Arvicola amphibius (Eurasian water vole): 119811525
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Entry
119811525 CDS
T08327
Symbol
Supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119811525 (Supt6h)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119811525 (Supt6h)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119811525 (Supt6h)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119811525 (Supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
119811525
NCBI-ProteinID:
XP_038181370
LinkDB
All DBs
Position
4:43102466..43140150
Genome browser
AA seq
1725 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEGEEDEGSDSADSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRGQKYRRV
KKMSDDEDDDEEEYGKEEHEKEAIAGEIFQDEEGEEGQEAVEAPMAPPEEEEEDDEESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEDYE
YEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLR
SIPVKAAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIKE
ALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKASRKKLKRIKEDGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAED
EGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFL
YVQMAKELKNKLLAEARESVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFLV
NKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSEA
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMC
HMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAY
RSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHV
DVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQANTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQW
LQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagtgaggccgaagagtcagaggaagaatacaatgatgaaggc
gaggtggtacctagagtcaccaagaagtttgtggaagaggaggatgatgatgaggaggag
gaagaagagaatctagatgatcaagatgagcaaggcaacttaaaaggcttcatcaatgat
gacgatgatgaagaagaaggagaggaagatgagggcagcgactccgctgattcggaggat
gatgttggccacaagaagagaaaacgcacttttgatgaccgtctggaagatgatgatttt
gacctcattgaggagaatttgggtgttaaagtcaagcgaggacaaaaataccgacgtgtc
aaaaaaatgtctgatgatgaagatgatgatgaagaggaatatggcaaagaggaacatgaa
aaggaggctattgcaggggaaatcttccaggatgaggaaggggaagaaggacaggaggct
gtagaggcccccatggctcctccagaggaagaggaggaggatgatgaagagtcagatatt
gacgatttcattgtggatgatgatggacagcctctgaaaaaacccaaatggcgaaaaaag
cttcctggatatacggatgcagccctgcaggaagctcaggagatcttcggggtggacttt
gactatgacgagtttgagaaatacaatgaatacgatgaggagctggaggaagactatgag
tatgaggatgacgaggctgaaggggaaatccgggtgcgtcccaagaaaaccaccaagaag
cgtgtgagccgcaggagcatctttgagatgtatgaaccaagtgaactggagagcagccac
ctcacagaccaggacaatgaaatccgagccactgacctgcctgagaggttccagctccgc
tccatccctgtcaaggcagctgaagatgatgagctagaagaagaagctgattggatctac
agaaatgcctttgccacaccaaccatttctttacaggaaagctgtgattacctagaccgt
gggcagccaactagtagcttcagtcgcaaaggacccagcacgattcagaagatcaaagag
gccctgggcttcatgcggaatcagcattttgaggtgccttttattgccttctaccgaaag
gagtatgtggagcctgaattacatatcaatgacctgtggagagtgtggcagtgggatgaa
aagtggactcagctgagaatccgaaaagagaacctaacacggctgtttgagaagatgcag
gcttatcagtatgagcaaatctctgctgatcctgacaaacctcttgctgatggcatccgg
gctttggatactactgacatggagaggctcaaagatgtacagtcaatggatgaactgaaa
gatgtctacaatcatttcttactgtactatggtcgtgacatccccaagatgcagaatgct
gccaaggctagccgtaagaaactgaaacgcataaaggaagatggagatgaagaaggtgaa
ggtgaagaggctgaagatgaggaacagaggggaccagagctcaagcaggcctcccgccga
gacatgtacactatctgccagagtgcagggctggatggcctggccaaaaagtttggcctc
acacctgagcagtttggggagaacctccgtgacagctaccaacgacatgagacagaacag
tttcctgcagagcccttggagctggccaaagattatgtttgcagccagttccctacacca
gaggctgtgcttgaaggtgcccgatacatggttgcactacagattgcccgggagcccctt
gtcagacaggtgctgaggcaaaccttccaggagagagccaagctaaacataaccccaacc
aagaaaggtagaaaggatgtggatgaggcccactacgcttattcttttaagtacttaaag
aacaagcctgttaaagagctaagagatgaccagttcctcaagataggcctggctgaggat
gaagggctgctcaccattgacatcagcatagacatgaagggagtggaagggtatggcaac
gaccaaacatatttcgaagagatcaagcagttttactaccgggatgagttcagccaccaa
gtacaagaatggaacaggcagcgcaccatggccattgaacgagctttacagcaattcctg
tatgtgcagatggccaaagaactcaagaacaagctgctagcagaggccagagagagtgtt
ataaaggcctgtagtcgaaagctctacaactggttgagggtggcgccctaccgaccagat
cagcaggtggaagaagatgacgactttatggatgagaaccaggggaagggcattcgagtc
ctaggcattgctttctcctctgccagagatcaccctgtgttctgtgccttggtcaatggt
gagggagaagtgactgatttcctccgcctgccccatttcaccaagcggcgaactgcatgg
agagaagaagagcgggaaaagaaagctcaagatattgaaaccctaaagaagtttcttgtg
aataagaagcctcatgtggttactgttgcaggagagaacagggatgcccagatgttgatt
gaggatgtaaagcgcatagtgcatgagctggaccaaggccaacagctttcttctattggg
gtggagctagttgacaacgagttggccattctgtatatgaacagcaagaaatcagaggca
gagttccgggattacccaccagttctgagacaagccgtctctctagcccggcgcatccaa
gaccctctgatagaatttgcccaggtgtgcagctctgatgaagacatcctgtgtctcaag
tttcatcccttgcaggagcatgttgtgaaagaggagctgctcaacgccttgtactgtgaa
ttcatcaaccgggtcaatgaggttggtgttgatgtcaaccgcgccatcgcccatccttac
agccaggccttgatccagtatgtctgtggcctgggacctcgaaaaggaacccacctgcta
aagatcttgaaacagaacaatacccgtctcgagagccgaactcaactggttaccatgtgt
cacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagatcgacactgcctct
ctgggggacagcactgactcatacattgaagtccttgatggctcccgagtccaccctgaa
acatacgaatgggccaggaagatggcagtggacgccttggaatatgatgagtctgcggag
gacgccaatcctgcaggagcccttgaggaaatcttggaaaacccagagcgactaaaggat
ctagaccttgatgcctttgcagaagaactagagagacagggctatggtgacaagcacatc
acattgtatgatatccgagcagagctcagttgtcggtataaggaccttaggacagcctac
cgctctcctaacacagaggagatcttcaatatgttaaccaaagagactccggagaccttc
tatattggaaagctcatcatctgtaatgttactggcattgctcacaggcgcccacagggt
gagagctatgaccaggccatccgaaatgatgagacaggactgtggcagtgccccttctgt
caacaggacaacttccctgaactaagcgaggtctggaaccacttcgacagtggttcgtgc
cctggccaggccattggtgtgaaaacaaggcttgacaatggtgtcactggcttcatccct
accaaattcctcagtgacaaggtggtaaagaggccagaggagcgagtgaaggtggggatg
actgttcactgccgtatcatgaagattgatattgaaaagttcagtgcagacctgacctgc
cggacctcagacctcatggataggaacaatgagtggaaactgcccaaggacacctactat
gattttgatgctgaggctgcagaccacaagcaggaagaggacatgaagcgaaagcagcaa
cgaactacatacatcaagcgagtgattgcacatccatctttccataacataaatttcaag
caagcagaaaagatgatggagaccatggaccaaggcgatgtcatcatccggcccagcagc
aagggtgagaaccatctgaccgtgacctggaaagtcagtgatggcatctaccagcatgtg
gatgtgcgggaggagggcaaggaaaatgccttcagcctgggagccactttatggatcaac
agtgaggaatttgaagacttggatgagattgttgcccgctatgtccagcccatggcttcc
tttgctcgagaccttctgaaccacaagtattaccaggactgtagtggtggggaccggaag
aagttagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttacttc
atctgtgcctgcaaggaacttcccggcaagttccttctgggataccaaccccggggtaaa
cccaggatagaatatgtaacagtgactcctgaaggattccggtaccggggccagatcttc
ccaactgtgaatgggctcttcaggtggtttaaggaccactatcaggatcctgtaccaggc
atcactcccagtagcagcagcaggacccggacccctgcttccatcaatgctaccccagcc
aacatcaatcttgcagatctgacacgggctgtgaatgccttgcctcagaacatgacttcg
cagatgttcagtgccattgctgctgtcacaggccagggacagaacccgaatgctacccca
gcccagtgggcatccagccagtatggctatggtggcagcggaggaggcagcagcgcctac
catgtgttcccaacgccagcccagcagccagtggccacaccgctaatgacccccagctac
tcctacacaactccaagccagcccattaccaccccacaataccaccaactccaggccaac
actaccccacagtcagctcaggcccagccccagccctcctccagctcccgacaacggcaa
cagcagccaaagtccaacagccatgcggccatcgactggggcaaaatggctgagcagtgg
ctacaggagaaggaggcagaacgacggaaacagaaacagcggctgacccctcgaccctct
cccagccctatgattgaaagcacccccatgtccattgctggcgatgcgaccccactcctg
gacgagatggatcggtag
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integrated database retrieval system
