Arvicola amphibius (Eurasian water vole): 119811382
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Entry
119811382 CDS
T08327
Symbol
Mgrn1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MGRN1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04120
Ubiquitin mediated proteolysis
aamp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119811382 (Mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119811382 (Mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119811382 (Mgrn1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119811382 (Mgrn1)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119811382 (Mgrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
119811382
NCBI-ProteinID:
XP_038181253
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All DBs
Position
4:93104409..93158001
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AA seq
579 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGSRPVQFPYVHSCPHEPVMTLRSLVNIHPQRLPSDLYKDDADSPTEDGEKPRVLYSL
EFTFDCRCPAWLSPSYCQAVEEFLNGMAVYSCKNPSLQSETVHYKRGVSQQFLLPXFKID
FLRGKDDELNFDLDRGVFPVVIQAVVDEGDVVEVAGHAHVLLAAFEKHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENGDNSSECVVCLSDLRDTLILPCRHLCLC
TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPFK
KSKSHPASLTSKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
SDGLSQASCPLAGLDRIIESGLQKGKPQSKSPDSTLRSPSSPIHEEDEEKLSEDSDAPLP
PSGVELALRESSSPESFGTEEVDEPSLKQGSRVPSIDDVLQDGSPQHHACSQPVPPADIY
LPGWSTSMETPHSLGTTSSPWPLLSGSSSEPGATELTPL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagtcgccgcatcgcaggcgtggaggacatcgacattcaggccaac
tcagcctaccgctatcccccgaagtcgggaaactactttgcttcgcacttttttatggga
ggtgagaaatttgacaccccgcatcctgaaggctacctctttggagagaacatggatctg
aacttcctgggcagtcgtccagtccagtttccctatgttcactcctgcccacatgagcca
gtaatgaccctgaggagcctggtgaacatccatccgcaaagactcccttccgacttgtac
aaagacgatgcagacagccctacagaggatggtgagaagccccgtgtgctctacagtctg
gaattcacctttgattgccgatgccccgcgtggctatcaccatcttattgccaggcagta
gaggagttcttgaacggcatggcagtatacagctgtaaaaacccttctcttcagtctgag
accgtccactacaagaggggcgttagccagcagtttctcctgcctnctttcaagattgac
tttctccgagggaaggatgatgagctgaattttgacctggatcggggtgtgtttccagtc
gtcatacaggctgtggtggacgaaggagatgttgtggaagtggctggacatgctcatgtc
ctcttggctgcctttgagaagcacgtggatggcagcttctctgtgaagccgttaaagcag
aagcaaattgtggaccgtgtcagctacctgttgcaggagatctacggcatcgagaataag
aacaaccaggagaccaagccttccgatgacgagaacggcgacaacagcagcgagtgtgtg
gtgtgcctgtcagacttgcgcgacacgctgatcctgccctgccgccacctgtgcctttgc
acttcctgtgcggacacgctgcggtaccaggccaacaactgccccatctgccggctgcca
ttccgagctctcctgcagatccgggctgttcggaagaagccaggggccctgtctcccatc
tccttcagccctgtcttggcccagagtgtggaccatgatgagcactcttgtccctttaaa
aaatcaaagtcgcaccctgcctccctgaccagcaagaaacctaaaagggaaacaaattct
gacagtgtcccacctggctatgagcccatctccttactcgaggcactcaatggtctacgg
gctgtctccccggctatcccatcagctcccctctatgaggaaatcacctactcaggcatc
tcggatggtctgtcccaggccagctgtcctctcgctggactcgatcgaatcatagaaagc
ggcctacagaagggcaagccacagagtaaatctccggacagcaccctgcggtctccatca
tcccccatccacgaggaggatgaggagaagctttcagaggactcggatgctcctctccca
ccgagcggtgtggaacttgctctgcgggagagcagctcccctgagagtttcggaacagag
gaggtggatgagccgtccctaaaacaagggagccgagtgccctccattgatgatgtcctg
caggatggcagcccccagcaccacgcttgcagccaaccagtccctcctgccgacatttac
ctaccaggatggtccacctccatggagacgccacacagccttggcaccaccagctccccc
tggcctctgctgagtggctctagttctgagcctggagctactgagctgaccccactctga
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