Arvicola amphibius (Eurasian water vole): 119811590
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Entry
119811590 CDS
T08327
Name
(RefSeq) tripartite motif-containing protein 60-like
KO
K12029
tripartite motif-containing protein 60/61
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119811590
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119811590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
TRAF3_RING
zf-Nse
Prok-RING_4
Cas8b_N
BHD_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
119811590
NCBI-ProteinID:
XP_038181423
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All DBs
Position
4:111541947..111547342
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AA seq
590 aa
AA seq
DB search
MSSPTTSVQPCTSSGELEAGQADLPAEAHCPICKENFKNPVTIECGHKFCLSCISAFWKD
RKDNFSCPICHFNCPERNFQSNEQLSKSTEVTKWLPVRKGRKQRQKGERSREVQPSALSC
GKDQEVCSPSPTCHFVWPMEDATLYHRKQTEYYIKLWREKVESVEKVLATQRKRLLELKK
RAERRREEVTSEYQQYWLFLREQRENILEELESEELTGLSKMHANIEEFSDHIASLKHLL
EEITRNCVKSELDLLASVKDSYGRYKALKCPAVFSLQLTEYGYQFPPQYSGLDRIIKRFH
VDVLLDPETANCKLKISKDKKTARYESVQKVPQSRRRFCRYPVVLGSEGYSSGRQYWEVD
VENKYQWLLGICQEPFPRSRVKSDKNQQFSVHDRLRGVGLHNGISYVALGHKKIRLLPKV
KPNRVGIFLDSEMHEVSFYNLPDKSLLYRFRDCPSGALWPYFYTGEDVRPLKICTLKNPE
CAEATTNDRKKAQDGREAPAKRDANERNGDQQLTETKRRMEKMRTANEAAVGKQAAGGGE
GVFIQKAKDCQVRVQDAETGLELSTSLPQGAPCVALTTALSIRALALRGN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcccacaacttctgtgcagccttgcacaagctccggggagcttgaagcaggg
caggctgacctcccagcagaggcccactgtcccatatgtaaggagaacttcaagaatcca
gtgaccatcgagtgcgggcataaattctgcctctcctgcatcagtgcgttctggaaggat
cgaaaggataatttctcctgccctatttgccactttaattgtccagaaaggaattttcag
agtaatgagcagctgagcaaatccactgaagtcaccaagtggctcccggtaagaaagggc
cggaagcagagacagaaaggagagcgttccagagaggtgcagccttcagccctttcctgt
gggaaggaccaagaggtttgctcccccagtcccacatgtcacttcgtttggcccatggag
gatgccaccctctatcataggaaacaaactgagtattacattaagctctggagggagaaa
gtagagtcggttgagaaagtccttgccacccaaaggaaaagattgctagaactgaagaaa
agggccgagcgcagaagagaagaggtcacgtctgaataccaacaatactggttgtttctt
agggagcaacgagagaacattcttgaggagttagaaagtgaagagctaactggattatcc
aaaatgcatgccaacatagaagaattctcagatcacatcgcttcattgaagcatctgctg
gaggagataacgcgcaactgtgtaaagtcggaactggacttgctggcaagtgttaaagac
tcctacgggagatacaaagccttaaaatgccctgcggtcttctcgcttcagctgacagag
tatggctaccagtttcctccacagtattcaggcttggacagaattattaagcgatttcac
gtggatgtacttctggatcctgaaacagcgaactgtaaacttaagatctcaaaagataaa
aaaactgcacgatatgagagcgtgcaaaaggtaccgcagagccgcagaaggttttgcagg
taccccgttgttctggggtctgaggggtacagttccggcagacagtactgggaggtagat
gtggagaacaagtatcagtggctcctggggatttgccaagagcccttccccaggagcagg
gtcaagagcgataaaaatcaacagttctcagtgcacgacaggttacggggagttgggcta
cacaatgggataagttacgtcgcgttgggccataagaaaatccgtcttctgccaaaggta
aaacccaatagggttggaatttttttagactccgaaatgcatgaggtttcgttctacaat
ttgcctgataagtcccttctgtacaggtttagggactgtcctagtggtgcactttggcct
tatttctacactggggaagatgtcaggcccctgaagatctgcacactcaaaaatcctgag
tgtgctgaggccaccaccaacgacaggaagaaggcccaggatggcagagaagcccctgcc
aagcgggatgctaatgagagaaacggggaccagcagttgacagagacgaagaggaggatg
gagaagatgcgtacagcgaacgaggcggctgtgggcaagcaggcagctggaggtggtgag
ggggtgttcatacagaaggcgaaggactgccaggtcagagttcaagatgctgagactggc
ctggaactatccacttcactgccacaaggagcaccttgtgtggctctcactacggccctg
agtatcagagcccttgctctcagagggaactag
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