Arvicola amphibius (Eurasian water vole): 119811304
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Entry
119811304 CDS
T08327
Symbol
Rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119811304 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119811304 (Rnf43)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119811304 (Rnf43)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119811304 (Rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3H2C3
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
119811304
NCBI-ProteinID:
XP_038181033
LinkDB
All DBs
Position
4:complement(33521852..33588253)
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AA seq
783 aa
AA seq
DB search
MSGSQQLQLAALWPWLLMATLHAGFGRTGPVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEVTPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGASAVLFDITEDRSAAEQLQQPLGLTWPVVLIWGKDAEKLMEFVYKNR
KAHVRIELKEPPAWPDYDVWILLTVVGTIFVIVLASVLRIRCRPHRSRQDPLQQRTAWAI
SQLATRRYQASCRRVRAEWPDSASSCSSAPMCAICLEEFSEGQELRVISCLHEFHRTCVD
PWLHQHRTCPLCMFNIVEGDSFPQGLGASPSYQEPGRRLHLIRQHPGHAHYHLPSAYLLG
PSRNSGAIPPRPRPFLPSQEPRMGSRHQRLPRASHLRAPEEQQHLAVPQHPYAQGWGLRR
LRCTSQHPTACPAALRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFHSSLSSDFDPLVYCSPEGDLRGKRTQHRMTSRPRSLESVVPTG
ETRVSSHIHYHRHGHHHYKKRFQWHGRKPGPENVPQPRPTAPQTQLQPEPSILDPKSTTP
NPAASSVLPNTHRPRSLTEPAPGLAEAASPNPNSNPNSLLNLQKSSLPVRHPQRKRRGGL
SEPLPTSRPQDLTVHPACQVFPGYSPSLAYPWPPEAHPLIFRPPGLDKRLLYEAPSPCYS
RSQPVWLYLPPRQPLGPCSPGEGHSEWSSDMPEGRSCPYPHCQVLPAQPGSEEELEELCE
QAV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcagccagcagctgcagctggctgccctctggccctggctgctgatggctacc
ctgcatgcaggctttggacgcacaggacccgtgctggcagcagcggtggagtctgagaga
tcagcagaacagaaagctattatcagagtgattcccctgaaaatggaccccacaggaaaa
ctgaatctcactttggaaggtgtgtttgctggtgttgcagaagtaactccagcggaaggg
aaattaatgcagtcccacccgctgtacctgtgcaatgccagtgacgacgacaacctggag
cctggcttcatcagcatcgtcaagctggagagtcctcgaagggctcctcggccctgcctg
tcactggccagtaaggcccgaatggctggcgagcgtggagctagtgcggtgctctttgac
atcaccgaggatcgatcagcagctgagcagctgcagcagccgctgggactgacttggcca
gtggtgctgatctggggtaaggatgctgagaagctgatggagtttgtgtacaagaaccgg
aaggcccatgtgaggattgagctgaaggagcccccggcgtggccagattatgacgtgtgg
atcctcctgactgtggtgggcaccatcttcgtgatcgtcctggcttcagtgctgcgcatc
aggtgtcgcccccaccgtagcagacaggaccctcttcagcaacggacagcctgggccatc
agccagctggccaccaggaggtaccaagccagctgtaggcgggtgcgagccgagtggcca
gactcagcgagtagctgcagctcagcccctatgtgtgccatctgcctggaggagttctca
gaggggcaggagctccgggtcatttcctgcctccatgagttccaccgtacctgcgtggac
ccctggctacaccagcatcggacttgccccctctgcatgttcaacatcgtagaaggagat
tcatttccccagggcctgggggcctctccatcttaccaggaaccaggcaggaggctccac
ctcattcgccagcatcctggccatgcccactatcatctcccctctgcctacctgttggga
ccttccaggaattcaggggccatccccccaagacctaggcccttcctgccctcccaggag
ccgagaatgggctctcggcatcaacgcctccccagggcttcacatctccgtgccccagaa
gaacagcagcacctggcagtacctcagcacccctacgcgcagggctgggggctgaggcgc
ctccgatgtacctctcagcaccccacagcttgcccagcggccctgcgtcgggccaggcct
catgacagcagcggatctggagaaagctactgtacagaacgcagcggctacctggcagat
gggccagccagtgactccagctcagggccctgccatggctcttccagtgactcagtggtc
aactgcacagacatcagcctgcagggcatccatggcagcagttcgaccttccacagctcc
ctgagcagtgactttgaccccttggtgtactgcagccccgaaggggatctccgagggaaa
agaacgcaacataggatgacctctcgaccccgttccctggagtcagtggtacccactggg
gagactcgggtttccagccacatccactatcaccgccacggccaccaccactacaaaaag
cggttccagtggcatggcaggaagcctggcccagaaaatgtccctcagcccaggcctact
gctcctcagactcagctccaaccggagccatctatcttggaccccaagtcgaccacgccc
aacccagcagcttcttcagtgctccccaacacacaccggcccaggtcccttacagagcca
gctcctggcctagcagaagctgccagccccaaccccaattccaaccccaacagtcttttg
aacttgcagaaatccagcctccctgtccgacacccacagagaaaacggcggggtggcctc
tcagaacccttgccaacctctcggccccaagacttgactgtgcacccagcttgccaggtt
ttccccggttacagccccagcctagcatacccttggcccccagaggctcatccattgatc
ttcagacctccaggcctggacaagaggctgctgtatgaagccccaagcccctgttactca
cggtcgcagccagtgtggttgtatctgcccccccgccagcctctgggaccatgctctcct
ggagagggacattccgagtggagttctgacatgccagagggaagatcatgcccttatcca
cactgccaggtgctaccagcccagcctggctcggaggaggagcttgaggagctctgtgaa
caagcggtgtga
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integrated database retrieval system
