Arvicola amphibius (Eurasian water vole): 119811573
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Entry
119811573 CDS
T08327
Symbol
Nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
119811573 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:
aamp04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
119811573 (Nwd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_LRRK2
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_RIG_2nd
KNTC1_N
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Nucleoporin_N
Beta-prop_IFT122_1st
CNH
Hira
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
119811573
NCBI-ProteinID:
XP_041910847
LinkDB
All DBs
Position
4:complement(105812135..105838509)
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AA seq
1024 aa
AA seq
DB search
MVTPGASLSLTATSKLLHGGGVALQNPWEVGLQVCSCPSPICRRLGCRCAPAPPPPVGGG
VAGVHPAVPGAPAPPPPVGGGVAGVHPAVPGAPAPPPPVGGGVAGVHPAVPGAPAPPPPV
GGGSEGVHPAVPGAPAPPPPVGGGSAGVHPAVPGAPAPPPPVGGRAAGVHPAVPDSPGLW
DPNSCFQVCTAHALLTEPSLQPPFSSHSGAGERVQGHQVLTVPFVCLQGSPGPHRPLCVS
AGVTRSSLSLCVSAGVTRSSPSPLCVCRGHQVLSVPLCVCRGHQVLSVPLCVCRGHQVLT
IPFVCLQGSPGPLCPFVCLQGSPGPHRPLCVTAIAWSLEEKLLVVGTQDGAMVVWDVEEQ
QVVHVLTGHTAEVRCIRVFALGTLAISASKDRTLRLWSLLSGQEKLTILDRGSPTSTEPQ
SWALHVNEMNKVVYLTSNAKISVWNLETAKLVFCIPGDASDPWSCVAVLAARGVLLAVSK
GGQVSLWDSAMGKLQEKYQLSSIKEETPTCAVSIQTRAKLITGFSSGSIFLVSSGEDRLL
EKLPEAVGFLVVSEDDSVLAAGFGRSVRIFLADSQGFHRFMATDLEHEDVVETAAVGPEN
NMIVTGSRDALIQVWSLSEQGTLLDVLEGVGAPASLLVRGGTLVASASSKSSSVKVWDLR
STQKPRPPAPFLDRTGLAAVSHHGSYVYVPKVGDKNKVTIWDVAEGEEQDSLDTSNEVRC
LEVAEQAKLLFTGLVSGIVLVFPLNSRQDVLCIPPPEARKAVNCMSLSKSEDRLAIAYDN
IVLVLDISPGDPCPTIEGPTYTFYTQLPETIASVALLADYRVLYGMTDGGLFLYNCASSK
VFPLEAHGSRVSCVAVSHRELLAVSGAEDALLCLWDLQACRGMFEMSYESSYCRGVRCAC
FSKDDKYVFAGMKDRSIIAWSALDGTLLAVQFVHAVVSRIIPTSNGFMAPTSHGYLIREH
FQCPSARASQQDPLKNFKRAVWLVKTRQRKEQLTAAEASQDTGSVAADGKESKSNKRSQV
CLIL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaccaggtgcatctttgtctctaactgctacatcaaaactgctacatggtggg
ggtgtagctctgcagaatccctgggaggttgggctgcaggtgtgctcctgcccctccccc
atctgtaggaggttgggctgcaggtgtgctcctgcccctcccccacctgtaggaggcggg
gttgcaggtgtgcatcctgctgtgcctggtgctcctgcccctcccccacctgtaggaggc
ggggttgcaggtgtgcatcctgctgtgcctggtgctcctgcccctcccccacctgtagga
ggcggggttgcaggtgtgcatcctgctgtgcctggtgctcctgcccctcccccacctgta
ggaggtgggtctgaaggtgtgcatcctgctgtgcctggtgctcctgcccctcccccaccc
gtaggaggtgggtctgcaggtgtgcatcctgctgtgcctggtgctcctgcccctccccca
cctgtaggaggcagggctgcaggtgtgcatcctgctgtgcctgactctcctgggctctgg
gacccaaactcctgctttcaggtttgcacagcacatgctctgctcactgagccatctctc
cagccccctttctcatcacactcaggggctggtgagagggttcagggtcaccaggtcctc
accgtcccctttgtgtgtctgcaggggtcaccaggtcctcaccgtcccctttgtgtgtct
gcaggggtcaccaggtcctctctgtccctttgtgtgtctgcaggggtcaccaggtcctca
ccgtcccctttgtgtgtctgcaggggtcaccaggtcctctctgtccctttgtgtgtctgc
aggggtcaccaggtcctctctgtccctttgtgtgtctgcaggggtcaccaggtcctcacc
atcccctttgtgtgtctgcaggggtcaccaggtcctctctgtccctttgtgtgtctgcag
gggtcaccaggtcctcaccgtcccctttgcgtcactgccatagcatggagcctggaagag
aagctgctggtggtgggcacccaagatggcgccatggtagtgtgggatgtagaggaacaa
caggtggtccacgttctaacaggacacacagctgaggtgaggtgcattcgagtgtttgcc
ctagggactctcgccatctctgcatcaaaggaccgcaccctgcgcctgtggagcctgctc
tctggccaggagaaactcaccattttggacagaggctcaccaacttccacagagcctcag
agctgggcactccatgtgaatgagatgaacaaagtcgtatacttgacatctaatgcaaag
atcagcgtgtggaatctggaaaccgcaaagctggttttctgtatcccaggagatgcgtct
gacccctggtcctgcgtggcagtgctggctgctcggggtgtgctgctcgctgtgtccaag
ggtggtcaagtcagtctgtgggactcagccatgggaaagctgcaggagaaataccagctt
tccagcatcaaagaggagacacccacctgtgccgtctctatccagacacgggcaaagctg
atcactggcttcagcagcggctccatcttcctggtttcctcgggagaagacaggttactg
gagaagcttccagaagctgtggggttcctggtggtgtctgaagacgattccgttcttgca
gcaggcttcgggagatctgtgcggatttttttagccgactctcaaggcttccaccggttc
atggccacggatctggaacacgaggacgtggtagagacagcagctgtgggtcctgagaac
aacatgatcgtcacaggctcccgggatgcgctcatccaggtgtggagtctgtcagaacag
ggcaccctgctggacgtcctcgagggcgtgggagcccctgcaagcctgctggtccggggt
gggactctggtggcgtctgcttcctcgaagtcttcgtctgtaaaagtctgggatctcagg
tccactcagaagccaaggcctcctgctccatttctggaccgcacggggctcgctgcggtg
tcccatcatggcagctacgtctacgtccccaaggtcggggacaaaaacaaagtcacgatt
tgggatgtggcagaaggtgaggaacaggattccctggacacgtccaatgaggtccggtgt
ctggaggtggccgagcaggccaagctcctcttcacaggcctggtttcggggattgtgctt
gtgttccccctgaattccaggcaagatgtgctgtgtatccccccacccgaggcccgcaag
gctgtcaactgcatgtccctgagcaagagtgaggaccggctggccatcgcctatgacaac
atcgtcctggtgctggacatcagccccggggatccatgtcccaccatcgagggccccacc
tacaccttttacacccagctgccggagaccatagcgagtgtggccctgctggccgactac
cgtgttctctacggcatgactgacggcggcctcttcctgtacaactgcgcaagctccaaa
gtcttcccgctggaggcccacgggagcagggtgagctgcgtggcggtcagccacagggag
ctgctggccgtgagcggggcggaggacgcgctgctctgcctctgggacctgcaagcttgc
aggggaatgttcgagatgagctatgagagctcctactgcagaggggtgcggtgtgcctgc
ttctcgaaggatgacaagtacgtgtttgcgggcatgaaggaccgctccatcattgcctgg
agtgcactggacggcaccctgctggctgtccagtttgtccacgctgtcgtcagccgaatc
atccccacctccaatggcttcatggcccccacaagccacggctatctcatcagagaacat
ttccagtgcccatcagccagagcctcccagcaagatcctctcaagaacttcaagagggca
gtgtggttagtcaagaccaggcaaaggaaagagcagctgactgccgcagaggcctctcag
gatacagggtcagtggccgcagatggaaaagaatcaaagtcaaataagcgctcacaggtc
tgcctgatactgtga
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