcaccaactcgcacctcaccgcctcc
ccgaagctgtcgacacagcaggaggctgagaggcaggcccttcagtccctgcggcagggt
ggcacgctgactggcaagttcatgagcacatcatccatccctggctgcctgctgggcgtg
acattggagggcgacacaagccctcatgggcatgcttccctgctgcagcacgttctgctg
ctggaacaggcccggcaacagagcacgcttatagctgtgccactccatgggcagtcccca
ttggtgacaggcgaacgcgtggccagcagcatgaggacagtgggcaagctcccgaggcac
cgacctctgagccgcactcagtcctctccactgccgcagagtccccaggccctgcagcag
ctggttatgcagcagcagcaccagcagttcctagagaagcagaagcagcagcagctgcag
ctgggcaagatccttaccaagacgggggagctgccaaggcagcccaccacccaccccgag
gagacagaggaggagctgacagagcaacaggaggccttgctgggggaaggggccctgacc
atgccccgggaaggctccacagagagtgagagcacccaggaagacctagaagaggaggag
gatgaagaggaggaagacgaagactgcattcaggtcaaggatgaggaagacgagagtggt
cctgatgagggccccgacttagaggagtccaatgctggttacaaaaagttgttcacagat
gcccagcagctacagcccctgcaggtgtaccaggcacccctcagcctggccactgtgcct
catcaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaagagcccc
ccagatcagcccactaagcacctcttcaccacaggtgtggtctatgacacgttcatgctg
aagcaccagtgcacatgcgggaacacacatgtacacccggagcatgctggccgcatccag
agcatctggtcccggctgcaggaaactggcctgctcagcaagtgtgagcggatccggggt
cgtaaagccacgctggatgaaatccagacggtgcattctgagtaccacaccctgctctat
gggaccagccccctcaaccggcagaagctggacagcaagaaactgcttggccccatcagc
cagaagatgtacgccatgctgccttgtgggggcattggggtggatagtgacactgtgtgg
aatgagatgcactcctccagtgctgtgcgaatggcagtgggctgcctggtagagctggcc
ttcaaggtggctgcaggagagctcaagaatggatttgccatcatccggcccccaggacat
catgctgaggagtccacggccatgggattctgcttcttcaactccgtagccatcacagct
aaactcctgcagcagaagctgaacgtgggcaaggtgctcatcgtggactgggacattcac
catggcaacggcacccagcaagcattctacgatgacccctctgtgctctacatctcgctg
catcgctatgacaatgggaacttcttcccgggctctggggctcctgaagaggttggtgga
gggccaggcgtggggtacaatgttaatgtggcgtggacaggaggtgtggatccccccatt
ggagatgtggaatacctgacagccttcaggacagtggtgatgcccattgcccacgagttc
tcacctgacgtcgtcctagtctccgctgggtttgatgctgttgaaggacatctgtctcca
ctgggtggctattctgtcaccgccagatgttttggccacttgaccaggcagcttatgaca
ctggcagggggccgggtggtgctggccctggagggaggccatgacttgaccgccatctgt
gatgcctctgaggcctgtgtctcggctctgctcagcgtggagctgcagcccttggatgaa
gcagtcttgcagcagaaacccagcatcaatgcagttgccacactagagaaagtcatcgag
atccagagcaaacactggagctgtgtacagaggttcgccactggtctgggttgctctctg
cgggaggctcagacaggtgagacggaggaggccgagactgtgagcgccatggccctgctt
tccgtgggggctgagcaggcccaggccgttgccactcaagagcatagccccaggccagca
gaggagcccatggagcaggagcctaccctgtga
DBGET
integrated database retrieval system
